Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_F01
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.0  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   6.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   6.1  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   6.1  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
 Frame = +2

Query: 275  EEITEKEKKVRSSQL-DKPIHKPRDSLFSWSSEFANFTGLVNWGFLMLTVG 424
            EE  E    V SS +   P H    SL    SEF       NW +    VG
Sbjct: 1790 EEREEAPPSVHSSTVVPPPQHSTTQSLVDPKSEFKVVCYFTNWAWYRQGVG 1840



 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 218  SSFCDFVKLLTEYPKPR 168
            S+F DFVK L E  KP+
Sbjct: 1963 SAFADFVKELHEAFKPK 1979


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 332 HKPRDSLFSWSSEFANFTGLVNWGFLMLTVGGVRLCLEN 448
           ++P +  F+     AN    VN+ FL L   G  L L+N
Sbjct: 33  NRPGNGKFTPEDIDANLCTHVNYAFLGLNDDGSLLILDN 71


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 108 NPAFSDFLSSFNDLCKVM*FLLT 40
           NP F   L SFN   K++ F+++
Sbjct: 65  NPLFDGQLYSFNTFAKLLIFVVS 87


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 621 SFIKFTAIPFSIISATTVGTILNISKT 541
           +F KFTA  F  +  +T+ +ILN   T
Sbjct: 286 NFPKFTAGGFFHVKKSTIFSILNTVST 312


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,185
Number of Sequences: 336
Number of extensions: 3577
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)