Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_F03
(849 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81589-1|CAB04717.1| 272|Caenorhabditis elegans Hypothetical pr... 32 0.59
U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical pr... 32 0.59
Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical p... 29 4.2
Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF034078-1|AAC02976.1| 815|Caenorhabditis elegans putative E1-E... 29 4.2
Z68299-7|CAJ90495.1| 269|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z68299-6|CAA92610.2| 412|Caenorhabditis elegans Hypothetical pr... 29 5.5
AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical ... 29 5.5
Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical pr... 28 9.6
AF039048-10|AAB94240.2| 421|Caenorhabditis elegans Hypothetical... 28 9.6
>Z81589-1|CAB04717.1| 272|Caenorhabditis elegans Hypothetical
protein T08G5.1 protein.
Length = 272
Score = 31.9 bits (69), Expect = 0.59
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +2
Query: 305 NTATTILKSVDKDLLAGRKKGSIKEYFSPRNIVTKKKNSSKSIQVNLD 448
NT+T+ ++D+ R SIK + PRNI + ++ S+ I+V+ D
Sbjct: 136 NTSTSRNTQNNEDVTVLRNFNSIKHHQKPRNIAYRPRHHSRKIRVHQD 183
>U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical
protein F56D1.1 protein.
Length = 468
Score = 31.9 bits (69), Expect = 0.59
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +2
Query: 272 EHSGEESKINSNTATTILKSVDKDLLAGRKK--GSIKEYFSPRNIVTKKKNSSKSIQVNL 445
E G + NS ++ V+K+ +A RK+ G K+ F P KK ++ ++
Sbjct: 39 EEDGNSERSNSKVCIEEVEEVEKEEIASRKRKRGKTKDEFHPCPFCEKKFRYPNKLREHI 98
Query: 446 DKWISENDLCLEVPSETYWKVVAEKR 523
S CLE + T + E R
Sbjct: 99 KIHDSNRYQCLECSTITKFGTYGELR 124
>Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical
protein C33D9.8 protein.
Length = 604
Score = 29.5 bits (63), Expect = 3.2
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Frame = +2
Query: 410 KKNSSKSIQVNLDKWISENDLCLEV--PSETYWKVVAEKRRKALAEALNENEILHKSLSL 583
K + S ++ L + S+ +L +E ET W+V + L E E + + + L
Sbjct: 216 KMDPSSTMNEELTELRSQMNLIIEYNEKQETVWQVKLSEASAQLNEKDLVIEKITRKIEL 275
Query: 584 LTEENLKYKKLLDEANSFIE---VCKELMSDTAD 676
L E N+K + + E E CK L DT +
Sbjct: 276 LQENNVKKDQRIYELEQCFESEDYCKILQKDTKE 309
>Z98866-10|CAE54923.1| 1089|Caenorhabditis elegans Hypothetical
protein Y49E10.11b protein.
Length = 1089
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/77 (22%), Positives = 32/77 (41%)
Frame = +2
Query: 428 SIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKY 607
+I+ L +W+ E L W + +KR A+ A + + H + LL + Y
Sbjct: 622 AIEDKLQEWVPETIQALMAADIRVWMLTGDKRETAINIA-HSCALCHTNTELLIVDKTTY 680
Query: 608 KKLLDEANSFIEVCKEL 658
++ + F+ EL
Sbjct: 681 EETYQKLEQFVARAIEL 697
>Z98866-9|CAB11550.4| 1139|Caenorhabditis elegans Hypothetical
protein Y49E10.11a protein.
Length = 1139
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/77 (22%), Positives = 32/77 (41%)
Frame = +2
Query: 428 SIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKY 607
+I+ L +W+ E L W + +KR A+ A + + H + LL + Y
Sbjct: 622 AIEDKLQEWVPETIQALMAADIRVWMLTGDKRETAINIA-HSCALCHTNTELLIVDKTTY 680
Query: 608 KKLLDEANSFIEVCKEL 658
++ + F+ EL
Sbjct: 681 EETYQKLEQFVARAIEL 697
>AF034078-1|AAC02976.1| 815|Caenorhabditis elegans putative E1-E2
ATPase protein.
Length = 815
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/77 (22%), Positives = 32/77 (41%)
Frame = +2
Query: 428 SIQVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKY 607
+I+ L +W+ E L W + +KR A+ A + + H + LL + Y
Sbjct: 298 AIEDKLQEWVPETIQALMAADIRVWMLTGDKRETAINIA-HSCALCHTNTELLIVDKTTY 356
Query: 608 KKLLDEANSFIEVCKEL 658
++ + F+ EL
Sbjct: 357 EETYQKLEQFVARAIEL 373
>Z68299-7|CAJ90495.1| 269|Caenorhabditis elegans Hypothetical
protein T04B2.3b protein.
Length = 269
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 455 ISENDLCLEVPSETYWKVVA-EKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEAN 631
+ NDL P T ++ + A+A+NEN +LH+S T E+L A
Sbjct: 33 VEHNDLSGSCPDLTAQQIQKWDDYLYETAKAVNENGVLHESTGERTSEDLSSSVYEVAAP 92
Query: 632 SFIEVCKELMSDTAD 676
+E + +S T++
Sbjct: 93 GIMETLTQTISGTSN 107
>Z68299-6|CAA92610.2| 412|Caenorhabditis elegans Hypothetical
protein T04B2.3a protein.
Length = 412
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 455 ISENDLCLEVPSETYWKVVA-EKRRKALAEALNENEILHKSLSLLTEENLKYKKLLDEAN 631
+ NDL P T ++ + A+A+NEN +LH+S T E+L A
Sbjct: 176 VEHNDLSGSCPDLTAQQIQKWDDYLYETAKAVNENGVLHESTGERTSEDLSSSVYEVAAP 235
Query: 632 SFIEVCKELMSDTAD 676
+E + +S T++
Sbjct: 236 GIMETLTQTISGTSN 250
>AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical
protein Y39G10AR.10 protein.
Length = 690
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +2
Query: 527 KALAEALNENEILHKSLSLLTEENLKYKKLLDEANSFIEVCKELMSDTADDTGIEIDDTK 706
K LAE E+++L + LL +EN++ K ++ +E S +A +T E ++ K
Sbjct: 32 KMLAEEKEEHQLLKDEVVLLRKENVEAKTYSTLLEIMLDEAEEKAS-SAQETTSEENNLK 90
Query: 707 ICN 715
I N
Sbjct: 91 ILN 93
>Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical
protein F27D4.4a protein.
Length = 374
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 316 NYTKISRQRFIGWSKERQHQGILQSKEYCD*EEKFI*IYSSKFR*MDLRE 465
N TK++ Q FI W K++ + + KE D +EK I S K M R+
Sbjct: 236 NLTKLTLQTFIAWKKKKLRE--RKEKEEADLKEKKEKIKSGKHNGMSGRD 283
>Z83122-8|CAF31484.1| 582|Caenorhabditis elegans Hypothetical
protein R11A5.4b protein.
Length = 582
Score = 27.9 bits (59), Expect = 9.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 280 WRRKQNKFKHCNNYTKISR 336
W K+ + +HCN YT+ SR
Sbjct: 548 WMLKRRESRHCNYYTRFSR 566
>Z70270-4|CAA94225.1| 615|Caenorhabditis elegans Hypothetical
protein C53D6.6 protein.
Length = 615
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +2
Query: 434 QVNLDKWISENDLCLEVPSETYWKVVAEKRRKALAEALNENEILHKSLSLLTEENLKYKK 613
+ L++WISE ++ E P +W+ + R L L+ + +L +LL ENL K
Sbjct: 527 KTELERWISEPNIAFEEPI-VFWQKAENRTRYPLLFQLS-SIVLCLPGALLNTENLTSAK 584
Query: 614 LL 619
L
Sbjct: 585 NL 586
>AF039048-10|AAB94240.2| 421|Caenorhabditis elegans Hypothetical
protein F16B4.9 protein.
Length = 421
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +2
Query: 290 SKINSNTATTILKSVDKDLLAGRKKGSIKEYFSPRNIVTKKKNSSKSIQVNLDKWISEND 469
S + + T T + VD LLAG+ + + + P + KK N+ + ++++L +W S+
Sbjct: 132 SSMLTPTITKPKRIVDVTLLAGKIQKILNDKKIPEHPRLKKLNNLERLELSLREWRSKQK 191
Query: 470 L 472
+
Sbjct: 192 I 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,717,064
Number of Sequences: 27780
Number of extensions: 259082
Number of successful extensions: 783
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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