BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_E20
(834 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal... 26 1.6
AY193728-1|AAO62001.1| 519|Anopheles gambiae cytochrome P450 CY... 23 8.7
>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
growth factor receptorprotein.
Length = 1433
Score = 25.8 bits (54), Expect = 1.6
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 171 SAEGKTPEYMALAGIKFKLSLPEFKDNIQLKEQLLNGIKAGHMAPY 308
S TP YM L G+ + PE+ + Q + G+ G M P+
Sbjct: 1227 SQNQSTPGYMDLIGVPASVDNPEY---LMGSTQAIAGLAQGSMGPH 1269
>AY193728-1|AAO62001.1| 519|Anopheles gambiae cytochrome P450
CYPm3r5 protein.
Length = 519
Score = 23.4 bits (48), Expect = 8.7
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 582 NVKEMGKAINKAH 620
N KEMGK+I+ AH
Sbjct: 49 NFKEMGKSIHPAH 61
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,075
Number of Sequences: 2352
Number of extensions: 15814
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88065063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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