Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_F02
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    26   0.28 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    25   0.85 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.6  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 160 GEAAVVTIIETLELISQGGWRIYFVD 83
           GEA ++   E +EL  +GGW++ + D
Sbjct: 292 GEAGMLGYNEIVELQKEGGWKVVWDD 317


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 607 YSSPTCFHLMSRNNGALDAKHSSWMTGGGP 518
           Y SP    +  RN+  +DA+   WM+ G P
Sbjct: 260 YPSPLYELVDRRNDENIDAQVKYWMSNGAP 289


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +2

Query: 440 PVKLQKCRLNQISFHPSLCSRR 505
           PVK +KC ++ +S H SL ++R
Sbjct: 13  PVKKRKCTVSNVSLH-SLKNKR 33


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,132
Number of Sequences: 336
Number of extensions: 4098
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)