Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_E18
(788 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF013758-1|AAC39697.2| 479|Homo sapiens polyadenylate binding p... 40 1e-05
BC005295-1|AAH05295.1| 400|Homo sapiens poly(A) binding protein... 40 1e-05
BC015937-1|AAH15937.1| 479|Homo sapiens poly(A) binding protein... 37 9e-05
M83566-1|AAA35629.1| 2181|Homo sapiens calcium channel alpha-1 s... 31 4.7
M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D ... 31 4.7
D43747-1|BAA07804.1| 2170|Homo sapiens voltage-dependent calcium... 31 4.7
AB209171-1|BAD92408.1| 1854|Homo sapiens calcium channel, voltag... 31 4.7
X95808-1|CAA65075.1| 1358|Homo sapiens DXS6673E protein. 31 6.3
BT007095-1|AAP35759.1| 495|Homo sapiens zinc finger protein 261... 31 6.3
BC069057-1|AAH69057.1| 1370|Homo sapiens zinc finger, MYM-type 3... 31 6.3
BC013009-1|AAH13009.1| 495|Homo sapiens ZMYM3 protein protein. 31 6.3
AL133380-4|CAI23046.1| 1036|Homo sapiens mixed lineage kinase 4 ... 31 6.3
AL133380-3|CAI23045.1| 570|Homo sapiens mixed lineage kinase 4 ... 31 6.3
AJ311798-1|CAC84640.1| 1036|Homo sapiens mixed lineage kinase 4b... 31 6.3
AJ311797-1|CAC84639.1| 570|Homo sapiens mixed lineage kinase 4a... 31 6.3
AB002383-1|BAA20839.2| 1380|Homo sapiens KIAA0385 protein. 31 6.3
BC064404-1|AAH64404.1| 719|Homo sapiens nucleolar protein 11 pr... 30 8.3
BC001726-1|AAH01726.2| 408|Homo sapiens NOL11 protein protein. 30 8.3
AY598333-1|AAT06744.1| 719|Homo sapiens L14 protein. 30 8.3
AK023702-1|BAB14647.1| 719|Homo sapiens protein ( Homo sapiens ... 30 8.3
>AF013758-1|AAC39697.2| 479|Homo sapiens polyadenylate binding
protein-interacting protein-1 protein.
Length = 479
Score = 40.3 bits (90), Expect(2) = 1e-05
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 568 ITFDPGKFDTLCGPLVDSFASTLNDESYTRPLVDAIVNQSIGEANFRYNGARLCS--MYD 741
+T PG F+T ++ + + + LV+ I Q+ NF Y GARLC+ +
Sbjct: 169 LTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHH 228
Query: 742 SXAQPEESVFRECLL 786
P+ FR+ LL
Sbjct: 229 LTISPQSGNFRQLLL 243
Score = 29.1 bits (62), Expect(2) = 1e-05
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 328 SKLSADAKEWYPANYTSQALPAYNTEPAPYRPSRPSVQGRLRQAQDQ 468
SKLS +A E+YP+ Y+S +Y Y VQ L +Q
Sbjct: 126 SKLSVNAPEFYPSGYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQ 172
>BC005295-1|AAH05295.1| 400|Homo sapiens poly(A) binding protein
interacting protein 1 protein.
Length = 400
Score = 40.3 bits (90), Expect(2) = 1e-05
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = +1
Query: 568 ITFDPGKFDTLCGPLVDSFASTLNDESYTRPLVDAIVNQSIGEANFRYNGARLCS--MYD 741
+T PG F+T ++ + + + LV+ I Q+ NF Y GARLC+ +
Sbjct: 90 LTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHH 149
Query: 742 SXAQPEESVFRECLL 786
P+ FR+ LL
Sbjct: 150 LTISPQSGNFRQLLL 164
Score = 29.1 bits (62), Expect(2) = 1e-05
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 328 SKLSADAKEWYPANYTSQALPAYNTEPAPYRPSRPSVQGRLRQAQDQ 468
SKLS +A E+YP+ Y+S +Y Y VQ L +Q
Sbjct: 47 SKLSVNAPEFYPSGYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQ 93
>BC015937-1|AAH15937.1| 479|Homo sapiens poly(A) binding protein
interacting protein 1 protein.
Length = 479
Score = 37.1 bits (82), Expect(2) = 9e-05
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +1
Query: 568 ITFDPGKFDTLCGPLVDSFASTLNDESYTRPLVDAIVNQSIGEANFRYNGARLCS--MYD 741
+T PG F+T ++ + + + LV+ I Q+ NF Y GARLC+ +
Sbjct: 169 LTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHH 228
Query: 742 SXAQPEESVFRECLL 786
P+ F + LL
Sbjct: 229 LTISPQSGNFCQLLL 243
Score = 29.1 bits (62), Expect(2) = 9e-05
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +1
Query: 328 SKLSADAKEWYPANYTSQALPAYNTEPAPYRPSRPSVQGRLRQAQDQ 468
SKLS +A E+YP+ Y+S +Y Y VQ L +Q
Sbjct: 126 SKLSVNAPEFYPSGYSSSYTESYEDGCEDYPTLSEYVQDFLNHLTEQ 172
>M83566-1|AAA35629.1| 2181|Homo sapiens calcium channel alpha-1
subunit protein.
Length = 2181
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 133 IYQSRLWNCIKAAL*NC--CRGLIVKMNNGDISAPKGRGRGWQ 255
+++ + + C A N CRGL + +GD+ +P R R WQ
Sbjct: 1056 LFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQ 1098
>M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D
subunit protein.
Length = 2161
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 133 IYQSRLWNCIKAAL*NC--CRGLIVKMNNGDISAPKGRGRGWQ 255
+++ + + C A N CRGL + +GD+ +P R R WQ
Sbjct: 1036 LFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQ 1078
>D43747-1|BAA07804.1| 2170|Homo sapiens voltage-dependent calcium
channel alpha1 subunit, CACN4 protein.
Length = 2170
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 133 IYQSRLWNCIKAAL*NC--CRGLIVKMNNGDISAPKGRGRGWQ 255
+++ + + C A N CRGL + +GD+ +P R R WQ
Sbjct: 1047 LFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQ 1089
>AB209171-1|BAD92408.1| 1854|Homo sapiens calcium channel,
voltage-dependent, L type, alpha 1D subunit variant
protein.
Length = 1854
Score = 31.1 bits (67), Expect = 4.7
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 133 IYQSRLWNCIKAAL*NC--CRGLIVKMNNGDISAPKGRGRGWQ 255
+++ + + C A N CRGL + +GD+ +P R R WQ
Sbjct: 729 LFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQ 771
>X95808-1|CAA65075.1| 1358|Homo sapiens DXS6673E protein.
Length = 1358
Score = 30.7 bits (66), Expect = 6.3
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -2
Query: 631 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 470
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 397 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 452
>BT007095-1|AAP35759.1| 495|Homo sapiens zinc finger protein 261
protein.
Length = 495
Score = 30.7 bits (66), Expect = 6.3
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -2
Query: 631 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 470
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 397 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 452
>BC069057-1|AAH69057.1| 1370|Homo sapiens zinc finger, MYM-type 3
protein.
Length = 1370
Score = 30.7 bits (66), Expect = 6.3
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -2
Query: 631 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 470
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 397 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 452
>BC013009-1|AAH13009.1| 495|Homo sapiens ZMYM3 protein protein.
Length = 495
Score = 30.7 bits (66), Expect = 6.3
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -2
Query: 631 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 470
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 397 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 452
>AL133380-4|CAI23046.1| 1036|Homo sapiens mixed lineage kinase 4
(KIAA1804) protein.
Length = 1036
Score = 30.7 bits (66), Expect = 6.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 358 YPANYTSQALPAYNTEPAPYRPSRP 432
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
>AL133380-3|CAI23045.1| 570|Homo sapiens mixed lineage kinase 4
(KIAA1804) protein.
Length = 570
Score = 30.7 bits (66), Expect = 6.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 358 YPANYTSQALPAYNTEPAPYRPSRP 432
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
>AJ311798-1|CAC84640.1| 1036|Homo sapiens mixed lineage kinase 4beta
protein.
Length = 1036
Score = 30.7 bits (66), Expect = 6.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 358 YPANYTSQALPAYNTEPAPYRPSRP 432
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
>AJ311797-1|CAC84639.1| 570|Homo sapiens mixed lineage kinase
4alpha protein.
Length = 570
Score = 30.7 bits (66), Expect = 6.3
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 358 YPANYTSQALPAYNTEPAPYRPSRP 432
+PANY + PA + P P RPS P
Sbjct: 92 FPANYVAPCRPAASPAPPPSRPSSP 116
>AB002383-1|BAA20839.2| 1380|Homo sapiens KIAA0385 protein.
Length = 1380
Score = 30.7 bits (66), Expect = 6.3
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -2
Query: 631 LKQMNPPRDHTRCQTCP--GQRLSHT*QLSSL--LCSPVDPCFQLLQVNKTCHPNCMD 470
+ Q P D TRC C G+ L S + LCS D CF + NK NC D
Sbjct: 407 IPQSGDPADATRCSICQKTGEVLHEVSNGSVVHRLCS--DSCFSKFRANKGLKTNCCD 462
>BC064404-1|AAH64404.1| 719|Homo sapiens nucleolar protein 11
protein.
Length = 719
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 229 PKGRGRGWQMNNQAREL--RRPKAVSDEPKVDTSKSKLSADAKE 354
P+G G G+Q + Q+R + RR VS +P+V SK LS K+
Sbjct: 365 PQGCGLGFQNSEQSRRILRRRKIEVSLQPEVPPSKQLLSTIMKD 408
>BC001726-1|AAH01726.2| 408|Homo sapiens NOL11 protein protein.
Length = 408
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 229 PKGRGRGWQMNNQAREL--RRPKAVSDEPKVDTSKSKLSADAKE 354
P+G G G+Q + Q+R + RR VS +P+V SK LS K+
Sbjct: 54 PQGCGLGFQNSEQSRRILRRRKIEVSLQPEVPPSKQLLSTIMKD 97
>AY598333-1|AAT06744.1| 719|Homo sapiens L14 protein.
Length = 719
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 229 PKGRGRGWQMNNQAREL--RRPKAVSDEPKVDTSKSKLSADAKE 354
P+G G G+Q + Q+R + RR VS +P+V SK LS K+
Sbjct: 365 PQGCGLGFQNSEQSRRILRRRKIEVSLQPEVPPSKQLLSTIMKD 408
>AK023702-1|BAB14647.1| 719|Homo sapiens protein ( Homo sapiens
cDNA FLJ13640 fis, clone PLACE1011221. ).
Length = 719
Score = 30.3 bits (65), Expect = 8.3
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 229 PKGRGRGWQMNNQAREL--RRPKAVSDEPKVDTSKSKLSADAKE 354
P+G G G+Q + Q+R + RR VS +P+V SK LS K+
Sbjct: 365 PQGCGLGFQNSEQSRRILRRRKIEVSLQPEVPPSKQLLSTIMKD 408
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,278,749
Number of Sequences: 237096
Number of extensions: 2780641
Number of successful extensions: 6166
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6143
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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