Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_F03
(849 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC005389-1|AAH05389.1| 209|Homo sapiens geminin, DNA replicatio... 56 2e-07
BC005185-1|AAH05185.1| 209|Homo sapiens geminin, DNA replicatio... 56 2e-07
AL133264-4|CAC21511.1| 205|Homo sapiens RP3-369A17.3 protein. 56 2e-07
AK222992-1|BAD96712.1| 208|Homo sapiens geminin variant protein. 56 2e-07
AF067855-1|AAC39787.1| 209|Homo sapiens geminin protein. 56 2e-07
U76638-1|AAB38316.1| 777|Homo sapiens BRCA1-associated RING dom... 33 1.3
BC126428-1|AAI26429.1| 777|Homo sapiens BRCA1 associated RING d... 33 1.3
BC126426-1|AAI26427.1| 777|Homo sapiens BRCA1 associated RING d... 33 1.3
AK223409-1|BAD97129.1| 777|Homo sapiens BRCA1 associated RING d... 33 1.3
AF038042-1|AAB99978.1| 777|Homo sapiens BRCA1-associated RING d... 33 1.3
AC016708-1|AAX93130.1| 777|Homo sapiens unknown protein. 33 1.3
AF111782-1|AAD29948.1| 1938|Homo sapiens myosin heavy chain prot... 32 2.3
EF041819-1|ABL09300.1| 782|Homo sapiens several ankyrin repeat ... 31 7.0
DQ508815-1|ABF60230.1| 593|Homo sapiens SARP protein. 31 7.0
BC062729-1|AAH62729.1| 258|Homo sapiens ANKRD42 protein protein. 31 7.0
>BC005389-1|AAH05389.1| 209|Homo sapiens geminin, DNA replication
inhibitor protein.
Length = 209
Score = 56.0 bits (129), Expect = 2e-07
Identities = 33/70 (47%), Positives = 38/70 (54%)
Frame = +2
Query: 404 TKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSL 583
++ KN Q + D I EN PS YWK VAEKRRKAL EAL ENE LHK +
Sbjct: 73 SENKNLGGVTQESFDLMIKEN------PSSQYWKEVAEKRRKALYEALKENEKLHKEIEQ 126
Query: 584 LTEENLKYKK 613
E + KK
Sbjct: 127 KDNEIARLKK 136
>BC005185-1|AAH05185.1| 209|Homo sapiens geminin, DNA replication
inhibitor protein.
Length = 209
Score = 56.0 bits (129), Expect = 2e-07
Identities = 33/70 (47%), Positives = 38/70 (54%)
Frame = +2
Query: 404 TKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSL 583
++ KN Q + D I EN PS YWK VAEKRRKAL EAL ENE LHK +
Sbjct: 73 SENKNLGGVTQESFDLMIKEN------PSSQYWKEVAEKRRKALYEALKENEKLHKEIEQ 126
Query: 584 LTEENLKYKK 613
E + KK
Sbjct: 127 KDNEIARLKK 136
>AL133264-4|CAC21511.1| 205|Homo sapiens RP3-369A17.3 protein.
Length = 205
Score = 56.0 bits (129), Expect = 2e-07
Identities = 33/70 (47%), Positives = 38/70 (54%)
Frame = +2
Query: 404 TKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSL 583
++ KN Q + D I EN PS YWK VAEKRRKAL EAL ENE LHK +
Sbjct: 69 SENKNLGGVTQESFDLMIKEN------PSSQYWKEVAEKRRKALYEALKENEKLHKEIEQ 122
Query: 584 LTEENLKYKK 613
E + KK
Sbjct: 123 KDNEIARLKK 132
>AK222992-1|BAD96712.1| 208|Homo sapiens geminin variant protein.
Length = 208
Score = 56.0 bits (129), Expect = 2e-07
Identities = 33/70 (47%), Positives = 38/70 (54%)
Frame = +2
Query: 404 TKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSL 583
++ KN Q + D I EN PS YWK VAEKRRKAL EAL ENE LHK +
Sbjct: 72 SENKNLGGVTQESFDLMIKEN------PSSQYWKEVAEKRRKALYEALKENEKLHKEIEQ 125
Query: 584 LTEENLKYKK 613
E + KK
Sbjct: 126 KDNEIARLKK 135
>AF067855-1|AAC39787.1| 209|Homo sapiens geminin protein.
Length = 209
Score = 56.0 bits (129), Expect = 2e-07
Identities = 33/70 (47%), Positives = 38/70 (54%)
Frame = +2
Query: 404 TKKKNSSKSIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSL 583
++ KN Q + D I EN PS YWK VAEKRRKAL EAL ENE LHK +
Sbjct: 73 SENKNLGGVTQESFDLMIKEN------PSSQYWKEVAEKRRKALYEALKENEKLHKEIEQ 126
Query: 584 LTEENLKYKK 613
E + KK
Sbjct: 127 KDNEIARLKK 136
>U76638-1|AAB38316.1| 777|Homo sapiens BRCA1-associated RING domain
protein protein.
Length = 777
Score = 33.1 bits (72), Expect = 1.3
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = +2
Query: 350 AGRKKGSIKEYFSPRNIVTKKKNSSKSIQVN--LDKWISENDLCLEVPSETYWKVVAEKR 523
AG KK SIK +FSPR+ + S S+Q + K S E S + V+E+
Sbjct: 136 AGNKKNSIKMWFSPRSKKVRYVVSKASVQTQPAIKKDASAQQDSYEFVSPSPPADVSERA 195
Query: 524 RKALAEALNENEILHKSLSLLTEE-NLKYKKLLDEANSFIEVCKELMS 664
+KA A + + + K+L+ + ++ NL+ +K E +S E ++L+S
Sbjct: 196 KKASARSGKKQK--KKTLAEINQKWNLEAEKEDGEFDSKEESKQKLVS 241
>BC126428-1|AAI26429.1| 777|Homo sapiens BRCA1 associated RING
domain 1 protein.
Length = 777
Score = 33.1 bits (72), Expect = 1.3
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = +2
Query: 350 AGRKKGSIKEYFSPRNIVTKKKNSSKSIQVN--LDKWISENDLCLEVPSETYWKVVAEKR 523
AG KK SIK +FSPR+ + S S+Q + K S E S + V+E+
Sbjct: 136 AGNKKNSIKMWFSPRSKKVRYVVSKASVQTQPAIKKDASAQQDSYEFVSPSPPADVSERA 195
Query: 524 RKALAEALNENEILHKSLSLLTEE-NLKYKKLLDEANSFIEVCKELMS 664
+KA A + + + K+L+ + ++ NL+ +K E +S E ++L+S
Sbjct: 196 KKASARSGKKQK--KKTLAEINQKWNLEAEKEDGEFDSKEESKQKLVS 241
>BC126426-1|AAI26427.1| 777|Homo sapiens BRCA1 associated RING
domain 1 protein.
Length = 777
Score = 33.1 bits (72), Expect = 1.3
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = +2
Query: 350 AGRKKGSIKEYFSPRNIVTKKKNSSKSIQVN--LDKWISENDLCLEVPSETYWKVVAEKR 523
AG KK SIK +FSPR+ + S S+Q + K S E S + V+E+
Sbjct: 136 AGNKKNSIKMWFSPRSKKVRYVVSKASVQTQPAIKKDASAQQDSYEFVSPSPPADVSERA 195
Query: 524 RKALAEALNENEILHKSLSLLTEE-NLKYKKLLDEANSFIEVCKELMS 664
+KA A + + + K+L+ + ++ NL+ +K E +S E ++L+S
Sbjct: 196 KKASARSGKKQK--KKTLAEINQKWNLEAEKEDGEFDSKEESKQKLVS 241
>AK223409-1|BAD97129.1| 777|Homo sapiens BRCA1 associated RING
domain 1 variant protein.
Length = 777
Score = 33.1 bits (72), Expect = 1.3
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = +2
Query: 350 AGRKKGSIKEYFSPRNIVTKKKNSSKSIQVN--LDKWISENDLCLEVPSETYWKVVAEKR 523
AG KK SIK +FSPR+ + S S+Q + K S E S + V+E+
Sbjct: 136 AGNKKNSIKMWFSPRSKKVRYVVSKASVQTQPAIKKDASAQQDSYEFVSPSPPADVSERA 195
Query: 524 RKALAEALNENEILHKSLSLLTEE-NLKYKKLLDEANSFIEVCKELMS 664
+KA A + + + K+L+ + ++ NL+ +K E +S E ++L+S
Sbjct: 196 KKASARSGKKQK--KKTLAEINQKWNLEAEKEDGEFDSKEESKQKLVS 241
>AF038042-1|AAB99978.1| 777|Homo sapiens BRCA1-associated RING
domain protein protein.
Length = 777
Score = 33.1 bits (72), Expect = 1.3
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = +2
Query: 350 AGRKKGSIKEYFSPRNIVTKKKNSSKSIQVN--LDKWISENDLCLEVPSETYWKVVAEKR 523
AG KK SIK +FSPR+ + S S+Q + K S E S + V+E+
Sbjct: 136 AGNKKNSIKMWFSPRSKKVRYVVSKASVQTQPAIKKDASAQQDSYEFVSPSPPADVSERA 195
Query: 524 RKALAEALNENEILHKSLSLLTEE-NLKYKKLLDEANSFIEVCKELMS 664
+KA A + + + K+L+ + ++ NL+ +K E +S E ++L+S
Sbjct: 196 KKASARSGKKQK--KKTLAEINQKWNLEAEKEDGEFDSKEESKQKLVS 241
>AC016708-1|AAX93130.1| 777|Homo sapiens unknown protein.
Length = 777
Score = 33.1 bits (72), Expect = 1.3
Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = +2
Query: 350 AGRKKGSIKEYFSPRNIVTKKKNSSKSIQVN--LDKWISENDLCLEVPSETYWKVVAEKR 523
AG KK SIK +FSPR+ + S S+Q + K S E S + V+E+
Sbjct: 136 AGNKKNSIKMWFSPRSKKVRYVVSKASVQTQPAIKKDASAQQDSYEFVSPSPPADVSERA 195
Query: 524 RKALAEALNENEILHKSLSLLTEE-NLKYKKLLDEANSFIEVCKELMS 664
+KA A + + + K+L+ + ++ NL+ +K E +S E ++L+S
Sbjct: 196 KKASARSGKKQK--KKTLAEINQKWNLEAEKEDGEFDSKEESKQKLVS 241
>AF111782-1|AAD29948.1| 1938|Homo sapiens myosin heavy chain protein.
Length = 1938
Score = 32.3 bits (70), Expect = 2.3
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Frame = +2
Query: 323 LKSVDKDLLAGRKKGSIKEYFS-PRNIVTKKKNSSKSIQVNLDKWISE-NDLCLEVPSET 496
+K + K A ++ ++KE F + + + + K ++ + + E NDL L+V SET
Sbjct: 840 IKPLLKSAEAEKEMATMKEDFERTKEELARSEARRKELEEKMVSLLQEKNDLQLQVQSET 899
Query: 497 YWKVVAEKRRKALAEALNENEILHKSLS-LLTEENLKYKKLLDEANSFIEVCKELMSDTA 673
+ AE+R + L ++ E K L+ L EE +L+ + + + C L D
Sbjct: 900 ENLMDAEERCEGLIKSKILLEAKVKELTERLEEEEEMNSELVAKKRNLEDKCSSLKRDID 959
Query: 674 DDTGIEIDDTKI 709
D +E+ TK+
Sbjct: 960 D---LELTLTKV 968
>EF041819-1|ABL09300.1| 782|Homo sapiens several ankyrin repeat
protein transcript variant 2 protein.
Length = 782
Score = 30.7 bits (66), Expect = 7.0
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +2
Query: 458 SENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKK 613
+++DLCL +T ++ A K+ L L E +K L +TEE+LK KK
Sbjct: 647 AKDDLCLSDLDKTDARMRAYKKIVELRHLLEIAESNYKHLGGITEEDLKQKK 698
>DQ508815-1|ABF60230.1| 593|Homo sapiens SARP protein.
Length = 593
Score = 30.7 bits (66), Expect = 7.0
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +2
Query: 458 SENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKK 613
+++DLCL +T ++ A K+ L L E +K L +TEE+LK KK
Sbjct: 474 AKDDLCLSDLDKTDARMRAYKKIVELRHLLEIAESNYKHLGGITEEDLKQKK 525
>BC062729-1|AAH62729.1| 258|Homo sapiens ANKRD42 protein protein.
Length = 258
Score = 30.7 bits (66), Expect = 7.0
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +2
Query: 458 SENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKK 613
+++DLCL +T ++ A K+ L L E +K L +TEE+LK KK
Sbjct: 123 AKDDLCLSDLDKTDARMRAYKKIVELRHLLEIAESNYKHLGGITEEDLKQKK 174
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,746,438
Number of Sequences: 237096
Number of extensions: 1430305
Number of successful extensions: 7056
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7056
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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