Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_E16
         (787 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   3.7  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    23   3.7  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   3.7  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   3.7  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    22   6.4  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   6.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.4  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 348 KSQYNSHQVSYQ*IFLFSC 292
           KS  NSH  S+  ++ +SC
Sbjct: 271 KSMLNSHMKSHSNVYRYSC 289


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 348 KSQYNSHQVSYQ*IFLFSC 292
           KS  NSH  S+  ++ +SC
Sbjct: 29  KSMLNSHMKSHSNVYRYSC 47


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = -3

Query: 467 HQYKTLKN*QKYMTDYISIIGEIDSALTINNKYINNL 357
           H Y+ +KN Q Y   +I      +    IN  Y N L
Sbjct: 300 HPYQMIKNQQVYDVPWIVSFTNSEGLYAINEIYDNAL 336


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = -3

Query: 467 HQYKTLKN*QKYMTDYISIIGEIDSALTINNKYINNL 357
           H Y+ +KN Q Y   +I      +    IN  Y N L
Sbjct: 300 HPYQMIKNQQVYDVPWIVSFTNSEGLYAINEIYDNAL 336


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -3

Query: 467 HQYKTLKN*QKYMTDYISIIGEIDSALTINNKYINNL 357
           H Y+ +KN Q Y   +I+   + +    ++  Y N L
Sbjct: 300 HPYQIIKNQQVYDVPWIASFTKSEGLYHLDEVYNNQL 336


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -3

Query: 467 HQYKTLKN*QKYMTDYISIIGEIDSALTINNKYINNL 357
           H Y+ +KN Q Y   +I+   + +    ++  Y N L
Sbjct: 300 HPYQIIKNKQVYDVPWIASFTKSEGLYHLDEVYNNQL 336


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/33 (30%), Positives = 11/33 (33%)
 Frame = -1

Query: 196 YFSASSLRHFCPP*DFIVLVTCLCKTDLLILNC 98
           YF  S    F  P  F     C C    L + C
Sbjct: 756 YFPGSRFHPFLIPTGFDSCTVCTCDAKYLEIKC 788


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,756
Number of Sequences: 336
Number of extensions: 3601
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)