BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_E19
(724 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ974167-1|ABJ52807.1| 434|Anopheles gambiae serpin 8 protein. 24 5.5
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ... 23 7.2
AY843205-1|AAX14774.1| 478|Anopheles gambiae odorant receptor O... 23 7.2
AY363725-1|AAR14938.1| 478|Anopheles gambiae seven transmembran... 23 7.2
AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein prot... 23 7.2
>DQ974167-1|ABJ52807.1| 434|Anopheles gambiae serpin 8 protein.
Length = 434
Score = 23.8 bits (49), Expect = 5.5
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 322 DCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKA 465
D +NFDK D+N + ++ Q + E T A V A+KA
Sbjct: 352 DSGVANFDKISDLNAIYISSVIQQTKIVVNEEGTMTAAVTTGVFANKA 399
>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
protein.
Length = 1087
Score = 23.4 bits (48), Expect = 7.2
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 602 LKLVGQIL*KPMKCFLKYHLEDLVRY 679
L LVG + + +KC +Y +E++V Y
Sbjct: 601 LPLVGVAVSRVLKCIPEYIIENIVGY 626
>AY843205-1|AAX14774.1| 478|Anopheles gambiae odorant receptor
Or83b protein.
Length = 478
Score = 23.4 bits (48), Expect = 7.2
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 534 FRTRTIWNQSKCYQSYCDND 593
+RT IWNQ+ + + ++D
Sbjct: 100 YRTLAIWNQTNTHPLFAESD 119
>AY363725-1|AAR14938.1| 478|Anopheles gambiae seven transmembrane G
protein-coupledreceptor protein.
Length = 478
Score = 23.4 bits (48), Expect = 7.2
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 534 FRTRTIWNQSKCYQSYCDND 593
+RT IWNQ+ + + ++D
Sbjct: 100 YRTLAIWNQTNTHPLFAESD 119
>AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein
protein.
Length = 385
Score = 23.4 bits (48), Expect = 7.2
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +1
Query: 352 FDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKAAL 471
FD+ ++N+SQ RK + GA+ + SK L
Sbjct: 268 FDLLFDRIVNVSQANMRKFNSWQMMGALCRVHRPMSKVLL 307
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,501
Number of Sequences: 2352
Number of extensions: 12891
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -