Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_F09
(734 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0442 + 14040280-14040371,14040449-14040517,14041217-140413... 199 2e-51
08_02_0433 - 17114880-17114972,17115053-17115149,17115244-171153... 109 4e-37
05_03_0443 + 14057080-14057201,14058566-14058698,14058758-140587... 142 3e-34
01_06_1245 - 35693949-35694038,35694974-35695070,35695170-356952... 139 2e-33
03_06_0198 - 32299480-32299643,32300084-32300126,32300843-323009... 37 0.019
07_03_1297 + 25587445-25587502,25587646-25587740,25588426-255886... 32 0.54
03_05_0434 + 24252994-24253449,24254791-24254877,24255450-242557... 31 1.3
02_05_0615 - 30364956-30365729,30365813-30366286 31 1.3
08_02_0565 + 18751383-18751676,18751739-18751825,18752593-18752895 29 3.8
10_06_0127 - 11027692-11027826,11027925-11027993,11029925-110300... 29 5.1
05_03_0519 + 14951605-14952333 29 5.1
07_01_0253 + 1888831-1889399,1890121-1890526,1890980-1891195,189... 28 6.7
03_05_0493 + 24879554-24879674,24880272-24880339,24880761-24880811 28 6.7
09_02_0586 + 10948079-10948283,10948506-10948615 28 8.8
>05_03_0442 +
14040280-14040371,14040449-14040517,14041217-14041329,
14043110-14043209,14044508-14044682,14044768-14044881,
14045157-14045287,14048401-14048464,14048585-14048624,
14049002-14049225,14049634-14049876,14050145-14050313,
14050569-14050873,14051325-14051511,14051622-14051775,
14052145-14052207,14052300-14052396,14052500-14052589
Length = 809
Score = 199 bits (486), Expect = 2e-51
Identities = 93/152 (61%), Positives = 125/152 (82%)
Frame = +1
Query: 112 KMVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQ 291
KMV++AA++ +KSGKALVSRQFV+M++ RIEGLLAAFPKL+ G+QHT+VETE+VRYVYQ
Sbjct: 285 KMVVLAASIISKSGKALVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQ 344
Query: 292 PLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVAL 471
P++ LY+LLIT K SNILEDL+TLRL S++VPEY L E V AF L+FAFDE ++L
Sbjct: 345 PIEGLYLLLITNKQSNILEDLDTLRLLSKLVPEYSPSLDEEGVCKTAFELIFAFDEAISL 404
Query: 472 GYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQ 567
G +E+V + QV+ + EM+SHEEK ++ + Q++
Sbjct: 405 GNKENVTVQQVKQYCEMESHEEKAHKLMMQSK 436
>08_02_0433 -
17114880-17114972,17115053-17115149,17115244-17115306,
17115765-17115918,17115992-17116178,17116567-17116871,
17117638-17117803,17118261-17118652,17119032-17119208,
17119565-17119604,17119762-17119809,17122393-17122428,
17122832-17123104
Length = 676
Score = 109 bits (262), Expect(2) = 4e-37
Identities = 51/87 (58%), Positives = 71/87 (81%)
Frame = +1
Query: 118 VLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQPL 297
V++AA++ +KSGKALVSRQ+V+MT+ RIEGLLAAFPKL+ G+QHT++ETE+VRYVYQP+
Sbjct: 120 VVLAASIISKSGKALVSRQYVDMTRIRIEGLLAAFPKLVGNGKQHTYIETENVRYVYQPI 179
Query: 298 DKLYMLLITTKASNILEDLETLRLFSR 378
+ LY+++IT K N+ L T + R
Sbjct: 180 EGLYLVVITNK-QNLHSPLTTKGVICR 205
Score = 63.7 bits (148), Expect(2) = 4e-37
Identities = 31/67 (46%), Positives = 42/67 (62%)
Frame = +1
Query: 361 LRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEK 540
L L + VPEYC L + V AF L+FAFDE ++LG +E V + QV+ + EMDS EE
Sbjct: 235 LNLNNVKVPEYCPSLDDDGVCKTAFELIFAFDEAISLGNKEKVTVQQVKEYCEMDSVEEM 294
Query: 541 IYQAVRQ 561
Y+ + Q
Sbjct: 295 EYKQMMQ 301
>05_03_0443 +
14057080-14057201,14058566-14058698,14058758-14058797,
14059175-14059398,14059904-14059976,14060364-14060614,
14060892-14061060,14061307-14061611,14062023-14062209,
14062311-14062464,14063186-14063248,14063337-14063433,
14063530-14063619
Length = 635
Score = 142 bits (343), Expect = 3e-34
Identities = 84/178 (47%), Positives = 121/178 (67%), Gaps = 27/178 (15%)
Frame = +1
Query: 115 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 294
+V++AA++ +KSGKALVSRQFV+M++ RIEGLLAAFPKL+ G+QHT+VETE+VRYVYQP
Sbjct: 85 LVVLAASIISKSGKALVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 144
Query: 295 LDKLYMLLITTKASNILEDLETLRLFSRVVPE--------YCV------------QLTE- 411
++ LY+LLIT K SNILEDL+TLRL S++ +C+ Q+ E
Sbjct: 145 IEGLYLLLITNKQSNILEDLDTLRLLSKLALRAVSTEATLWCLAGALVLQVFLFPQVPEY 204
Query: 412 TEVLNQAFNLLFAFDEIVA------LGYRESVNLAQVRSFVEMDSHEEKIYQAVRQTQ 567
+ L++ AF+ I A LG +E+V + QV+ + EM+SHEEK ++ + Q++
Sbjct: 205 SPSLDEEGVCKTAFELIFAFDEAICLGNKENVTVQQVKQYCEMESHEEKAHKLMMQSK 262
>01_06_1245 -
35693949-35694038,35694974-35695070,35695170-35695232,
35696079-35696232,35696303-35696489,35697001-35697314,
35698079-35698220,35698445-35698656,35699068-35699244,
35699589-35699628,35700056-35700155,35701731-35701804
Length = 549
Score = 139 bits (336), Expect = 2e-33
Identities = 74/151 (49%), Positives = 105/151 (69%)
Frame = +1
Query: 115 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGGRQHTFVETESVRYVYQP 294
+V++AA++ +KSGKALVSRQFV+M++ RI+GLLAAFPKL+ G+QHT+VETE+VRYVYQP
Sbjct: 58 LVVLAASIISKSGKALVSRQFVDMSRIRIDGLLAAFPKLVGSGKQHTYVETENVRYVYQP 117
Query: 295 LDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALG 474
++ LY+LLIT K + C AF LLFAF E ++LG
Sbjct: 118 IEALYLLLITNKQKGV-----------------C---------KAAFELLFAFIEAISLG 151
Query: 475 YRESVNLAQVRSFVEMDSHEEKIYQAVRQTQ 567
+E+V +AQV+ + EM+SHEEK+++ V Q++
Sbjct: 152 NKENVTVAQVKQYCEMESHEEKLHKLVMQSK 182
>03_06_0198 -
32299480-32299643,32300084-32300126,32300843-32300929,
32301063-32301098,32301187-32301295,32301408-32301499,
32302029-32302115,32303887-32304222
Length = 317
Score = 36.7 bits (81), Expect = 0.019
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Frame = +1
Query: 142 TKSGKALVSRQFVEMT-KARIEGLLAAFPKLMTGG-RQHTFVETESVRYVYQPLDKLYML 315
++ GK +++ + T K R + + ++T G + FVE + + VY+ LY
Sbjct: 120 SRQGKVRLTKWYSPYTQKERTKVIRELSGLILTRGPKLCNFVEWKGYKVVYRRYASLYFC 179
Query: 316 LITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLFAFDEIVALG 474
+ N LE LE + F V+ Y + E +++ + DEI+ G
Sbjct: 180 MCIDAEDNELEVLEIIHHFVEVLDRYFGSVCELDLIFNFHKAYYILDEILIAG 232
>07_03_1297 +
25587445-25587502,25587646-25587740,25588426-25588629,
25588843-25588959,25589084-25589212,25589591-25589717,
25590174-25590277,25590369-25590473,25590969-25591190,
25591869-25591967
Length = 419
Score = 31.9 bits (69), Expect = 0.54
Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 268 ESVRYVYQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLNQAFNLLF 447
+ V Y++ + L+ ++ T + LE L+ +RV +Y L E + L + F L++
Sbjct: 54 DGVNYIHVKVAGLFFVVTTMVNVSPSLLLELLQRIARVTKDYLGVLNE-DSLRKNFILVY 112
Query: 448 AF-DEIVALGYRESVNLAQVRSFV 516
DE++ GY ++ + ++S++
Sbjct: 113 ELLDEVIDFGYPQTTSTEVLKSYI 136
>03_05_0434 +
24252994-24253449,24254791-24254877,24255450-24255748,
24256146-24256383,24256907-24257441,24257527-24257729,
24258311-24258520
Length = 675
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = -1
Query: 428 WFKTSVSVSCTQYSGTTLLKSLNVSRSSRMLLAFVVISNIYNLSSGW*TYLTDSVSTNVC 249
W S+ + + G + + N+S + LL+ VV + + +SGW +++D +C
Sbjct: 225 WVVESMEIMLLSFVGPLVREEWNISAENESLLSSVVFAGMLIGASGW-GFVSDKYGRRIC 283
>02_05_0615 - 30364956-30365729,30365813-30366286
Length = 415
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 115 MVLIAATVCTKSGKALVSRQFVEMTKARIEGLLAAFPKLMTGG 243
++L+A TVC S L +RQ+++ T AR A++ GG
Sbjct: 22 LLLVAFTVCNYSSLKLSTRQYIDGTSARSSSTRASYASGGGGG 64
>08_02_0565 + 18751383-18751676,18751739-18751825,18752593-18752895
Length = 227
Score = 29.1 bits (62), Expect = 3.8
Identities = 25/108 (23%), Positives = 46/108 (42%)
Frame = +1
Query: 223 PKLMTGGRQHTFVETESVRYVYQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQ 402
P L +G Q +FVE + + VY+ L+ L+ N L LE + LF + +
Sbjct: 90 PVLGSGSVQCSFVEHRNYKVVYRRYASLFFLVGVDNDENELAILEFIHLFVETMDRHFGN 149
Query: 403 LTETEVLNQAFNLLFAFDEIVALGYRESVNLAQVRSFVEMDSHEEKIY 546
+ N F+ + I +G + N + +++ H EK++
Sbjct: 150 VVFFSNPNNYFSCDCKYAHIYHMGQADG-NYPFGQCELDIMFHLEKVH 196
>10_06_0127 -
11027692-11027826,11027925-11027993,11029925-11030011,
11030146-11030286
Length = 143
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = +1
Query: 247 QHTFVETESVRYVYQPLDKLYMLLITTKASNILEDLETLRLFSRVVPEYCVQLTETEVLN 426
Q +FVE + + VY+ L+ L+ N L LE + L + + + E +++
Sbjct: 47 QCSFVEHRNYKVVYRRYASLFFLVGVDNDENELAILEFIHLLVETMDRHFGNVCELDIMF 106
Query: 427 QAFNLLFAFDEIVALG 474
+ F +E+V G
Sbjct: 107 HLEKVHFMLEEMVMNG 122
>05_03_0519 + 14951605-14952333
Length = 242
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 244 RQHTFVETESVRYVYQPLDKLYML 315
R HTF++ ESVR+V + D Y+L
Sbjct: 74 RIHTFIQRESVRHVIEIQDACYVL 97
>07_01_0253 +
1888831-1889399,1890121-1890526,1890980-1891195,
1891441-1891548,1892085-1892359,1892462-1892714
Length = 608
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Frame = +1
Query: 28 SCVLSNLWKPILKYFGVFYEN*I*EYKNKMVLIAATV-CTKSGKALVSR-QFVEMTKAR- 198
+C + WKP++KY +++ N + +M+++ T+ C + + QF++ R
Sbjct: 351 ACSIEERWKPLVKY--LYHLNISRDGMKRMLVVQPTIFCLDLETVIAPKVQFLQDIGVRS 408
Query: 199 --IEGLLAAFPKLMT 237
+ G+L FP ++T
Sbjct: 409 DAVGGVLVKFPPVLT 423
>03_05_0493 + 24879554-24879674,24880272-24880339,24880761-24880811
Length = 79
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +2
Query: 320 SRQRLVTSWKIWRH*DSSAEWYQNIVYSSQKLKS*TRPSICYLLSTRLSLLG 475
S L TSW +W + S W + VY ++KS TR L ++LLG
Sbjct: 26 SSSSLPTSWGVWANLGSINTW-EKCVYGDSEIKS-TRNGKVQLGIEHMNLLG 75
>09_02_0586 + 10948079-10948283,10948506-10948615
Length = 104
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/61 (31%), Positives = 22/61 (36%)
Frame = -2
Query: 646 GHVWPPPISHXATP*RVRACGSLPRVLGSALRLDKSFPRESPFQQTNGPALD*RFLCTQE 467
GH WPPP+ +T RV G ALR R P + R LC
Sbjct: 42 GHDWPPPVKDDSTACRVDVVPYPGHQQGLALRQCGQCDRTGPPKYVYYVTKPDRLLCALR 101
Query: 466 R 464
R
Sbjct: 102 R 102
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,206,167
Number of Sequences: 37544
Number of extensions: 419797
Number of successful extensions: 1253
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -