Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_F03
         (849 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095203-1|AAM12296.1|  192|Drosophila melanogaster RE66227p pro...    66   8e-11
AF407275-1|AAK96219.1|  192|Drosophila melanogaster geminin prot...    66   8e-11
AE013599-188|AAF57366.1|  192|Drosophila melanogaster CG3183-PA ...    66   8e-11
BT021952-1|AAX51657.1|  899|Drosophila melanogaster GH01093p pro...    29   6.1  
AE014297-1303|AAF54641.1|  533|Drosophila melanogaster CG31374-P...    29   6.1  
AE014297-1302|AAO41543.1|  935|Drosophila melanogaster CG31374-P...    29   6.1  
AE014297-1301|AAF54642.2|  935|Drosophila melanogaster CG31374-P...    29   6.1  

>AY095203-1|AAM12296.1|  192|Drosophila melanogaster RE66227p
           protein.
          Length = 192

 Score = 65.7 bits (153), Expect = 8e-11
 Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
 Frame = +2

Query: 440 NLDKWISENDLCLEV-PSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKL 616
           N DK I+  DL     P E Y+K++AE+RR AL ++L EN  LH+ +  L EE    ++ 
Sbjct: 97  NADKPITAEDLTSTAEPGENYYKLLAEQRRLALEDSLTENRHLHERIEGLEEEMDTMRQE 156

Query: 617 LDEANSFIEVCKELMSDTADDTGIEIDDT 703
           LDEA + +EV KE+  +  D++ +E DDT
Sbjct: 157 LDEAKNLVEVLKEICEE--DNSEVEEDDT 183


>AF407275-1|AAK96219.1|  192|Drosophila melanogaster geminin
           protein.
          Length = 192

 Score = 65.7 bits (153), Expect = 8e-11
 Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
 Frame = +2

Query: 440 NLDKWISENDLCLEV-PSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKL 616
           N DK I+  DL     P E Y+K++AE+RR AL ++L EN  LH+ +  L EE    ++ 
Sbjct: 97  NADKPITAEDLTSTAEPGENYYKLLAEQRRLALEDSLTENRHLHERIEGLEEEMDTMRQE 156

Query: 617 LDEANSFIEVCKELMSDTADDTGIEIDDT 703
           LDEA + +EV KE+  +  D++ +E DDT
Sbjct: 157 LDEAKNLVEVLKEICEE--DNSEVEEDDT 183


>AE013599-188|AAF57366.1|  192|Drosophila melanogaster CG3183-PA
           protein.
          Length = 192

 Score = 65.7 bits (153), Expect = 8e-11
 Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
 Frame = +2

Query: 440 NLDKWISENDLCLEV-PSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKKL 616
           N DK I+  DL     P E Y+K++AE+RR AL ++L EN  LH+ +  L EE    ++ 
Sbjct: 97  NADKPITAEDLTSTAEPGENYYKLLAEQRRLALEDSLTENRHLHERIEGLEEEMDTMRQE 156

Query: 617 LDEANSFIEVCKELMSDTADDTGIEIDDT 703
           LDEA + +EV KE+  +  D++ +E DDT
Sbjct: 157 LDEAKNLVEVLKEICEE--DNSEVEEDDT 183


>BT021952-1|AAX51657.1|  899|Drosophila melanogaster GH01093p
           protein.
          Length = 899

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 21/63 (33%), Positives = 33/63 (52%)
 Frame = +2

Query: 512 AEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGIE 691
           A+K + AL +A+ +N+      S+L EEN K+KKL  E     ++   +  D  D  G E
Sbjct: 740 AKKEKDALKQAMKKNQ------SILKEENKKFKKLEKEVQ---KMAASMKLDEDDVDGEE 790

Query: 692 IDD 700
            D+
Sbjct: 791 KDE 793


>AE014297-1303|AAF54641.1|  533|Drosophila melanogaster CG31374-PA,
           isoform A protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 21/63 (33%), Positives = 33/63 (52%)
 Frame = +2

Query: 512 AEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGIE 691
           A+K + AL +A+ +N+      S+L EEN K+KKL  E     ++   +  D  D  G E
Sbjct: 374 AKKEKDALKQAMKKNQ------SILKEENKKFKKLEKEVQ---KMAASMKLDEDDVDGEE 424

Query: 692 IDD 700
            D+
Sbjct: 425 KDE 427


>AE014297-1302|AAO41543.1|  935|Drosophila melanogaster CG31374-PC,
           isoform C protein.
          Length = 935

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 21/63 (33%), Positives = 33/63 (52%)
 Frame = +2

Query: 512 AEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGIE 691
           A+K + AL +A+ +N+      S+L EEN K+KKL  E     ++   +  D  D  G E
Sbjct: 776 AKKEKDALKQAMKKNQ------SILKEENKKFKKLEKEVQ---KMAASMKLDEDDVDGEE 826

Query: 692 IDD 700
            D+
Sbjct: 827 KDE 829


>AE014297-1301|AAF54642.2|  935|Drosophila melanogaster CG31374-PB,
           isoform B protein.
          Length = 935

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 21/63 (33%), Positives = 33/63 (52%)
 Frame = +2

Query: 512 AEKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGIE 691
           A+K + AL +A+ +N+      S+L EEN K+KKL  E     ++   +  D  D  G E
Sbjct: 776 AKKEKDALKQAMKKNQ------SILKEENKKFKKLEKEVQ---KMAASMKLDEDDVDGEE 826

Query: 692 IDD 700
            D+
Sbjct: 827 KDE 829


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,952,531
Number of Sequences: 53049
Number of extensions: 448355
Number of successful extensions: 1369
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1369
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)