Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_F09
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    27   0.21 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.5  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   5.9  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -3

Query: 627 QSLTXQLLSAFAHAVRCLAFLGLPYGLINLFLVRVHF 517
           Q +  Q +  F H+VR + FL   +GL+NL     +F
Sbjct: 362 QYVMQQQVKNFRHSVRSVFFLSEIFGLVNLKYRETYF 398


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -1

Query: 71  KYFRIGFHKFDNTHDEVTCSSAG 3
           ++FR+   + DN  D + C+S+G
Sbjct: 47  EWFRLVAGEGDNCRDVIQCTSSG 69


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 62  RIGFHKFDNTHDEVTCSS 9
           +IG  +FD+ HD V+ S+
Sbjct: 48  QIGVKEFDSFHDHVSVSN 65


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 710 DDEDIVELPKPLPKDICE 657
           DDED +E P P+   + E
Sbjct: 479 DDEDAIEKPAPVKISVQE 496


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,165
Number of Sequences: 336
Number of extensions: 3683
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)