Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_E13
         (798 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0021 - 214401-214613,214707-214790,214887-215041,215165-21...   266   2e-71

>06_01_0021 -
           214401-214613,214707-214790,214887-215041,215165-215234,
           215334-215509,215631-215803,216715-216938
          Length = 364

 Score =  266 bits (651), Expect = 2e-71
 Identities = 121/189 (64%), Positives = 143/189 (75%), Gaps = 1/189 (0%)
 Frame = +2

Query: 233 KLKITTEFGLMEVAPNEIAVIQLGMRFAVFV-EGPTRGYILEVFDGHFKLPDLGPIGANG 409
           +L ITTE G + V P EI VI  G RFAV + +GP+RGY+ E+F  HF+LPDLGPIGANG
Sbjct: 77  ELLITTECGKLLVPPGEIVVIPQGFRFAVDLPDGPSRGYVSEIFGTHFQLPDLGPIGANG 136

Query: 410 LANPRDFLTPVAHYVDEETPGFQIFNKYQGFLFVAEQNHNPFDVVAWHGNYVPYKYDLNN 589
           LA+ RDFL+P A +     PG+ I  KY G LF A Q+ +PF+VVAWHGNYVPYKYDL+ 
Sbjct: 137 LASARDFLSPTAWFEQVHRPGYTIVQKYGGELFTATQDFSPFNVVAWHGNYVPYKYDLSK 196

Query: 590 FMVINAVLYDHCDPSIFTVLTCPSAKPGIAIADFVIFPPXWSVQEHTFRPPYYHRNCMSE 769
           F   N VL+DH DPS+ TVLT P+ KPG+A+ DFVIFPP W V E+TFRPPYYHRNCMSE
Sbjct: 197 FCPFNTVLFDHADPSVNTVLTAPTDKPGVALLDFVIFPPRWLVAENTFRPPYYHRNCMSE 256

Query: 770 FMGLILGSY 796
           FMGLI G Y
Sbjct: 257 FMGLIYGIY 265


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,587,529
Number of Sequences: 37544
Number of extensions: 567928
Number of successful extensions: 1273
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1272
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)