Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_E07
(837 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B4335 Cluster: PREDICTED: similar to eukaryotic... 241 2e-62
UniRef50_Q9W4X7 Cluster: CG8636-PA; n=8; Endopterygota|Rep: CG86... 234 2e-60
UniRef50_Q9VDM6 Cluster: CG10881-PA; n=2; Sophophora|Rep: CG1088... 205 1e-51
UniRef50_O75821 Cluster: Eukaryotic translation initiation facto... 175 9e-43
UniRef50_Q4P7G1 Cluster: Putative uncharacterized protein; n=1; ... 126 7e-28
UniRef50_P78795 Cluster: Probable eukaryotic translation initiat... 119 1e-25
UniRef50_Q5DF32 Cluster: SJCHGC06618 protein; n=2; Schistosoma j... 118 2e-25
UniRef50_Q6BT10 Cluster: Debaryomyces hansenii chromosome D of s... 112 9e-24
UniRef50_A7T5A6 Cluster: Predicted protein; n=1; Nematostella ve... 109 6e-23
UniRef50_Q9FI86 Cluster: Eukaryotic translation initiation facto... 109 8e-23
UniRef50_Q016G8 Cluster: Initiation factor 3g; n=2; Ostreococcus... 107 3e-22
UniRef50_A7PNS9 Cluster: Chromosome chr8 scaffold_23, whole geno... 107 5e-22
UniRef50_Q6C747 Cluster: Yarrowia lipolytica chromosome E of str... 99 1e-19
UniRef50_Q5K9M4 Cluster: Eukaryotic translation initiation facto... 96 1e-18
UniRef50_Q19706 Cluster: Probable eukaryotic translation initiat... 87 7e-16
UniRef50_Q04067 Cluster: Eukaryotic translation initiation facto... 80 6e-14
UniRef50_Q54WM4 Cluster: Putative uncharacterized protein; n=1; ... 68 3e-10
UniRef50_A7TJ86 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_Q1JTC8 Cluster: Eukaryotic translation initiation facto... 57 6e-07
UniRef50_A7AQH9 Cluster: Translation initiation factor 3 subunit... 50 7e-05
UniRef50_Q4N900 Cluster: Eukaryotic translation initiation facto... 47 5e-04
UniRef50_Q5CWM4 Cluster: U2 snRNP. Hsh49p, RRM domain containing... 39 0.14
UniRef50_Q48A10 Cluster: RNA-binding protein; n=2; Alteromonadal... 38 0.31
UniRef50_Q4QI26 Cluster: RNA-binding protein 5-like protein; n=3... 38 0.41
UniRef50_Q9SEU4 Cluster: Serine/arginine-rich protein; n=22; Euk... 37 0.55
UniRef50_Q7RS26 Cluster: Eukaryotic translation initiation facto... 37 0.55
UniRef50_Q16YD3 Cluster: RNA-binding protein, putative; n=2; Cul... 36 0.95
UniRef50_UPI0000E486B1 Cluster: PREDICTED: hypothetical protein;... 36 1.3
UniRef50_UPI0000660E03 Cluster: Homolog of Homo sapiens "MEGF10 ... 36 1.3
UniRef50_Q08NH3 Cluster: Iron-regulated protein A; n=1; Stigmate... 36 1.3
UniRef50_O42847 Cluster: RNA-binding protein; n=1; Schizosacchar... 36 1.3
UniRef50_Q5GAI2 Cluster: Deoxyribonucleoside kinase/thymidine ki... 35 2.2
UniRef50_Q21275 Cluster: Putative uncharacterized protein; n=2; ... 35 2.2
UniRef50_A5DCN2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_A7AMH0 Cluster: RNA recognition motif domain containing... 35 2.9
UniRef50_UPI00015B51E2 Cluster: PREDICTED: similar to GA17772-PA... 34 3.8
UniRef50_A1DEZ9 Cluster: RNA binding domain protein; n=3; Tricho... 34 3.8
UniRef50_UPI000065D989 Cluster: RNA-binding protein 28 (RNA-bind... 34 5.1
UniRef50_Q0IHY7 Cluster: Ribonucleoprotein, PTB-binding 2; n=4; ... 34 5.1
UniRef50_Q97IB5 Cluster: Predicted kinase related to hydroxyacet... 34 5.1
UniRef50_Q16WH3 Cluster: RNA and export factor binding protein 2... 34 5.1
UniRef50_A6QTN4 Cluster: Putative uncharacterized protein; n=1; ... 34 5.1
UniRef50_Q7SYS2 Cluster: MKI67 FHA domain-interacting nucleolar ... 34 5.1
UniRef50_A6GEZ0 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_A2Y2Y7 Cluster: Putative uncharacterized protein; n=2; ... 33 6.7
UniRef50_Q4QFQ1 Cluster: Putative uncharacterized protein; n=3; ... 33 6.7
UniRef50_A0BPD6 Cluster: Chromosome undetermined scaffold_12, wh... 33 6.7
UniRef50_Q76IQ0 Cluster: Putative uncharacterized protein SGN1; ... 33 6.7
UniRef50_Q86U42 Cluster: Polyadenylate-binding protein 2 (Poly(A... 33 6.7
UniRef50_Q6CEW9 Cluster: Multiple RNA-binding domain-containing ... 33 6.7
UniRef50_UPI00006CF237 Cluster: hypothetical protein TTHERM_0005... 33 8.9
UniRef50_Q4RJP2 Cluster: Chromosome 13 SCAF15035, whole genome s... 33 8.9
UniRef50_Q5E219 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
UniRef50_Q10YS3 Cluster: Putative uncharacterized protein; n=1; ... 33 8.9
UniRef50_A4RXT9 Cluster: Predicted protein; n=1; Ostreococcus lu... 33 8.9
UniRef50_Q5KBW2 Cluster: Polyadenylate-binding protein, cytoplas... 33 8.9
>UniRef50_UPI00015B4335 Cluster: PREDICTED: similar to eukaryotic
translation initiation factor 3 subunit 4; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to eukaryotic
translation initiation factor 3 subunit 4 - Nasonia
vitripennis
Length = 293
Score = 241 bits (590), Expect = 2e-62
Identities = 125/247 (50%), Positives = 152/247 (61%), Gaps = 14/247 (5%)
Frame = +3
Query: 138 EFQASWADEVEIDQG--VLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSK 311
E +SWADEVE D+G LPPPS + EN KI+TEYK + DNKKVK+VRTY++EKR VSK
Sbjct: 7 EVSSSWADEVE-DEGNITLPPPSIIYENDFKIMTEYKLNEDNKKVKVVRTYRVEKRTVSK 65
Query: 312 SIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSN 491
SIA RK W+KFGDS +D PGPNPATT +AEDVFMQF++ KEE + ++ LD LK
Sbjct: 66 SIAVRKNWAKFGDSTNDGPGPNPATTVIAEDVFMQFLSGKEEDNKVEEDALDKLKSLVEK 125
Query: 492 VIFKCRTCQGDHLTLYCPFKHTQIXXXXXXXXXXXXXXXXXX----------SNKYIPPS 641
KCR C G+H T CPFK T + +KY+PPS
Sbjct: 126 GAVKCRNCSGEHWTSKCPFKDTVLGGTSKVPEDKKLPNASAAPGLPEIGKPQGSKYVPPS 185
Query: 642 --SAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGH 815
G G RR+D AIRISNL +AD+++LVK FG + KLYLAKEK+T
Sbjct: 186 MRDGGNKRGDSMQMQRRDDFAAIRISNLSESTTDADLEELVKPFGAIQKLYLAKEKNTNS 245
Query: 816 CXGFAYV 836
C GFAYV
Sbjct: 246 CKGFAYV 252
>UniRef50_Q9W4X7 Cluster: CG8636-PA; n=8; Endopterygota|Rep:
CG8636-PA - Drosophila melanogaster (Fruit fly)
Length = 269
Score = 234 bits (573), Expect = 2e-60
Identities = 121/245 (49%), Positives = 158/245 (64%), Gaps = 7/245 (2%)
Frame = +3
Query: 123 MPVAEEFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV 302
MP E ++SWADEVE+D G LPP +E VENG K VTEYKY+ D+KK K+VRTYKI K+V
Sbjct: 1 MPGVETIKSSWADEVELDYGGLPPTTETVENGQKYVTEYKYNKDDKKTKVVRTYKISKQV 60
Query: 303 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPP 482
V K++AKR+TW+KFGDS +DKPGPN TT V+E++ MQF+ SKE+ ++ +D LD P
Sbjct: 61 VPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKED-EKANDPLLD----P 115
Query: 483 SSNVIFKCRTCQGDHLTLYCPFKHTQIXX---XXXXXXXXXXXXXXXXSNKYIPP----S 641
+ N I KCR C G+H ++ CP+K T + S KY+PP S
Sbjct: 116 TKN-IAKCRICNGEHWSVNCPYKGTAMDTNMMEKKASAAAAAAVDAPKSGKYVPPFLKDS 174
Query: 642 SAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCX 821
G + R R+D AIRISNL EAD+++LVK GP K+YLA++K+TG C
Sbjct: 175 QKGALGMRG-----RDDTAAIRISNLSESMTEADLEELVKKIGPQSKMYLARDKNTGLCK 229
Query: 822 GFAYV 836
GFAYV
Sbjct: 230 GFAYV 234
>UniRef50_Q9VDM6 Cluster: CG10881-PA; n=2; Sophophora|Rep:
CG10881-PA - Drosophila melanogaster (Fruit fly)
Length = 273
Score = 205 bits (500), Expect = 1e-51
Identities = 110/242 (45%), Positives = 150/242 (61%), Gaps = 10/242 (4%)
Frame = +3
Query: 141 FQASWADEVEIDQ-GVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSI 317
F SWADEV+ D LPP +E ++ K VTEYK+++D KKVK+VRT+KIEK++V K++
Sbjct: 4 FVTSWADEVDADYVDGLPPSNEYIKGDFKYVTEYKFNDDGKKVKVVRTFKIEKQIVPKAV 63
Query: 318 AKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVI 497
A+R+ W KFGDS SDKPGPN TT +E++FMQFI SK+ Q + +LD P N I
Sbjct: 64 ARRRNWVKFGDSRSDKPGPNSQTTMASEEIFMQFIGSKDFDQ-THETQLD----PGKN-I 117
Query: 498 FKCRTCQGDHLTLYCPFKHTQIXXXXXXXXXXXXXXXXXXSN-----KYIPP--SSAGRI 656
KCR C G+H ++ CP+K T + S+ KY+PP G I
Sbjct: 118 AKCRICNGEHWSVNCPYKGTSMDSKTVMETKANAAAAAAISDPSKTGKYVPPFMKDGGGI 177
Query: 657 PG-RDQPPVR-REDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFA 830
G ++ R R+D +A+RISNL E D+++LVK GP K+YLA+EK++G C GFA
Sbjct: 178 SGSKNWGRGRDRDDSSAVRISNLSESMTETDLEELVKKIGPHTKMYLAREKNSGLCKGFA 237
Query: 831 YV 836
YV
Sbjct: 238 YV 239
>UniRef50_O75821 Cluster: Eukaryotic translation initiation factor 3
subunit 4; n=36; Eumetazoa|Rep: Eukaryotic translation
initiation factor 3 subunit 4 - Homo sapiens (Human)
Length = 320
Score = 175 bits (427), Expect = 9e-43
Identities = 97/235 (41%), Positives = 128/235 (54%), Gaps = 18/235 (7%)
Frame = +3
Query: 186 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDK 365
LPPP EV+ +K VTEYK D D KK KIVRT++IE R SK++A+RK W KFG+S D
Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIETRKASKAVARRKNWKKFGNSEFDP 112
Query: 366 PGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCP 545
PGPN ATT V++DV M FITSKE+ + E D + I CR C+GDH T CP
Sbjct: 113 PGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMNKLKGQKIVSCRICKGDHWTTRCP 170
Query: 546 FKHT----------QIXXXXXX-----XXXXXXXXXXXXSNKYIPPS---SAGRIPGRDQ 671
+K T Q+ + KY+PPS A R Q
Sbjct: 171 YKDTLGPMQKELAEQLGLSTGEKEKLPGELEPVQATQNKTGKYVPPSLRDGASRRGESMQ 230
Query: 672 PPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
P R +D IR++NL E D+ +L + FG + ++YLAK+K+TG GFA++
Sbjct: 231 PNRRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFI 285
>UniRef50_Q4P7G1 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 308
Score = 126 bits (304), Expect = 7e-28
Identities = 78/254 (30%), Positives = 126/254 (49%), Gaps = 25/254 (9%)
Frame = +3
Query: 150 SWADEV-EIDQGVLPPPSEVVE-NGLKIVTEYKYDNDNKKVKIVRTYK--IEKRVVSKSI 317
+WADE E G P E E NG+K+V EY+ + D KK+KI R K + K V+ +
Sbjct: 19 NWADEFDEPVVGDAPRIEERDEGNGVKVVIEYRTNPDGKKIKITRRVKRTLVKTKVNHEV 78
Query: 318 AKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVI 497
A+RKTW+KFG GP+ ATT + E+V ++ +++ ++ P+ ++D ++ +N
Sbjct: 79 AERKTWTKFGQEKGKAAGPHSATTTIGENVVLK-MSAGNKTAEPEVDDMDKMRQQLANKR 137
Query: 498 FKCRTCQGDHLTLYCPFKHTQIXXXXXXXXX----------------XXXXXXXXXSNKY 629
CR C+GDH T CP+K T KY
Sbjct: 138 IVCRLCKGDHFTTKCPYKDTLEAIPGAGADTPEGGDGSMTPLAGMDPTNPAVAASAGGKY 197
Query: 630 IPPSSAGRIPGRDQP-----PVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLA 794
+PPS G G + + R+D+ +R++NL A + D+ +L FG V ++Y+
Sbjct: 198 VPPSMRGGAKGPGEKMGGLGGMSRDDLPTLRVTNLSEDADDDDLRELFMRFGRVVRVYVG 257
Query: 795 KEKSTGHCXGFAYV 836
+++ TG C G+A+V
Sbjct: 258 RDRETGICKGYAFV 271
>UniRef50_P78795 Cluster: Probable eukaryotic translation initiation
factor 3 RNA-binding subunit; n=1; Schizosaccharomyces
pombe|Rep: Probable eukaryotic translation initiation
factor 3 RNA-binding subunit - Schizosaccharomyces pombe
(Fission yeast)
Length = 282
Score = 119 bits (286), Expect = 1e-25
Identities = 76/244 (31%), Positives = 122/244 (50%), Gaps = 16/244 (6%)
Frame = +3
Query: 153 WADEVEIDQGVLPPPSEVVEN--GLKIVTEYKYDNDNKKVKIVRTYK---IEKRVVSKSI 317
WAD+ + G+ P + +N G K + E++ D++ KKVK+ R + I +RV ++
Sbjct: 9 WADDEDYGTGL--PSIQTFDNPDGTKTMIEFRIDDNGKKVKVTRVIRKTVITERV-QHAV 65
Query: 318 AKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQ----FITSKEESQRPDDGELDGLKPPS 485
A+RK W KFG A G + TT+V E+V ++ + T+KEE Q +K
Sbjct: 66 AERKKWKKFGKEAGKNSGVDARTTSVGENVQLRLQLGWTTTKEEEQDEAALAAAKVKAKG 125
Query: 486 SNVIFKCRTCQGDHLTLYCPFKH----TQIXXXXXXXXXXXXXXXXXXSNKYIPP---SS 644
S+V+ +CR C+G+H T CP+K +YI P +
Sbjct: 126 SSVV-RCRACKGNHFTAQCPYKSIIGPVDEPPLDASPVSSRASGALGEKGRYIAPHLRAG 184
Query: 645 AGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXG 824
+GR G R+D +R++NL + E ++ DL + FG + ++YLAK+K TG G
Sbjct: 185 SGRESGDSMFKRERDDSATLRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKG 244
Query: 825 FAYV 836
FA+V
Sbjct: 245 FAFV 248
>UniRef50_Q5DF32 Cluster: SJCHGC06618 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06618 protein - Schistosoma
japonicum (Blood fluke)
Length = 281
Score = 118 bits (283), Expect = 2e-25
Identities = 77/245 (31%), Positives = 108/245 (44%), Gaps = 15/245 (6%)
Frame = +3
Query: 147 ASWADEVEIDQGVLPPPSEVV--ENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIA 320
ASW D++ D LPP E E +K V Y Y++D +K + Y+ EKRVV+ +A
Sbjct: 3 ASWTDDLNEDSE-LPPVEEKFDPERNIKTVIRYFYNDDGDLIKETKEYQKEKRVVASRVA 61
Query: 321 KRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIF 500
RK W KFG S SD PG N A T A+ V MQ + +++ Q E K +
Sbjct: 62 DRKKWRKFGASKSDPPGGNLANTYPADIVTMQIVQARQPEQEQKRQEEVNAKVKLGEPVV 121
Query: 501 KCRTCQGDHLTLYCPFK---------HTQIXXXXXXXXXXXXXXXXXXSNKYIPPS---S 644
C C+G H T CP+K Q+ +YIPPS
Sbjct: 122 ACSYCKGGHFTRTCPYKSDMEAMQLLQEQLRAKTEPTEESVKEPQSDRPGRYIPPSLRGD 181
Query: 645 AGRIPGRDQPPVRRE-DVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCX 821
A G +R D +R++NL D+ + FG V ++Y AK+K T
Sbjct: 182 AANTTGSSMSTDKRPFDENTVRVTNLAPDTTVDDLKAMFSAFGHVMRIYPAKDKLTQQNR 241
Query: 822 GFAYV 836
GFA++
Sbjct: 242 GFAFI 246
>UniRef50_Q6BT10 Cluster: Debaryomyces hansenii chromosome D of
strain CBS767 of Debaryomyces hansenii; n=6;
Saccharomycetales|Rep: Debaryomyces hansenii chromosome
D of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 276
Score = 112 bits (270), Expect = 9e-24
Identities = 79/243 (32%), Positives = 118/243 (48%), Gaps = 14/243 (5%)
Frame = +3
Query: 150 SWADEVEIDQGVLPPPSEVVEN--GLKIVTEYKYDNDNKKVKIVRTYKIEK--RVVSKSI 317
SWAD + +P P E+ N G K V Y+ + + +KVKI + K K V I
Sbjct: 8 SWADA----EDEIPTP-EITTNPDGTKTVVSYRLNANGQKVKITQKIKEVKVKEKVHPLI 62
Query: 318 AKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPP-SSNV 494
A+RK W+K+G + PGP+ TT + E V ++ TS +E ++ ++ + K S
Sbjct: 63 AQRKNWAKYGKEKNTPPGPDTRTTQLGEKVELKLGTSWKEIEKQEEESKEEQKAQLVSTQ 122
Query: 495 IFKCRTCQGDHLTLYCPFKHTQIXXXXXXXXXXXXXXXXXXSN---KYIP----PSSAGR 653
KCRTC GDH T CPFK T I N KY+P + G
Sbjct: 123 RIKCRTCGGDHFTSKCPFKDTLISDSTDASNAATPEPADDGMNAPGKYVPRHLRKDANGN 182
Query: 654 IPGRDQPPVRREDVTAIRISNLXNFAVEADI--DDLVKGFGPVHKLYLAKEKSTGHCXGF 827
+P +D R+D T ++IS L N V+ D+ ++L+ +GP + + + + TG GF
Sbjct: 183 MPAKDLKD--RDDSTTLKISQL-NSIVDEDMLRNELLGRYGPFQRAIVVRNRETGESRGF 239
Query: 828 AYV 836
AYV
Sbjct: 240 AYV 242
>UniRef50_A7T5A6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 168
Score = 109 bits (263), Expect = 6e-23
Identities = 52/95 (54%), Positives = 66/95 (69%)
Frame = +3
Query: 267 KIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQR 446
+I+ TY++E R V+K IAKRK W KFGDS +DKPGPN TTNV +DVF+ +TS +E+
Sbjct: 26 EIITTYRVETRRVAKEIAKRKLWKKFGDSKNDKPGPNKTTTNVCDDVFL-ILTSNKEN-- 82
Query: 447 PDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFK 551
PD E D LK S I +CR C+GDH T CP+K
Sbjct: 83 PDATEEDPLKKLSGQKIVQCRICKGDHWTTKCPYK 117
>UniRef50_Q9FI86 Cluster: Eukaryotic translation initiation factor 3
subunit-like protein; n=12; Magnoliophyta|Rep:
Eukaryotic translation initiation factor 3 subunit-like
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 308
Score = 109 bits (262), Expect = 8e-23
Identities = 72/238 (30%), Positives = 115/238 (48%), Gaps = 12/238 (5%)
Frame = +3
Query: 159 DEVEIDQGVLPPPSEVV---ENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRK 329
DE E D L PP +++ +NG+K V EYK++ ++KKVKI T +++KR ++K +R+
Sbjct: 18 DEEEGDYDFLLPPKQMISPDQNGVKKVIEYKFNEEDKKVKITTTTRVQKRALTKQAVERR 77
Query: 330 TWSKFGDSASDKPGPNPATTNVAEDVFMQFIT---SKEESQRPDDGELDGLKPPSSNVIF 500
+W+KFGD+A ++ + T ED+ ++ I S E + L P + V+
Sbjct: 78 SWNKFGDAAHEE-SSSYLTMRSTEDIILERIRAPGSNAEQSTVSGDSMSQLGKPGA-VLM 135
Query: 501 KCRTCQ--GDHLTLYCPFKH-TQIXXXXXXXXXXXXXXXXXXSNKYIPPS---SAGRIPG 662
CR CQ GDH T CP K + Y+PPS A R G
Sbjct: 136 VCRLCQKKGDHWTSRCPQKDLLSLMDEPLTAETSTSTITGTGRAAYVPPSMREGADRKAG 195
Query: 663 RDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
R D ++R++NL D+ +L + FG V + ++A ++ T GF +V
Sbjct: 196 GSDMR-SRHDENSVRVTNLSEDTRGPDLMELFRPFGAVTRCHVAIDQKTSMSRGFGFV 252
>UniRef50_Q016G8 Cluster: Initiation factor 3g; n=2;
Ostreococcus|Rep: Initiation factor 3g - Ostreococcus
tauri
Length = 311
Score = 107 bits (258), Expect = 3e-22
Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 5/214 (2%)
Frame = +3
Query: 210 ENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSK---SIAKRKTWSKFGDSASDKPGPNP 380
E G+ Y+ ++ + K V+ YK E VV K + +RKTW KFGD+ KPG
Sbjct: 64 EEGVMTSITYQINDAGVRTKTVKRYK-EHEVVKKVTPGMLERKTWEKFGDAKRYKPGDES 122
Query: 381 ATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTC--QGDHLTLYCPFKH 554
T E++F++ + +S+ + + + CRTC +GDH T CP+K
Sbjct: 123 MTAVSLEEIFLEKTRVQPKSELEKASDPLAAMASAQTSLLVCRTCGKKGDHWTSKCPYK- 181
Query: 555 TQIXXXXXXXXXXXXXXXXXXSNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLXNFAV 734
+ Y+PPS G RR D +IR+SNL
Sbjct: 182 -DLANDGSKPPDEDGAFGARKPGGYVPPSMRAGATGTGASMDRRRDENSIRVSNLSEDTR 240
Query: 735 EADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
E D+ +L + FGPV ++Y+A + TG GFA+V
Sbjct: 241 EQDLQELFRPFGPVTRIYVAINRDTGEARGFAFV 274
>UniRef50_A7PNS9 Cluster: Chromosome chr8 scaffold_23, whole genome
shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome
chr8 scaffold_23, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 293
Score = 107 bits (256), Expect = 5e-22
Identities = 76/241 (31%), Positives = 110/241 (45%), Gaps = 15/241 (6%)
Frame = +3
Query: 159 DEVEIDQGVLPPPSEVV--ENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV---VSKSIAK 323
D+ E +LPPP + +NG+K V EYK+++D KVKI T ++ K +SK +
Sbjct: 20 DDTEDLDFLLPPPQVIGPDDNGIKKVIEYKFNDDGDKVKITTTTRVRKLANARLSKRAVE 79
Query: 324 RKTWSKFGDSASDKPGPNPATTNVAEDVFMQFIT--SKEESQRPDDGELDGLKPPSSNVI 497
R++W KFGD+ + G + E + + SK E G+ V+
Sbjct: 80 RRSWPKFGDAIHEDVGSRLTMVSTEEILIERPRAHGSKAEETNTVGGDSLAQLTKGGAVL 139
Query: 498 FKCRTC--QGDHLTLYCPFKHTQIXXXXXXXXXXXXXXXXXXS---NKYIPPS---SAGR 653
CRTC +GDH T CP+K S Y+PPS A R
Sbjct: 140 MVCRTCGKKGDHWTSRCPYKDLAPQPEAFIDKPTASDPTAAASVTKGAYVPPSMRAGADR 199
Query: 654 IPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAY 833
G D RR + A+R+SNL EAD+ +L FG + ++Y+A + TG GF Y
Sbjct: 200 SSGTDMR--RRNEENAVRVSNLSEDTHEADLRELFSRFGQLTRVYVAIDHKTGLSRGFGY 257
Query: 834 V 836
V
Sbjct: 258 V 258
>UniRef50_Q6C747 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 294
Score = 99.1 bits (236), Expect = 1e-19
Identities = 67/253 (26%), Positives = 116/253 (45%), Gaps = 18/253 (7%)
Frame = +3
Query: 132 AEEFQASWADEVEIDQGVLPPPSEVVEN--GLKIVTEYKYDNDNKKVK---IVRTYKIEK 296
+E+F+ + DE D P ++ +N G K + ++ D D KK K ++ + +
Sbjct: 11 SEDFRQNTMDEKWADDDEFSTP-QITQNADGTKTIVTHRMD-DGKKYKRSVTIKNQSVTE 68
Query: 297 RVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAED-VFMQFITSKEESQRPDDGELDGL 473
+V++ +A+R W+K+G PGPN TT + ED VF+ + S + + ++ E
Sbjct: 69 KVLN-CVAERSKWTKYGKELGAPPGPNRMTTTIGEDIVFVLGLKSDQPEEEVEEEEAAAA 127
Query: 474 KPP-SSNVIFKCRTCQGDHLTLYCPFKHTQIXXXXXXXXXXXXX----XXXXXSNKYIPP 638
P + KCR CQG H T CP+K T + Y+PP
Sbjct: 128 APRVGEDKGVKCRLCQGPHFTSKCPYKETLGGSTAAGGMGRSLGGDEPAGAAKTGGYVPP 187
Query: 639 SSAGRIPGRDQPPVRR-------EDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAK 797
+ PG P +D +R++NL A + D+ + +G ++++Y+AK
Sbjct: 188 HLRNKGPGGPGGPGGAAGGRSDDDDELTLRVTNLSEEATDDDLRRMFGKYGMINRVYVAK 247
Query: 798 EKSTGHCXGFAYV 836
++ TG GFA+V
Sbjct: 248 DRDTGRPRGFAFV 260
>UniRef50_Q5K9M4 Cluster: Eukaryotic translation initiation factor
3, subunit 4 delta, 44kDa, putative; n=1; Filobasidiella
neoformans|Rep: Eukaryotic translation initiation factor
3, subunit 4 delta, 44kDa, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 290
Score = 95.9 bits (228), Expect = 1e-18
Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 19/257 (7%)
Frame = +3
Query: 123 MPVAEEFQASWA-DEVEIDQGVLPPPSEVVE-NGLKIVTEYKYDNDNKKVKIVRTYK--I 290
M +++ WA D+V+ D+ LPP +E + NG+ + +KY+ D++KVK+ R + +
Sbjct: 1 MADSKQSNRDWAADDVDADE--LPPTTESTDANGITTIVSWKYNADDQKVKVTRRVRRRL 58
Query: 291 EKRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDG 470
+ V++++A+RK W KFG PGP+ TT + E++ + I + QR +
Sbjct: 59 QVSTVTQTMAERKQWPKFGLDKGKPPGPDRKTTIIGENLHFK-IAPISKIQRVEPEPETA 117
Query: 471 LKPPSSNVIFKCRTCQGDHLTLYCPFKHTQIX-----------XXXXXXXXXXXXXXXXX 617
+K P+ + CR C G H T CPF+
Sbjct: 118 VKAPTGKAVV-CRLCSGQHYTARCPFREQLAAIDNLNADGAEEEQVVVSGTLAAKGAGET 176
Query: 618 SNKYIPPSS-AGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGF---GPVHKL 785
KY+PPS AG D R+++ +R+++L A E D+ L + F G + +
Sbjct: 177 GGKYVPPSQRAGATGAGDSMFRARDELPTLRVTSLSIDAEEDDLRALFQPFAKNGKLGRA 236
Query: 786 YLAKEKSTGHCXGFAYV 836
+ ++++T G A+V
Sbjct: 237 NIVRDRNTRVSKGLAFV 253
>UniRef50_Q19706 Cluster: Probable eukaryotic translation initiation
factor 3 subunit 4; n=2; Caenorhabditis|Rep: Probable
eukaryotic translation initiation factor 3 subunit 4 -
Caenorhabditis elegans
Length = 256
Score = 86.6 bits (205), Expect = 7e-16
Identities = 68/230 (29%), Positives = 102/230 (44%), Gaps = 1/230 (0%)
Frame = +3
Query: 150 SWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRK 329
SWA+ VE D P + +G + T + + D + K+V +K+ + V K +A RK
Sbjct: 9 SWAEAVEQDNA---PHIQEGADGTRTETAFT-EVDGVRWKVVTQFKVINKRVPKVVADRK 64
Query: 330 TWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCR 509
W KFG + GP ATT VAE+V MQF ++ Q D E +S CR
Sbjct: 65 KWVKFGSCKGEPAGPQVATTYVAEEVDMQFTRNRAGEQILDVQEDKQTAKTTSRE--HCR 122
Query: 510 TCQG-DHLTLYCPFKHTQIXXXXXXXXXXXXXXXXXXSNKYIPPSSAGRIPGRDQPPVRR 686
C+G DH + +CP+K + + G P Q R
Sbjct: 123 HCKGNDHWSTHCPYK----------VMYQLDEEADADKDTEKDRMAMGMRPDGRQIDRNR 172
Query: 687 EDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
D R++NL E ++ DL G V ++++A++K TG GFA+V
Sbjct: 173 SDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFV 222
>UniRef50_Q04067 Cluster: Eukaryotic translation initiation factor 3
RNA-binding subunit; n=6; Saccharomycetales|Rep:
Eukaryotic translation initiation factor 3 RNA-binding
subunit - Saccharomyces cerevisiae (Baker's yeast)
Length = 274
Score = 80.2 bits (189), Expect = 6e-14
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 23/237 (9%)
Frame = +3
Query: 195 PSEVVEN--GLKIVTEYKYDNDNKKVKIVRTYKIEKRV--VSKSIAKRKTWSKFGDSASD 362
P E++EN G + + YK + D K KI + K K + V KS+A+RK W K+G
Sbjct: 6 PEEIIENADGSRSIITYKIE-DGVKYKITQKVKEVKVLEKVHKSVAERKNWHKYGSEKGS 64
Query: 363 KPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYC 542
GP+ T + E+V ++ + +++ ++ + K + +CR C DH+T+ C
Sbjct: 65 PAGPSAVTARLGEEVELRLSRNWKQA---EEERIQKEKASLTKTGLQCRLCGNDHMTMNC 121
Query: 543 PFKHTQIXXXXXXXXXXXXXXXXXXS-NKYIPPSSAGRIPGRDQPPVR------------ 683
PFK S K AG IPG+ PP R
Sbjct: 122 PFKTILSELSALEDPATNEGGVEAASEEKAGQVGGAGSIPGQYVPPSRRAGARDPSSDAY 181
Query: 684 -----REDVTAIRISNLXNFAVEADI-DDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
R+D+ ++I + A E + ++L+ F P+ ++ + + K TG G A+V
Sbjct: 182 RDSRERDDMCTLKIMQVNENADENSLREELLFPFAPIPRVSVVRNKETGKSRGLAFV 238
>UniRef50_Q54WM4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 233
Score = 67.7 bits (158), Expect = 3e-10
Identities = 56/210 (26%), Positives = 89/210 (42%)
Frame = +3
Query: 207 VENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNPAT 386
+E ++++ + + K +K + Y+I + ++ + +RK W KFG+ +K G
Sbjct: 12 IEKTIEVIVKNDKGEEVKVIKRYQEYQITVKR-NRKVDERKKWKKFGE-CDNKTGLE--N 67
Query: 387 TNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFKHTQIX 566
T ++ F+ E + D + KCR C+ +H T CP+K
Sbjct: 68 TAYGDEQFLVLTRGAEVKEEEKD-------------VVKCRICKKNHFTTKCPYKDA--- 111
Query: 567 XXXXXXXXXXXXXXXXXSNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADI 746
SNKYI P+ G G P DV +I +SNL A E D+
Sbjct: 112 LELTTQPQKSEKEEKPISNKYIAPNLRGGYTG--SAP-SGSDVPSIMVSNLSQNATEKDL 168
Query: 747 DDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
+L FGPV ++ + K G GFAYV
Sbjct: 169 YELFGQFGPVSRVSIPKSME-GSSKGFAYV 197
>UniRef50_A7TJ86 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 131
Score = 58.0 bits (134), Expect = 3e-07
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 5/121 (4%)
Frame = +3
Query: 198 SEVVE--NGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKS---IAKRKTWSKFGDSASD 362
SEV+ +G K + Y + N++ KI + +K E V+ + + RK W+K+G A+
Sbjct: 7 SEVITAADGTKTLITYVIEG-NERYKISQNFK-EINVLERVDPVVDARKKWAKYGAEANS 64
Query: 363 KPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYC 542
PGP TTN E+V FI SK + + E + LK + V CR C +H T C
Sbjct: 65 PPGPGYDTTNPGENV--TFILSKNWRELTEIEEANRLK-KNPKVYISCRACSQNHYTFKC 121
Query: 543 P 545
P
Sbjct: 122 P 122
>UniRef50_Q1JTC8 Cluster: Eukaryotic translation initiation
factor,putative; n=2; Toxoplasma gondii|Rep: Eukaryotic
translation initiation factor,putative - Toxoplasma
gondii RH
Length = 295
Score = 56.8 bits (131), Expect = 6e-07
Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 3/212 (1%)
Frame = +3
Query: 210 ENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV--VSKSIAKRKTWSKFG-DSASDKPGPNP 380
E G+K VT Y + +K+ + K+ ++ ++K + RK FG D+A P +
Sbjct: 52 EEGVKTVTTYTQTLRGETLKVTKRIKVIRKCQRINKDVYARKNIVPFGLDAADGDPSLSA 111
Query: 381 ATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFKHTQ 560
T E++ ++ S ++ + ++ E D N R + L +
Sbjct: 112 TTVRSHEEIIIEVPRSSKQRKFKEEEEEDDFYMGDLNPSKTSRDLRQKFRAL----REDD 167
Query: 561 IXXXXXXXXXXXXXXXXXXSNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLXNFAVEA 740
+ KYIP + +D RRE+ T IR++NL +
Sbjct: 168 EAGAAGGDGDEETGLRSAGAGKYIPRARREGETLKDVENRRREECT-IRVTNLSEDVKDE 226
Query: 741 DIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
D+ +L G + ++YLAK K GFA++
Sbjct: 227 DLTELFGKIGKIDRIYLAKHKEKKCSKGFAFI 258
>UniRef50_A7AQH9 Cluster: Translation initiation factor 3 subunit,
putative; n=1; Babesia bovis|Rep: Translation initiation
factor 3 subunit, putative - Babesia bovis
Length = 268
Score = 50.0 bits (114), Expect = 7e-05
Identities = 27/71 (38%), Positives = 39/71 (54%)
Frame = +3
Query: 624 KYIPPSSAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEK 803
KY+PPS R G D+ R D +R++NL E D+ +L G +H+ YLAK K
Sbjct: 165 KYVPPS---RKEGGDR---RNFDENTVRVTNLSEDVREKDLVELFSRVGRIHRAYLAKHK 218
Query: 804 STGHCXGFAYV 836
T + GFA++
Sbjct: 219 ETQYSKGFAFI 229
>UniRef50_Q4N900 Cluster: Eukaryotic translation initiation factor 3
subunit 4, putative; n=2; Theileria|Rep: Eukaryotic
translation initiation factor 3 subunit 4, putative -
Theileria parva
Length = 266
Score = 47.2 bits (107), Expect = 5e-04
Identities = 54/210 (25%), Positives = 89/210 (42%), Gaps = 3/210 (1%)
Frame = +3
Query: 216 GLKIVTEYKYDNDNKKVKI---VRTYKIEKRVVSKSIAKRKTWSKFGDSASDKPGPNPAT 386
G+K + Y ++ VKI V+ ++ KR+ KS+ +RK F + + G + +
Sbjct: 45 GIKSLVSYSRNSRGHSVKITKRVKEIRVSKRI-HKSVFERKNLVPFNLTDENDTGSSFVS 103
Query: 387 TNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLTLYCPFKHTQIX 566
E++ ++ ++ + DD +L P +N + R L FK +
Sbjct: 104 N---EEIIIELSRNERRLNQDDDSDLI-YSPVDANFLKLSRD-------LKLKFKSLK-- 150
Query: 567 XXXXXXXXXXXXXXXXXSNKYIPPSSAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADI 746
KY+PPS R G ++ R D IRI+NL E D+
Sbjct: 151 ----EEDNVPEEVEEEAPAKYVPPS---RKEGGER---RSFDDNTIRITNLSEDIREKDL 200
Query: 747 DDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
+L G +H+ YLAK K T + GFA+V
Sbjct: 201 TELFGRVGRIHRAYLAKYKETQNPKGFAFV 230
>UniRef50_Q5CWM4 Cluster: U2 snRNP. Hsh49p, RRM domain containing
protein; n=3; Cryptosporidium|Rep: U2 snRNP. Hsh49p, RRM
domain containing protein - Cryptosporidium parvum Iowa
II
Length = 216
Score = 39.1 bits (87), Expect = 0.14
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +3
Query: 639 SSAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHC 818
S + RIP QP R + NL N E + +L GPV +++ ++K TGH
Sbjct: 5 SISNRIP-EIQPIYERNQEATLYCGNLENKVDEEMLAELFSQCGPVKSVHIPRDKVTGHH 63
Query: 819 XGFAYV 836
GF ++
Sbjct: 64 SGFGFI 69
>UniRef50_Q48A10 Cluster: RNA-binding protein; n=2;
Alteromonadales|Rep: RNA-binding protein - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 160
Score = 37.9 bits (84), Expect = 0.31
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +3
Query: 687 EDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
EDV + + NL A E + +L G VH + L K+K TG GF +V
Sbjct: 68 EDVRTLYVGNLPYRANETSVRELFSEHGSVHSVRLMKDKHTGKRRGFGFV 117
>UniRef50_Q4QI26 Cluster: RNA-binding protein 5-like protein; n=3;
Leishmania|Rep: RNA-binding protein 5-like protein -
Leishmania major
Length = 298
Score = 37.5 bits (83), Expect = 0.41
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +3
Query: 675 PVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
P R + + +++L + +AD+ +L K FGP+ + K T HC G+ +V
Sbjct: 96 PAARAYDSNLYVASLPEWFTDADLHELFKRFGPIVSAKVMCHKGTHHCKGYGFV 149
>UniRef50_Q9SEU4 Cluster: Serine/arginine-rich protein; n=22;
Eukaryota|Rep: Serine/arginine-rich protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 287
Score = 37.1 bits (82), Expect = 0.55
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +3
Query: 636 PSSAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGH 815
PS GR GR R+ T++ + NL + + D+ + FGPV +YL ++ TG
Sbjct: 21 PSPRGRYGGRS-----RDLPTSLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGD 75
Query: 816 CXGFAYV 836
GF +V
Sbjct: 76 PRGFGFV 82
>UniRef50_Q7RS26 Cluster: Eukaryotic translation initiation factor 3
p42; n=5; Plasmodium|Rep: Eukaryotic translation
initiation factor 3 p42 - Plasmodium yoelii yoelii
Length = 300
Score = 37.1 bits (82), Expect = 0.55
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 702 IRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
IR++NL E+++ +L G + +++LAK K T + GFA++
Sbjct: 221 IRVTNLSEDVNESELSNLFGRVGQISRMFLAKHKETQNSKGFAFI 265
>UniRef50_Q16YD3 Cluster: RNA-binding protein, putative; n=2;
Culicidae|Rep: RNA-binding protein, putative - Aedes
aegypti (Yellowfever mosquito)
Length = 603
Score = 36.3 bits (80), Expect = 0.95
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 687 EDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
E+ + I N+ A E+ I D++ FG V K+ + KE+ +GH G A+V
Sbjct: 179 EEGRTVFIKNVPYDADESTIKDVMSQFGTVEKVLINKERVSGHSKGTAFV 228
>UniRef50_UPI0000E486B1 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 352
Score = 35.9 bits (79), Expect = 1.3
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 627 YIPPSSAGRIPGRDQPPVR-REDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEK 803
Y PP+S R D+ + E + ++ L + D+ DL+ G G + ++ L ++
Sbjct: 242 YEPPTSQHRTRSADENSSQVLEGPNVLELTGLPTNLSKEDLGDLLMGCGEIVEMRLLQDT 301
Query: 804 STGHCXGFAYV 836
G C G AYV
Sbjct: 302 DLGACIGLAYV 312
>UniRef50_UPI0000660E03 Cluster: Homolog of Homo sapiens "MEGF10
protein; n=1; Takifugu rubripes|Rep: Homolog of Homo
sapiens "MEGF10 protein - Takifugu rubripes
Length = 192
Score = 35.9 bits (79), Expect = 1.3
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 752 PCQRFWPCA*TVPCEGKKYWTLXRICLC 835
PC R WPC T PC G W R C C
Sbjct: 116 PCHRTWPCHGTWPCHGT--WPCHRTCTC 141
>UniRef50_Q08NH3 Cluster: Iron-regulated protein A; n=1; Stigmatella
aurantiaca DW4/3-1|Rep: Iron-regulated protein A -
Stigmatella aurantiaca DW4/3-1
Length = 366
Score = 35.9 bits (79), Expect = 1.3
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +3
Query: 633 PPSSAGRIPGRDQPPVRREDVTAIRISNLXNFAVE--ADIDDLVKGFGPVHKLYLAKEKS 806
P S G P D PV R D+ A+ N F E ++++ +KGF V L A++ S
Sbjct: 102 PVDSFGYDPAMDSWPVNRSDLDAVLAGN-APFTPEYVGNLEETLKGFHTVEYLLFARDPS 160
Query: 807 TG 812
TG
Sbjct: 161 TG 162
>UniRef50_O42847 Cluster: RNA-binding protein; n=1;
Schizosaccharomyces pombe|Rep: RNA-binding protein -
Schizosaccharomyces pombe (Fission yeast)
Length = 121
Score = 35.9 bits (79), Expect = 1.3
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +3
Query: 675 PVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
P + + I ++ + A E ++DL FGPV L+L ++ TG+ G+A +
Sbjct: 3 PAKSVEGYIIIVTGVHPEATEEQVEDLFADFGPVKNLHLNLDRRTGYVKGYALI 56
>UniRef50_Q5GAI2 Cluster: Deoxyribonucleoside kinase/thymidine
kinase; n=2; Singapore grouper iridovirus|Rep:
Deoxyribonucleoside kinase/thymidine kinase - Grouper
iridovirus
Length = 191
Score = 35.1 bits (77), Expect = 2.2
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +3
Query: 84 CKIAIGV*NICFDMPVAEEF----QASWADEVEIDQGVLPPPSEVVENGLKIVTEY 239
C++ IG + F+ ++ E+ A + D ++ LPP EVVEN +K++ +Y
Sbjct: 134 CRVRIGNRDREFEQAISNEYLTALHAQFIDAADVKLSGLPPKEEVVENFIKLLAQY 189
>UniRef50_Q21275 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 493
Score = 35.1 bits (77), Expect = 2.2
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 156 ADEVEIDQGVLPPPSEVVE-NGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKT 332
AD I +GV P E+ + NGL V E Y+ND +K +T + +V S K K
Sbjct: 321 ADASIILKGVHPKAPEIFQSNGLDSVIEKYYNNDFEKSAQQKTSSSKNKVAEPSFKKSKR 380
Query: 333 WSKFGDSASD 362
+ D SD
Sbjct: 381 QEESDDEESD 390
>UniRef50_A5DCN2 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 242
Score = 35.1 bits (77), Expect = 2.2
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 687 EDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
ED T + IS L E + ++ + GPV +L L + TG G AYV
Sbjct: 2 EDTTVVSISGLPFDQTEEQVMEIARSVGPVEELRLIFDTMTGKSKGSAYV 51
>UniRef50_A7AMH0 Cluster: RNA recognition motif domain containing
protein; n=1; Babesia bovis|Rep: RNA recognition motif
domain containing protein - Babesia bovis
Length = 98
Score = 34.7 bits (76), Expect = 2.9
Identities = 14/57 (24%), Positives = 32/57 (56%)
Frame = +3
Query: 666 DQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
++ P++ I ++ + A E DI D +GFG + ++L ++ +G+ G+A++
Sbjct: 4 EEVPIKTIGGWVIIVTGVHPEAQEEDIRDAFEGFGQITSIHLNMDRRSGYAKGYAFI 60
>UniRef50_UPI00015B51E2 Cluster: PREDICTED: similar to GA17772-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA17772-PA - Nasonia vitripennis
Length = 169
Score = 34.3 bits (75), Expect = 3.8
Identities = 27/92 (29%), Positives = 43/92 (46%)
Frame = +3
Query: 168 EIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKTWSKFG 347
EI V S+ EN + +TE + KK+K V+ K EK+ K K+K S
Sbjct: 46 EIVLDVSSTSSDSDENYITPLTELREKELKKKLKEVKKKKKEKKKKRKKKHKKKESSDSS 105
Query: 348 DSASDKPGPNPATTNVAEDVFMQFITSKEESQ 443
DS SD + + ++ ED + K++S+
Sbjct: 106 DSESDNDSSSDSESDSDEDHKKKHKKKKKKSK 137
>UniRef50_A1DEZ9 Cluster: RNA binding domain protein; n=3;
Trichocomaceae|Rep: RNA binding domain protein -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 353
Score = 34.3 bits (75), Expect = 3.8
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +3
Query: 702 IRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
IR+ NL E+D++DL GPV L L +++ G G AYV
Sbjct: 111 IRVENLHYDITESDLEDLFTRIGPVSNLSLVYDRA-GRSEGVAYV 154
>UniRef50_UPI000065D989 Cluster: RNA-binding protein 28 (RNA-binding
motif protein 28).; n=1; Takifugu rubripes|Rep:
RNA-binding protein 28 (RNA-binding motif protein 28). -
Takifugu rubripes
Length = 682
Score = 33.9 bits (74), Expect = 5.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 708 ISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
+S L A ++++ GPV + ++ EK T C GF YV
Sbjct: 4 VSRLPTTASNERLEEIFSEIGPVKQCFVVNEKGTQKCRGFGYV 46
>UniRef50_Q0IHY7 Cluster: Ribonucleoprotein, PTB-binding 2; n=4;
Xenopus tropicalis|Rep: Ribonucleoprotein, PTB-binding 2
- Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 640
Score = 33.9 bits (74), Expect = 5.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 708 ISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
++NL F D +DLV+ +G + L + TGH G+ +V
Sbjct: 55 VTNLPPFFTLHDFEDLVRAYGNTERCLLVYSEFTGHSKGYGFV 97
>UniRef50_Q97IB5 Cluster: Predicted kinase related to hydroxyacetone
kinase, YLOV ortholog; n=6; Clostridium|Rep: Predicted
kinase related to hydroxyacetone kinase, YLOV ortholog -
Clostridium acetobutylicum
Length = 547
Score = 33.9 bits (74), Expect = 5.1
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +3
Query: 147 ASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEK 296
A+ A E+ D+ V+ P++ + G+ +TE++YD D +K K T IEK
Sbjct: 394 ANQASELS-DKNVVVIPTKTIPQGITCMTEFEYDGDVEKNKEKLTKAIEK 442
>UniRef50_Q16WH3 Cluster: RNA and export factor binding protein 2-I,
putative; n=7; Culicidae|Rep: RNA and export factor
binding protein 2-I, putative - Aedes aegypti
(Yellowfever mosquito)
Length = 273
Score = 33.9 bits (74), Expect = 5.1
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 687 EDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
E + + NL + E+++ D+ FGP+ K + + TG GF +V
Sbjct: 88 ESKAVLAVFNLNIYTTESELYDVFTKFGPLKKATIVLDAKTGRSRGFGFV 137
>UniRef50_A6QTN4 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 395
Score = 33.9 bits (74), Expect = 5.1
Identities = 20/66 (30%), Positives = 32/66 (48%)
Frame = +3
Query: 639 SSAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHC 818
S A R+ P + + +R+SNL E D++DL GP+ L L +++ G
Sbjct: 134 SRARRLDRYSPEPEQPQTGAKLRVSNLHYDLTEDDLEDLFTRIGPISALSLRYDRA-GRS 192
Query: 819 XGFAYV 836
G A+V
Sbjct: 193 EGIAFV 198
>UniRef50_Q7SYS2 Cluster: MKI67 FHA domain-interacting nucleolar
phosphoprotein-like; n=6; Tetrapoda|Rep: MKI67 FHA
domain-interacting nucleolar phosphoprotein-like -
Xenopus laevis (African clawed frog)
Length = 278
Score = 33.9 bits (74), Expect = 5.1
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 702 IRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
I I ++ +E + + FG V +L L++ K TG+ G+AYV
Sbjct: 43 IYIGHIPKSLIEPQLQEYFNQFGTVTRLRLSRSKKTGNSKGYAYV 87
>UniRef50_A6GEZ0 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 80
Score = 33.5 bits (73), Expect = 6.7
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +3
Query: 696 TAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
T + I L A +A + LV FG + ++ LA + G C GFAYV
Sbjct: 4 TTLYIGGLQAAADDASVRGLVGDFGAISEIRLAT-RDNGECRGFAYV 49
>UniRef50_A2Y2Y7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 254
Score = 33.5 bits (73), Expect = 6.7
Identities = 28/129 (21%), Positives = 46/129 (35%), Gaps = 8/129 (6%)
Frame = +3
Query: 474 KPPSSNVIFKCRTCQGDHLTLYCPFKHTQIXXXXXXXXXXXXXXXXXXSNKYIPPSSAGR 653
+ P + C +G+HL L CP+ + + +Y S R
Sbjct: 93 RDPDTEFCNICGDDKGNHLELMCPYNYLSPAAYFPCRARLALWGNYTTTLRY--KCSRHR 150
Query: 654 IPGRDQPPVRREDVTA--------IRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKST 809
+ +PP+ E +R++NL + +L FGP+ Y+ S
Sbjct: 151 EEEQSEPPMHDEANARRLGFLRCLVRVNNLPELCPPEQLVELFGRFGPLWMWYVPTRGSG 210
Query: 810 GHCXGFAYV 836
G C GF V
Sbjct: 211 GTCKGFGCV 219
>UniRef50_Q4QFQ1 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 577
Score = 33.5 bits (73), Expect = 6.7
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Frame = +3
Query: 123 MPVAEEFQASWADEVEIDQGV--LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEK 296
+P EE+ A A+EVE+ + V L ++ E +V + ++ ++ Y EK
Sbjct: 439 VPKIEEYMAQKAEEVELQKAVKNLERKVQIAEGQAAVVRQQSRRLQAQRASAIK-YANEK 497
Query: 297 RVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRP 449
+ S R T S G +AS +P A + MQ +E+ Q+P
Sbjct: 498 HLSRNSTTSRATASA-GATASSRP-----AAGSARGLLMQRRQQREQEQQP 542
>UniRef50_A0BPD6 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 659
Score = 33.5 bits (73), Expect = 6.7
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 171 IDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV 302
+DQ +LP +VV+ K+ E ++ N N+K + RT KIE+ +
Sbjct: 485 VDQQILPQFKQVVQQLSKLKREIEHLNQNEKHYLERTSKIEQEI 528
>UniRef50_Q76IQ0 Cluster: Putative uncharacterized protein SGN1;
n=1; Candida glabrata|Rep: Putative uncharacterized
protein SGN1 - Candida glabrata (Yeast) (Torulopsis
glabrata)
Length = 144
Score = 33.5 bits (73), Expect = 6.7
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 618 SNKYIPPSSAGRIPGRDQPPVRRE-DVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLA 794
S+ + S R+ + ++ E D +I I N+ +ID+ K G + ++ +
Sbjct: 18 SSNNVTTQSNSRLTREQKHALQLEADACSIYIGNISLDTTPEEIDEHFKSCGVIKRITML 77
Query: 795 KEKSTGHCXGFAYV 836
+K+TG G+AYV
Sbjct: 78 YDKNTGPSIGYAYV 91
>UniRef50_Q86U42 Cluster: Polyadenylate-binding protein 2
(Poly(A)-binding protein 2) (Poly(A)- binding protein
II) (PABII) (Polyadenylate-binding nuclear protein 1)
(Nuclear poly(A)-binding protein 1); n=58;
Coelomata|Rep: Polyadenylate-binding protein 2
(Poly(A)-binding protein 2) (Poly(A)- binding protein
II) (PABII) (Polyadenylate-binding nuclear protein 1)
(Nuclear poly(A)-binding protein 1) - Homo sapiens
(Human)
Length = 306
Score = 33.5 bits (73), Expect = 6.7
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +3
Query: 633 PPSSAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTG 812
PP +AG + + + D +I + N+ A +++ G G V+++ + +K +G
Sbjct: 152 PPGNAGPVIMSIEEKMEA-DARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSG 210
Query: 813 HCXGFAYV 836
H GFAY+
Sbjct: 211 HPKGFAYI 218
>UniRef50_Q6CEW9 Cluster: Multiple RNA-binding domain-containing
protein 1; n=1; Yarrowia lipolytica|Rep: Multiple
RNA-binding domain-containing protein 1 - Yarrowia
lipolytica (Candida lipolytica)
Length = 828
Score = 33.5 bits (73), Expect = 6.7
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +3
Query: 657 PGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
P D V + + NL A E D L +G + +++L TG C GFA+V
Sbjct: 288 PSEDPTIVSIRKTGRLFLRNLLYTAKEEDFRQLFSQYGELEEVHLPINTKTGQCKGFAHV 347
>UniRef50_UPI00006CF237 Cluster: hypothetical protein
TTHERM_00053780; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00053780 - Tetrahymena
thermophila SB210
Length = 281
Score = 33.1 bits (72), Expect = 8.9
Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 246 DNDNKKVKIVRTYKIEKRV--VSKSIAKRKTWSKFGDSASDKP 368
D N KI T K+EKR+ + K+ RK KFGD SD P
Sbjct: 39 DGANPNQKIRETVKVEKRIFPIKKAAIARKNMKKFGD-VSDVP 80
>UniRef50_Q4RJP2 Cluster: Chromosome 13 SCAF15035, whole genome
shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 13
SCAF15035, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 720
Score = 33.1 bits (72), Expect = 8.9
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 708 ISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
+S L A ++++ GPV + ++ EK T C GF YV
Sbjct: 4 VSRLPATASNERLEEIFSEIGPVKQCFVVNEKGTQKCRGFGYV 46
>UniRef50_Q5E219 Cluster: Putative uncharacterized protein; n=1;
Vibrio fischeri ES114|Rep: Putative uncharacterized
protein - Vibrio fischeri (strain ATCC 700601 / ES114)
Length = 116
Score = 33.1 bits (72), Expect = 8.9
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +3
Query: 636 PSSAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGH 815
P+ + D P + T + + NL A E+D+ +L FG V + L K+K TG
Sbjct: 51 PAQSNSNDSADTAPNSDQASTTLYVGNLPYRANESDVKELFAEFGDVFAVRLMKDKRTGK 110
Query: 816 CXG 824
G
Sbjct: 111 RRG 113
>UniRef50_Q10YS3 Cluster: Putative uncharacterized protein; n=1;
Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein - Trichodesmium erythraeum
(strain IMS101)
Length = 241
Score = 33.1 bits (72), Expect = 8.9
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +3
Query: 168 EIDQGVLPPPSEVV-ENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSIAKRKT-WSK 341
E Q P EV N KIV E K D +++KVKI+ IEK +++++I K+ WS
Sbjct: 12 EYSQLSKPSDCEVCGANNFKIVEEKK-DLESEKVKILIPSFIEKTILNENIVKQSVYWSP 70
Query: 342 FGDSASDKPG 371
A K G
Sbjct: 71 ISRFARFKDG 80
>UniRef50_A4RXT9 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 98
Score = 33.1 bits (72), Expect = 8.9
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 690 DVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
++ +++I N+ E D+ + + FG V +Y+ KE+ + GFA+V
Sbjct: 5 NLVSVKIDNVSYELREEDLREAFEKFGDVGDVYIPKERGSYRARGFAFV 53
>UniRef50_Q5KBW2 Cluster: Polyadenylate-binding protein, cytoplasmic
and nuclear (Poly(A)- binding protein); n=2;
Eukaryota|Rep: Polyadenylate-binding protein,
cytoplasmic and nuclear (Poly(A)- binding protein) -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 673
Score = 33.1 bits (72), Expect = 8.9
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +3
Query: 684 REDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
R T + I N+ +A+ +DLVK FGP + L++++ G GF +V
Sbjct: 223 RAQFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEK-GVSKGFGFV 272
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,905,263
Number of Sequences: 1657284
Number of extensions: 13689227
Number of successful extensions: 42302
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 40362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42244
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72963732758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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