Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_F13
         (851 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77654-2|CAB01130.1|  308|Caenorhabditis elegans Hypothetical pr...    38   0.009
U72208-1|AAD00182.1|  308|Caenorhabditis elegans inhibitor of ap...    38   0.009
Z74045-2|CAA98553.1|  155|Caenorhabditis elegans Hypothetical pr...    35   0.064
U85911-1|AAB94330.1|  155|Caenorhabditis elegans inhibitor of ap...    35   0.064
AL008869-2|CAC42315.1|  810|Caenorhabditis elegans Hypothetical ...    29   4.2  
AL008869-1|CAA15516.1|  808|Caenorhabditis elegans Hypothetical ...    29   4.2  
AB032749-1|BAA92158.1|  810|Caenorhabditis elegans EAT-20B protein.    29   4.2  
AB032748-1|BAA92157.1|  808|Caenorhabditis elegans EAT-20A protein.    29   4.2  
U41532-4|AAK68320.1|  767|Caenorhabditis elegans Hypothetical pr...    28   7.3  
U41532-3|AAK68319.1|  797|Caenorhabditis elegans Hypothetical pr...    28   7.3  

>Z77654-2|CAB01130.1|  308|Caenorhabditis elegans Hypothetical
           protein C50B8.2 protein.
          Length = 308

 Score = 37.9 bits (84), Expect = 0.009
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = +2

Query: 428 TPEQLARNGFYYLGRGD---EVCCAFCKVEIMRWVEGDDPAADHRRWAPQCPFV 580
           T E+LAR GFY     +      C FC +EI  + + DDP   H+  +P C FV
Sbjct: 45  TSEKLARAGFYSTASPEFPASAKCPFCMLEI-NFEQCDDPWEKHKSGSPHCEFV 97



 Score = 35.1 bits (77), Expect = 0.064
 Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
 Frame = +2

Query: 401 FDQWPVTFLTPEQLARNGFYYLG-RGDEVC--CAFCKVEIMRWVEGDDPAADHRRWAPQC 571
           FD+      T ++LA+ G++ +  + D+    C FC VE+  + E DDP  +H++++  C
Sbjct: 179 FDKKRNVKCTSKKLAKAGWFSIANKKDKTSAKCPFCLVEL-DFDESDDPWEEHQKFSASC 237

Query: 572 PFVR 583
            F++
Sbjct: 238 DFIK 241


>U72208-1|AAD00182.1|  308|Caenorhabditis elegans inhibitor of
           apoptosis homolog protein.
          Length = 308

 Score = 37.9 bits (84), Expect = 0.009
 Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = +2

Query: 428 TPEQLARNGFYYLGRGD---EVCCAFCKVEIMRWVEGDDPAADHRRWAPQCPFV 580
           T E+LAR GFY     +      C FC +EI  + + DDP   H+  +P C FV
Sbjct: 45  TSEKLARAGFYSTASPEFPASAKCPFCMLEI-NFEQCDDPWEKHKSGSPHCEFV 97



 Score = 35.1 bits (77), Expect = 0.064
 Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
 Frame = +2

Query: 401 FDQWPVTFLTPEQLARNGFYYLG-RGDEVC--CAFCKVEIMRWVEGDDPAADHRRWAPQC 571
           FD+      T ++LA+ G++ +  + D+    C FC VE+  + E DDP  +H++++  C
Sbjct: 179 FDKKRNVKCTSKKLAKAGWFSIANKKDKTSAKCPFCLVEL-DFDESDDPWEEHQKFSASC 237

Query: 572 PFVR 583
            F++
Sbjct: 238 DFIK 241


>Z74045-2|CAA98553.1|  155|Caenorhabditis elegans Hypothetical
           protein T27F2.3 protein.
          Length = 155

 Score = 35.1 bits (77), Expect = 0.064
 Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
 Frame = +2

Query: 359 DMPDMRREEERLKTF-----DQWPVTFLTPEQLARNGFYYLGRGDEVCCAFCKVEIMRWV 523
           DM      ++RL TF     D+ P    T + +A+ GFY  G     C AFC  E+    
Sbjct: 10  DMAKFTFYKDRLMTFKNFEYDRDPDAKCTSQAVAQAGFYCTGPQSGKC-AFCNKELDFDP 68

Query: 524 EGDDPAADHRRWAPQCPFVR 583
           E DDP  +H +    C FVR
Sbjct: 69  E-DDPWYEHTKRDEPCEFVR 87


>U85911-1|AAB94330.1|  155|Caenorhabditis elegans inhibitor of
           apoptosis homolog protein.
          Length = 155

 Score = 35.1 bits (77), Expect = 0.064
 Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
 Frame = +2

Query: 359 DMPDMRREEERLKTF-----DQWPVTFLTPEQLARNGFYYLGRGDEVCCAFCKVEIMRWV 523
           DM      ++RL TF     D+ P    T + +A+ GFY  G     C AFC  E+    
Sbjct: 10  DMAKFTFYKDRLMTFKNFEYDRDPDAKCTSQAVAQAGFYCTGPQSGKC-AFCNKELDFDP 68

Query: 524 EGDDPAADHRRWAPQCPFVR 583
           E DDP  +H +    C FVR
Sbjct: 69  E-DDPWYEHTKRDEPCEFVR 87


>AL008869-2|CAC42315.1|  810|Caenorhabditis elegans Hypothetical
           protein H30A04.1b protein.
          Length = 810

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +2

Query: 356 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 454
           P +PD   EEE  +T ++   TF TP   Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572


>AL008869-1|CAA15516.1|  808|Caenorhabditis elegans Hypothetical
           protein H30A04.1a protein.
          Length = 808

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +2

Query: 356 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 454
           P +PD   EEE  +T ++   TF TP   Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572


>AB032749-1|BAA92158.1|  810|Caenorhabditis elegans EAT-20B protein.
          Length = 810

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +2

Query: 356 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 454
           P +PD   EEE  +T ++   TF TP   Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572


>AB032748-1|BAA92157.1|  808|Caenorhabditis elegans EAT-20A protein.
          Length = 808

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +2

Query: 356 PDMPDMRREEERLKTFDQWPVTFLTPE--QLARNG 454
           P +PD   EEE  +T ++   TF TP   Q+A NG
Sbjct: 538 PSVPDENEEEEEEETTEETEETFPTPSTMQVATNG 572


>U41532-4|AAK68320.1|  767|Caenorhabditis elegans Hypothetical
           protein F11D5.3b protein.
          Length = 767

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -2

Query: 637 FVSTDSGRLSPSVGIHLFSYKGTLGRPSPMIGG 539
           F + D G L   +  H FSY G L     + GG
Sbjct: 159 FYNVDQGDLQSGISYHDFSYDGNLANSPHLTGG 191


>U41532-3|AAK68319.1|  797|Caenorhabditis elegans Hypothetical
           protein F11D5.3a protein.
          Length = 797

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -2

Query: 637 FVSTDSGRLSPSVGIHLFSYKGTLGRPSPMIGG 539
           F + D G L   +  H FSY G L     + GG
Sbjct: 189 FYNVDQGDLQSGISYHDFSYDGNLANSPHLTGG 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,376,175
Number of Sequences: 27780
Number of extensions: 381923
Number of successful extensions: 936
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)