Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_F03
         (849 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    25   2.2  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.9  
DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    25   3.8  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   3.8  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   6.7  

>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +2

Query: 404 TKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNE 553
           T+KKN S   Q+   +W+ E  L  E   +   +    +RR+  A+A NE
Sbjct: 48  TRKKNESLQEQLTQLRWLMEEKL-REQREDAQRREEEARRREEAAKADNE 96


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = -1

Query: 582  KERLLCKISFSFKASAKA---FLLFSATTFQ*VSEGTSRHKSFSEIH 451
            KERLL  +SFS   S+ A   F+ FS   FQ     T+++ +  +++
Sbjct: 1423 KERLLMFLSFSPYVSSSAFFEFIPFSGKQFQMCFSATNQYPNMPKLN 1469


>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +2

Query: 386 SPRNIVTKKKNSSKSIQVNLDKW--ISENDLCLEVPSETYWKV 508
           SP +IVT K  +S  +Q N  +W  + EN   L  P    W+V
Sbjct: 29  SPVDIVTSKTQNSGDLQENPLRWTYVPENTRSLVNPGYC-WRV 70


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
 Frame = -1

Query: 423 DEFFFLVTIFLGLKY-SLMLP------FFRPANKSLSTDFSIVVAVFEFILL 289
           D F   + +FLG    S++L       FF    +   +DFS+ +A+F   LL
Sbjct: 723 DVFLMSIVLFLGTYIISVILKDFKNALFFPAVVRQFISDFSVTIAIFSMTLL 774


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +2

Query: 515 EKRRKA-LAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKEL 658
           E RRK   A++  + E L + L +L   NLK K    +   F+ +C E+
Sbjct: 287 EARRKMNRAKSSEQREDLRR-LYILARSNLKRKIKASKRRCFLALCDEV 334


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,133
Number of Sequences: 2352
Number of extensions: 10449
Number of successful extensions: 54
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)