BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_F01
(757 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92835-6|CAB07399.1| 496|Caenorhabditis elegans Hypothetical pr... 75 5e-14
Z75526-8|CAA99773.1| 496|Caenorhabditis elegans Hypothetical pr... 75 5e-14
AF221132-1|AAF82410.1| 498|Caenorhabditis elegans diacylglycero... 75 5e-14
Z81550-7|CAH60764.1| 581|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81550-6|CAB04481.3| 578|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z70211-6|CAH60769.1| 581|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z70211-5|CAA94160.3| 578|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF273824-1|AAG15173.1| 250|Caenorhabditis elegans nuclear recep... 30 2.0
Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical p... 29 3.6
Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical pr... 29 3.6
U23514-4|AAY86231.1| 180|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z75552-6|CAA99939.1| 332|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical pr... 28 6.2
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 28 6.2
AF273825-1|AAG15174.1| 579|Caenorhabditis elegans nuclear recep... 28 6.2
Z92973-8|CAO82049.1| 517|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z81554-6|CAO82038.1| 517|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z46935-1|CAA87049.2| 519|Caenorhabditis elegans Hypothetical pr... 28 8.2
>Z92835-6|CAB07399.1| 496|Caenorhabditis elegans Hypothetical
protein H19N07.4 protein.
Length = 496
Score = 74.9 bits (176), Expect = 5e-14
Identities = 42/162 (25%), Positives = 78/162 (48%)
Frame = +2
Query: 200 RNHKMMTETEDKTLRYRRAQSVTRAEEITEKEKKVRSSQLDKPIHKPRDSLFSWSSEFAN 379
R + +ET + +L R S + + K ++R +K +H +DSLFS SS + N
Sbjct: 7 RRRRQPSETSNGSLASSRRSSFAQNGNSSRKSSEMRGP-CEKVVHTAQDSLFSTSSGWTN 65
Query: 380 FTGLVNWGFLMLTVGGVRLCLENFLKYGFRVNPIEWIIVLTGYNEGHSHQYPSVVLLIFS 559
F G N L+L + R+ LEN +KYG + P++WI ++ +P++ L++ S
Sbjct: 66 FRGFFNLSILLLVLSNGRVALENVIKYGILITPLQWISTFVEHHYS-IWSWPNLALILCS 124
Query: 560 IVPTVVALMIEKGIAVNLINEKLGVFLQITNILFIITLPAVV 685
+ + +EK + + + ++ +T+P VV
Sbjct: 125 NIQILSVFGMEKILERGWLGNGFAAVFYTSLVIAHLTIPVVV 166
>Z75526-8|CAA99773.1| 496|Caenorhabditis elegans Hypothetical
protein H19N07.4 protein.
Length = 496
Score = 74.9 bits (176), Expect = 5e-14
Identities = 42/162 (25%), Positives = 78/162 (48%)
Frame = +2
Query: 200 RNHKMMTETEDKTLRYRRAQSVTRAEEITEKEKKVRSSQLDKPIHKPRDSLFSWSSEFAN 379
R + +ET + +L R S + + K ++R +K +H +DSLFS SS + N
Sbjct: 7 RRRRQPSETSNGSLASSRRSSFAQNGNSSRKSSEMRGP-CEKVVHTAQDSLFSTSSGWTN 65
Query: 380 FTGLVNWGFLMLTVGGVRLCLENFLKYGFRVNPIEWIIVLTGYNEGHSHQYPSVVLLIFS 559
F G N L+L + R+ LEN +KYG + P++WI ++ +P++ L++ S
Sbjct: 66 FRGFFNLSILLLVLSNGRVALENVIKYGILITPLQWISTFVEHHYS-IWSWPNLALILCS 124
Query: 560 IVPTVVALMIEKGIAVNLINEKLGVFLQITNILFIITLPAVV 685
+ + +EK + + + ++ +T+P VV
Sbjct: 125 NIQILSVFGMEKILERGWLGNGFAAVFYTSLVIAHLTIPVVV 166
>AF221132-1|AAF82410.1| 498|Caenorhabditis elegans diacylglycerol
acyltransferase protein.
Length = 498
Score = 74.9 bits (176), Expect = 5e-14
Identities = 42/162 (25%), Positives = 78/162 (48%)
Frame = +2
Query: 200 RNHKMMTETEDKTLRYRRAQSVTRAEEITEKEKKVRSSQLDKPIHKPRDSLFSWSSEFAN 379
R + +ET + +L R S + + K ++R +K +H +DSLFS SS + N
Sbjct: 9 RRRRQPSETSNGSLASSRRSSFAQNGNSSRKSSEMRGP-CEKVVHTAQDSLFSTSSGWTN 67
Query: 380 FTGLVNWGFLMLTVGGVRLCLENFLKYGFRVNPIEWIIVLTGYNEGHSHQYPSVVLLIFS 559
F G N L+L + R+ LEN +KYG + P++WI ++ +P++ L++ S
Sbjct: 68 FRGFFNLSILLLVLSNGRVALENVIKYGILITPLQWISTFVEHHYS-IWSWPNLALILCS 126
Query: 560 IVPTVVALMIEKGIAVNLINEKLGVFLQITNILFIITLPAVV 685
+ + +EK + + + ++ +T+P VV
Sbjct: 127 NIQILSVFGMEKILERGWLGNGFAAVFYTSLVIAHLTIPVVV 168
>Z81550-7|CAH60764.1| 581|Caenorhabditis elegans Hypothetical
protein K11E4.5b protein.
Length = 581
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 260 SVTRAEEITEKEKKVRSSQLDKPIHKPRDSLFSWSSEFANFTGLVNWGFLMLTVGGVRL 436
SVT E +TE +KV + D +++ LF W +E + +G ++L +G + L
Sbjct: 369 SVTNNEHVTEDTRKVMKQRRDWAMNR----LFDWYNEHGTSDPPLRFGQMILLLGEIEL 423
>Z81550-6|CAB04481.3| 578|Caenorhabditis elegans Hypothetical
protein K11E4.5a protein.
Length = 578
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 260 SVTRAEEITEKEKKVRSSQLDKPIHKPRDSLFSWSSEFANFTGLVNWGFLMLTVGGVRL 436
SVT E +TE +KV + D +++ LF W +E + +G ++L +G + L
Sbjct: 366 SVTNNEHVTEDTRKVMKQRRDWAMNR----LFDWYNEHGTSDPPLRFGQMILLLGEIEL 420
>Z70211-6|CAH60769.1| 581|Caenorhabditis elegans Hypothetical
protein K11E4.5b protein.
Length = 581
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 260 SVTRAEEITEKEKKVRSSQLDKPIHKPRDSLFSWSSEFANFTGLVNWGFLMLTVGGVRL 436
SVT E +TE +KV + D +++ LF W +E + +G ++L +G + L
Sbjct: 369 SVTNNEHVTEDTRKVMKQRRDWAMNR----LFDWYNEHGTSDPPLRFGQMILLLGEIEL 423
>Z70211-5|CAA94160.3| 578|Caenorhabditis elegans Hypothetical
protein K11E4.5a protein.
Length = 578
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 260 SVTRAEEITEKEKKVRSSQLDKPIHKPRDSLFSWSSEFANFTGLVNWGFLMLTVGGVRL 436
SVT E +TE +KV + D +++ LF W +E + +G ++L +G + L
Sbjct: 366 SVTNNEHVTEDTRKVMKQRRDWAMNR----LFDWYNEHGTSDPPLRFGQMILLLGEIEL 420
>AF273824-1|AAG15173.1| 250|Caenorhabditis elegans nuclear receptor
NHR-71 protein.
Length = 250
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 260 SVTRAEEITEKEKKVRSSQLDKPIHKPRDSLFSWSSEFANFTGLVNWGFLMLTVGGVRL 436
SVT E +TE +KV + D +++ LF W +E + +G ++L +G + L
Sbjct: 38 SVTNNEHVTEDTRKVMKQRRDWAMNR----LFDWYNEHGTSDPPLRFGQMILLLGEIEL 92
>Z68222-10|CAA92505.3| 1701|Caenorhabditis elegans Hypothetical
protein ZK1251.9 protein.
Length = 1701
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Frame = +2
Query: 284 TEKEKKVRSSQLDKPIHKPRDSLFS-WSSEFANFTGLVNWGFL-----MLTVGGVRLCLE 445
T + + LD+ + +P + ++S W++E F+ NW + T + E
Sbjct: 1042 TNVVRNISLRTLDQELLRPHERVYSQWTNERTIFSRFRNWKTIHDHDESYTKATFSVDDE 1101
Query: 446 NFLKYGFRVNPIEWIIVLTGYNEGHSHQYPSVV 544
+ + G + WI V TG +EGH++ + S +
Sbjct: 1102 HLI-VGLFNGEVHWINVDTGLDEGHTNCHGSAL 1133
>Z68218-5|CAA92475.3| 1701|Caenorhabditis elegans Hypothetical protein
ZK1251.9 protein.
Length = 1701
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Frame = +2
Query: 284 TEKEKKVRSSQLDKPIHKPRDSLFS-WSSEFANFTGLVNWGFL-----MLTVGGVRLCLE 445
T + + LD+ + +P + ++S W++E F+ NW + T + E
Sbjct: 1042 TNVVRNISLRTLDQELLRPHERVYSQWTNERTIFSRFRNWKTIHDHDESYTKATFSVDDE 1101
Query: 446 NFLKYGFRVNPIEWIIVLTGYNEGHSHQYPSVV 544
+ + G + WI V TG +EGH++ + S +
Sbjct: 1102 HLI-VGLFNGEVHWINVDTGLDEGHTNCHGSAL 1133
>U23514-4|AAY86231.1| 180|Caenorhabditis elegans Hypothetical
protein F48E8.8 protein.
Length = 180
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 221 ETEDKTLRYRRAQSVTRAEEITEKEKKVRSSQLD 322
E DK R RRA+ + R +E KE+ +R +Q D
Sbjct: 23 EEIDKESRRRRAEQIKRLKERLRKERALREAQGD 56
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 209 KMMTETEDKTLRYRRAQSVTRAEEITEKEKKVRSSQLDKPIHKPRD 346
K TE E K A+ + EE EKEKK + L+K P+D
Sbjct: 740 KAKTEAEAKK-EAEEAEKRKKKEEQLEKEKKEKREALEKHYQLPKD 784
>Z75552-6|CAA99939.1| 332|Caenorhabditis elegans Hypothetical
protein W04D2.2a protein.
Length = 332
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -3
Query: 368 LNSMKIKNLGACESVYPIVNFVLSSPFQLFLLHE*HFGLSYNEVSYLQFLSSF 210
L K LGAC+S Y I+ +L P + + +F +S ++ YL + F
Sbjct: 24 LKGTKWPVLGACQSAYGIMIDILYLPILSIIFEKDNFKMSCFKIMYLLGIIDF 76
>Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical
protein T13H5.2 protein.
Length = 408
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 266 TRAEEITEKEKKVRSSQLDKPIHKPRDSLFSWSSEFANFTGLVNW 400
T EITE ++K+ +L K IHK + + + +F+ L+ W
Sbjct: 15 TSTGEITESDRKLLD-ELRKRIHKELELVKEYDDDFSLMRWLIGW 58
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 209 KMMTETEDKTLRYRRAQSVTRAEEITEKEKKVRSSQLDKPIHKPRD 346
K TE E K A+ + EE EKEKK + L+K P+D
Sbjct: 740 KAKTEAEAKK-EAEEAEKRKKKEEQLEKEKKEKREALEKHYQLPKD 784
>AF273825-1|AAG15174.1| 579|Caenorhabditis elegans nuclear receptor
NHR-71 protein.
Length = 579
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 260 SVTRAEEITEKEKKVRSSQLDKPIHKPRDSLFSWSSEFANFTGLVNWGFLMLTVGGV 430
SVT E +TE +KV + D +++ LF W +E + +G ++L +G +
Sbjct: 367 SVTNNEHVTEDTRKVMKQRRDWAMNR----LFDWYNEHGTSDPPLRFGQMILLLGEI 419
>Z92973-8|CAO82049.1| 517|Caenorhabditis elegans Hypothetical
protein Y6G8.8 protein.
Length = 517
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 715 EAKMISFDLQNNSGQRDNKQYISYL*EHAKFFIY*IHSNSFFN 587
EA F ++N +NK Y++ EH K F+ +H S F+
Sbjct: 58 EASGCRFKMENAEEYIENKNYVTLSIEHLKRFLSSVHLLSSFS 100
>Z81554-6|CAO82038.1| 517|Caenorhabditis elegans Hypothetical
protein Y6G8.8 protein.
Length = 517
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 715 EAKMISFDLQNNSGQRDNKQYISYL*EHAKFFIY*IHSNSFFN 587
EA F ++N +NK Y++ EH K F+ +H S F+
Sbjct: 58 EASGCRFKMENAEEYIENKNYVTLSIEHLKRFLSSVHLLSSFS 100
>Z46935-1|CAA87049.2| 519|Caenorhabditis elegans Hypothetical
protein M106.2 protein.
Length = 519
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -2
Query: 600 IPFSIISATTVGTILNISKTTDGYW*E*PSL*PVNTMIHSIGFTRKPYFKKFSRQSRTPP 421
+P + +S TT IL+ K T PSL + + T+ P KK + +S T P
Sbjct: 140 VPITPVSTTTADNILDYIKATHVS----PSLSVDAALQQARALTKSPISKKITSRSATAP 195
Query: 420 TV 415
+V
Sbjct: 196 SV 197
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,243,594
Number of Sequences: 27780
Number of extensions: 336129
Number of successful extensions: 992
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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