Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_E13
(798 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93778-8|CAB07848.4| 437|Caenorhabditis elegans Hypothetical pr... 380 e-106
AL034364-5|CAA22255.4| 437|Caenorhabditis elegans Hypothetical ... 380 e-106
AF136150-1|AAF61419.1| 437|Caenorhabditis elegans homogentisate... 380 e-106
U95181-1|AAD00776.1| 437|Caenorhabditis elegans 2,5 dihydroxyph... 373 e-104
Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical pr... 29 2.9
U80840-1|AAK68304.1| 498|Caenorhabditis elegans Hypothetical pr... 29 3.9
U41272-5|AAA82449.1| 296|Caenorhabditis elegans Hypothetical pr... 29 5.1
U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical pr... 29 5.1
AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical ... 29 5.1
>Z93778-8|CAB07848.4| 437|Caenorhabditis elegans Hypothetical
protein W06D4.1 protein.
Length = 437
Score = 380 bits (934), Expect = e-106
Identities = 174/252 (69%), Positives = 197/252 (78%)
Frame = +2
Query: 41 RWLPFDIPSDESVDFVTGLHTVCGAGDPRSRHGIAIHVYLCNASMDKSAFYSSDGDFLIV 220
RW PF +P+ E V FV L+TVCG GD SR G+AIH + CNASM+ +A Y+SDGDFLIV
Sbjct: 101 RWNPFPLPTKEGVTFVDNLYTVCGGGDVISRTGLAIHQFSCNASMEHTAMYNSDGDFLIV 160
Query: 221 PQQGKLKITTEFGLMEVAPNEIAVIQLGMRFAVFVEGPTRGYILEVFDGHFKLPDLGPIG 400
PQQG L+ITTEFG + V P EIAVI G+RF+V V GP+RGYILEV+ HF+LPDLGPIG
Sbjct: 161 PQQGALEITTEFGRLLVNPQEIAVIPQGIRFSVAVRGPSRGYILEVYGTHFQLPDLGPIG 220
Query: 401 ANGLANPRDFLTPVAHYVDEETPGFQIFNKYQGFLFVAEQNHNPFDVVAWHGNYVPYKYD 580
ANGLANPRDF PVA + D + F I NKYQG F A+Q H+PFDVV WHGNYVPYKYD
Sbjct: 221 ANGLANPRDFEAPVAWFEDLDVE-FTIINKYQGSWFQAKQGHSPFDVVGWHGNYVPYKYD 279
Query: 581 LNNFMVINAVLYDHCDPSIFTVLTCPSAKPGIAIADFVIFPPXWSVQEHTFRPPYYHRNC 760
L FMVIN V +DHCDPSIFTVLT PS K G AIADFVIFPP W ++TFRPPYYHRNC
Sbjct: 280 LKKFMVINTVSFDHCDPSIFTVLTAPSVKHGTAIADFVIFPPRWGCADNTFRPPYYHRNC 339
Query: 761 MSEFMGLILGSY 796
MSE+MGLI G Y
Sbjct: 340 MSEYMGLITGCY 351
>AL034364-5|CAA22255.4| 437|Caenorhabditis elegans Hypothetical
protein W06D4.1 protein.
Length = 437
Score = 380 bits (934), Expect = e-106
Identities = 174/252 (69%), Positives = 197/252 (78%)
Frame = +2
Query: 41 RWLPFDIPSDESVDFVTGLHTVCGAGDPRSRHGIAIHVYLCNASMDKSAFYSSDGDFLIV 220
RW PF +P+ E V FV L+TVCG GD SR G+AIH + CNASM+ +A Y+SDGDFLIV
Sbjct: 101 RWNPFPLPTKEGVTFVDNLYTVCGGGDVISRTGLAIHQFSCNASMEHTAMYNSDGDFLIV 160
Query: 221 PQQGKLKITTEFGLMEVAPNEIAVIQLGMRFAVFVEGPTRGYILEVFDGHFKLPDLGPIG 400
PQQG L+ITTEFG + V P EIAVI G+RF+V V GP+RGYILEV+ HF+LPDLGPIG
Sbjct: 161 PQQGALEITTEFGRLLVNPQEIAVIPQGIRFSVAVRGPSRGYILEVYGTHFQLPDLGPIG 220
Query: 401 ANGLANPRDFLTPVAHYVDEETPGFQIFNKYQGFLFVAEQNHNPFDVVAWHGNYVPYKYD 580
ANGLANPRDF PVA + D + F I NKYQG F A+Q H+PFDVV WHGNYVPYKYD
Sbjct: 221 ANGLANPRDFEAPVAWFEDLDVE-FTIINKYQGSWFQAKQGHSPFDVVGWHGNYVPYKYD 279
Query: 581 LNNFMVINAVLYDHCDPSIFTVLTCPSAKPGIAIADFVIFPPXWSVQEHTFRPPYYHRNC 760
L FMVIN V +DHCDPSIFTVLT PS K G AIADFVIFPP W ++TFRPPYYHRNC
Sbjct: 280 LKKFMVINTVSFDHCDPSIFTVLTAPSVKHGTAIADFVIFPPRWGCADNTFRPPYYHRNC 339
Query: 761 MSEFMGLILGSY 796
MSE+MGLI G Y
Sbjct: 340 MSEYMGLITGCY 351
>AF136150-1|AAF61419.1| 437|Caenorhabditis elegans homogentisate
1,2-dioxygenase protein.
Length = 437
Score = 380 bits (934), Expect = e-106
Identities = 174/252 (69%), Positives = 197/252 (78%)
Frame = +2
Query: 41 RWLPFDIPSDESVDFVTGLHTVCGAGDPRSRHGIAIHVYLCNASMDKSAFYSSDGDFLIV 220
RW PF +P+ E V FV L+TVCG GD SR G+AIH + CNASM+ +A Y+SDGDFLIV
Sbjct: 101 RWNPFPLPTKEGVTFVDNLYTVCGGGDVISRTGLAIHQFSCNASMEHTAMYNSDGDFLIV 160
Query: 221 PQQGKLKITTEFGLMEVAPNEIAVIQLGMRFAVFVEGPTRGYILEVFDGHFKLPDLGPIG 400
PQQG L+ITTEFG + V P EIAVI G+RF+V V GP+RGYILEV+ HF+LPDLGPIG
Sbjct: 161 PQQGALEITTEFGRLLVNPQEIAVIPQGIRFSVAVRGPSRGYILEVYGTHFQLPDLGPIG 220
Query: 401 ANGLANPRDFLTPVAHYVDEETPGFQIFNKYQGFLFVAEQNHNPFDVVAWHGNYVPYKYD 580
ANGLANPRDF PVA + D + F I NKYQG F A+Q H+PFDVV WHGNYVPYKYD
Sbjct: 221 ANGLANPRDFEAPVAWFEDLDVE-FTIINKYQGSWFQAKQGHSPFDVVGWHGNYVPYKYD 279
Query: 581 LNNFMVINAVLYDHCDPSIFTVLTCPSAKPGIAIADFVIFPPXWSVQEHTFRPPYYHRNC 760
L FMVIN V +DHCDPSIFTVLT PS K G AIADFVIFPP W ++TFRPPYYHRNC
Sbjct: 280 LKKFMVINTVSFDHCDPSIFTVLTAPSVKHGTAIADFVIFPPRWGCADNTFRPPYYHRNC 339
Query: 761 MSEFMGLILGSY 796
MSE+MGLI G Y
Sbjct: 340 MSEYMGLITGCY 351
>U95181-1|AAD00776.1| 437|Caenorhabditis elegans 2,5
dihydroxyphenylacetate oxidase protein.
Length = 437
Score = 373 bits (918), Expect = e-104
Identities = 171/252 (67%), Positives = 196/252 (77%)
Frame = +2
Query: 41 RWLPFDIPSDESVDFVTGLHTVCGAGDPRSRHGIAIHVYLCNASMDKSAFYSSDGDFLIV 220
RW PF +P+ E V FV L+TVCG GD SR G+AIH + CNASM+ +A Y+SDG+FLIV
Sbjct: 101 RWNPFPLPTKEGVTFVDNLYTVCGGGDVISRTGLAIHQFSCNASMEHTAMYNSDGNFLIV 160
Query: 221 PQQGKLKITTEFGLMEVAPNEIAVIQLGMRFAVFVEGPTRGYILEVFDGHFKLPDLGPIG 400
PQQG L+ITTEFG + V P EIAVI G+RF+ V GP+RGYILEV+ HF+LPDLGPIG
Sbjct: 161 PQQGALEITTEFGRLPVNPQEIAVIPQGIRFSGAVRGPSRGYILEVYGTHFQLPDLGPIG 220
Query: 401 ANGLANPRDFLTPVAHYVDEETPGFQIFNKYQGFLFVAEQNHNPFDVVAWHGNYVPYKYD 580
ANGLANPRDF PVA + D + F I NKYQG F A+Q H+PF+VV WHGNYVPYKYD
Sbjct: 221 ANGLANPRDFEAPVAWFEDLDGE-FTIINKYQGSWFQAKQGHSPFEVVGWHGNYVPYKYD 279
Query: 581 LNNFMVINAVLYDHCDPSIFTVLTCPSAKPGIAIADFVIFPPXWSVQEHTFRPPYYHRNC 760
L FMVIN V +DHCDPSIFTVLT PS K G AIADFVIFPP W ++TFRPPYYHRNC
Sbjct: 280 LKKFMVINTVSFDHCDPSIFTVLTAPSVKHGTAIADFVIFPPRWGCADNTFRPPYYHRNC 339
Query: 761 MSEFMGLILGSY 796
MSE+MGLI G Y
Sbjct: 340 MSEYMGLITGCY 351
>Z50872-1|CAA90754.2| 1052|Caenorhabditis elegans Hypothetical
protein C05D12.2 protein.
Length = 1052
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 585 TTLWLSTLFCTIIVTLQYLRC*RVLLQNLGSP 680
T W S +F ++V LQ + C QN G+P
Sbjct: 3 TKQWCSIIFIVVLVFLQEITCQSAKCQNFGTP 34
>U80840-1|AAK68304.1| 498|Caenorhabditis elegans Hypothetical
protein F08D12.6 protein.
Length = 498
Score = 29.1 bits (62), Expect = 3.9
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +2
Query: 134 HGIAIHVYLCNASMDKSAFYSSDGDFLIVPQQGKLKITTEFGLMEVAPNEIAVIQ-LGMR 310
H + IH++ N+ M +FY + D V G + I TEF + I+ G+R
Sbjct: 57 HPLKIHIFSSNSVMTYLSFYKYNFDLWNVQSCGSI-IATEFDTNFFGTESVREIKGFGLR 115
Query: 311 FAVFVEGPTRGYILEVFDGHFKLPDLGPIGANGLAN 418
+ +I+E+F+ H K+ ++ G G+ N
Sbjct: 116 DCI-------DHIMEIFN-HSKIFEVHINGVMGIQN 143
>U41272-5|AAA82449.1| 296|Caenorhabditis elegans Hypothetical
protein T03G11.6 protein.
Length = 296
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 155 YLCNASMDKSAFYSSDGDFLIVP 223
YLC M+ SA+Y D FL+ P
Sbjct: 244 YLCEGDMNNSAYYLPDAIFLLKP 266
>U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical
protein T22F7.1 protein.
Length = 510
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 40 SLASLRHSIRRVCGLCDRTPYGVW--CWRSSL*TWNSHPRVLVQRF 171
SL S+ + VCG C P VW WR SL + P +LV F
Sbjct: 215 SLTSIFFGVSWVCGYCFLAPLSVWFNTWR-SLQLATALPNILVAVF 259
>AL033536-3|CAA22142.1| 1564|Caenorhabditis elegans Hypothetical
protein Y53C10A.9 protein.
Length = 1564
Score = 28.7 bits (61), Expect = 5.1
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 10/94 (10%)
Frame = +2
Query: 254 FGLMEVAPNEIAVIQLGMRF---------AVFVEGPTRG-YILEVFDGHFKLPDLGPIGA 403
FG+++ +EI VI G+ F + + PTRG ++L +F +P L
Sbjct: 1060 FGVLQGHIHEIVVIFYGLLFYFAPLVYLTSALINTPTRGNFLLYMF---CCIPWLAYSIV 1116
Query: 404 NGLANPRDFLTPVAHYVDEETPGFQIFNKYQGFL 505
+ L N P+ Y DE GF+IFN GFL
Sbjct: 1117 SELHN----FPPIQKYSDEIEYGFRIFNPSIGFL 1146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,563,474
Number of Sequences: 27780
Number of extensions: 474099
Number of successful extensions: 1323
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1319
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1945792630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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