Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_F11
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    25   0.85 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    25   0.85 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.85 
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    25   0.85 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    24   1.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   6.0  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   7.9  

>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 344 FFLHGLSVLFNDELSGQSYEL 282
           +FL G   L NDELS  S E+
Sbjct: 130 YFLLGFRYLVNDELSAHSKEI 150


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 344 FFLHGLSVLFNDELSGQSYEL 282
           +FL G   L NDELS  S E+
Sbjct: 444 YFLLGFRYLVNDELSAHSKEI 464


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = -2

Query: 374 LVVQSERFPEFFLHGLSVLFNDELSGQSYELGEFQTTRFVGVDLLNKFLEDFL 216
           LV+ SE+   F    L ++FN  LS ++ E+     +RF  ++   +FL  +L
Sbjct: 154 LVIVSEQEWSFSTGLLVMIFNSALSYKASEIVVMLRSRFAILNKQIRFLNQYL 206


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = -2

Query: 374 LVVQSERFPEFFLHGLSVLFNDELSGQSYELGEFQTTRFVGVDLLNKFLEDFL 216
           LV+ SE+   F    L ++FN  LS ++ E+     +RF  ++   +FL  +L
Sbjct: 172 LVIVSEQEWSFSTGLLVMIFNSALSYKASEIVVMLRSRFAILNKQIRFLNQYL 224


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 7/24 (29%), Positives = 18/24 (75%)
 Frame = -3

Query: 712 INYSLYNTYIILEKLADRYCFVAA 641
           +N++++N Y++L  L D Y ++++
Sbjct: 115 MNFAIFNLYMVLLLLFDAYLWISS 138


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 344 FFLHGLSVLFNDELSGQSYEL 282
           +FL G  +  NDELS  S E+
Sbjct: 677 YFLLGFRLQANDELSAHSKEI 697


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 344 FFLHGLSVLFNDELSGQSYEL 282
           +FL G  +  NDELS  S E+
Sbjct: 677 YFLLGFRLQANDELSAHSKEI 697


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 153 ERLWSKPSKALRRTAICFW 97
           ERLW+ PS  +++T   F+
Sbjct: 546 ERLWTNPSDYVKQTERRFY 564


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 664 RLIFQVLCMYCTNCN*LFLID 726
           +L+F VL  Y T C+   ++D
Sbjct: 304 KLLFGVLAYYSTTCDIATILD 324


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,385
Number of Sequences: 336
Number of extensions: 2645
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)