Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_F02
         (741 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4SLB3 Cluster: Chromosome 7 SCAF14557, whole genome sh...    37   0.45 
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    34   3.2  
UniRef50_Q4P734 Cluster: Putative uncharacterized protein; n=1; ...    33   7.4  
UniRef50_Q4UGK2 Cluster: Putative uncharacterized protein; n=2; ...    33   9.7  

>UniRef50_Q4SLB3 Cluster: Chromosome 7 SCAF14557, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 7
           SCAF14557, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 842

 Score = 37.1 bits (82), Expect = 0.45
 Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = +2

Query: 440 PVKLQKCRLNQISFHPSLCSRRISNW-RSPPRHPARMFCIKSPVISGHQVETCRR 601
           PV++ +  L+++S   S  + ++S W R PP  P    C+  P+++ HQ   CR+
Sbjct: 55  PVRILESSLSEVSGRRSQPASKVSEWLRGPPTEP----CVTEPLLADHQRPLCRK 105


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +3

Query: 21  LKWVDDLTAHLV*SGY*NP 77
           L+WVD+LTAHLV SGY +P
Sbjct: 157 LRWVDELTAHLVLSGYWSP 175


>UniRef50_Q4P734 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 766

 Score = 33.1 bits (72), Expect = 7.4
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +2

Query: 431 NSSPVKLQKCRLNQISFHPSLCSRRISNWRSPPRHPARMFCIKSP 565
           NSSPVKL+ C   Q S   +  +R  S  R PPR  +  F  + P
Sbjct: 408 NSSPVKLRPCFRRQSSHQSAASTRESSCERDPPRGRSVRFSSRPP 452


>UniRef50_Q4UGK2 Cluster: Putative uncharacterized protein; n=2;
            Theileria|Rep: Putative uncharacterized protein -
            Theileria annulata
          Length = 2667

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 436  LSCKVAKMSPK--SNFLSPIAMFTTYLKLEVPPPSSSSNVLHQE 561
            LS K +  S +  S FL  I+ + TY    +PPP SSS  L Q+
Sbjct: 2622 LSIKYSSFSQQVDSQFLKSISSYKTYRSFNIPPPPSSSASLVQD 2665


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,545,855
Number of Sequences: 1657284
Number of extensions: 15018162
Number of successful extensions: 31439
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31428
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)