Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_E07
(837 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1015 + 33512023-33512359,33513550-33514082 117 1e-26
02_05_1014 + 33510108-33510471,33510857-33511362 79 3e-15
11_06_0728 + 26717018-26717306,26717494-26717598,26717789-267178... 37 0.023
11_06_0490 - 24293218-24293373,24293454-24293521,24293845-242939... 37 0.023
11_08_0081 - 28216179-28216381,28216590-28216657,28217131-282172... 36 0.040
11_02_0073 - 8020401-8020512,8020594-8020679,8020761-8020921,802... 33 0.37
05_03_0403 - 13534954-13535462,13537895-13538050,13538545-13538644 33 0.37
10_01_0298 - 3094197-3094307,3095093-3095253,3095462-3095666,309... 32 0.49
04_04_0176 - 23329589-23331043 32 0.49
02_02_0284 - 8547126-8547187,8547306-8547395,8547810-8547861,854... 32 0.49
03_03_0117 - 14583102-14583186,14585202-14585336,14585440-145856... 32 0.65
12_02_0846 - 23623624-23623784,23624076-23624258,23624601-236246... 31 0.86
01_07_0248 + 42261373-42261609,42261733-42261905,42261986-422620... 30 2.6
12_01_0964 + 9685989-9686459 29 6.1
07_01_0182 + 1280479-1280754,1281232-1282089 29 6.1
04_04_1575 + 34548774-34549109,34549979-34550185 28 8.0
04_03_0872 + 20452534-20453271 28 8.0
01_07_0160 - 41563109-41563468,41563566-41563985,41564082-415642... 28 8.0
>02_05_1015 + 33512023-33512359,33513550-33514082
Length = 289
Score = 117 bits (281), Expect = 1e-26
Identities = 76/244 (31%), Positives = 117/244 (47%), Gaps = 16/244 (6%)
Frame = +3
Query: 153 WADEVEIDQG----VLPPP--SEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV---V 305
W + E D+G +LPP S ENG K V EY++D+ KVK+ RT+++ K +
Sbjct: 12 WGELEEDDEGDLDFLLPPRVVSGPDENGFKKVVEYRFDDKGNKVKVTRTFRVRKIARARL 71
Query: 306 SKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPS 485
SKS +R++W KFGD+ + G + E V + +++ P D L S
Sbjct: 72 SKSAIERRSWPKFGDAVQEDVGARLTMVSTEEIVLERPRAPGSKAEEPSASG-DPLASKS 130
Query: 486 SNVIFKCRTC--QGDHLTLYCPFK----HTQIXXXXXXXXXXXXXXXXXXSNKYIPPSS- 644
V+ CRTC +GDH T CP+K T+ Y+PPS
Sbjct: 131 GAVLMVCRTCGKKGDHWTSKCPYKDLAPQTEAFVDRPPTADGSGPPGGAVKGAYVPPSMR 190
Query: 645 AGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXG 824
+G + RR D ++R++NL E D+ +L + FGPV ++Y+A ++ TG G
Sbjct: 191 SGAVDRVGHDMRRRNDENSVRVTNLSEDTREPDLLELFRTFGPVSRVYVAVDQKTGASRG 250
Query: 825 FAYV 836
F +V
Sbjct: 251 FGFV 254
>02_05_1014 + 33510108-33510471,33510857-33511362
Length = 289
Score = 79.4 bits (187), Expect = 3e-15
Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 12/227 (5%)
Frame = +3
Query: 192 PPSEVV---ENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV---VSKSIAKRKTWSKFGDS 353
PP V+ ENG+K EY+ + + K V++ T ++ + V+K A+R+ W+KFGD+
Sbjct: 36 PPRVVIGPDENGIKKTVEYRLNEEGKAVRVTTTTRVREVARTRVTKRAAERRGWAKFGDA 95
Query: 354 ASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVIFKCRTCQGDHLT 533
A + T E++ ++ + +D + L ++ ++ + +G H T
Sbjct: 96 AHNDDAGARLTVVSPEEIVLE--RPSAPGSKSEDPLIPALDKGAALMVCRICNAKGKHWT 153
Query: 534 LYCP---FKHTQIXXXXXXXXXXXXXXXXXXSN---KYIPPSSAGRIPGRDQPPVRREDV 695
CP F Q+ + KY+PP R+ RR D
Sbjct: 154 SKCPNKDFAPLQLDALVDNNIPPNSGGDNGGGSRPGKYVPPKP------RESEMRRRNDE 207
Query: 696 TAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
++R++NL E D+ +L FGP+ + Y+A + TG GF ++
Sbjct: 208 NSVRVTNLSEDTREEDLRELFGSFGPLTRAYVALDHRTGESRGFGFL 254
>11_06_0728 +
26717018-26717306,26717494-26717598,26717789-26717870,
26717979-26718055,26719087-26719151,26719261-26719302,
26719385-26719444,26719583-26720203,26720315-26720450,
26720667-26720734,26720811-26720948
Length = 560
Score = 36.7 bits (81), Expect = 0.023
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +3
Query: 630 IPPSSAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKST 809
+ P SAG + G D+ I + L + EA + +L++ FGP+ L K++ T
Sbjct: 334 LTPGSAGGLEGPDR----------IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRET 383
Query: 810 GHCXGFAY 833
G+ G+A+
Sbjct: 384 GNSKGYAF 391
>11_06_0490 -
24293218-24293373,24293454-24293521,24293845-24293986,
24294079-24294699,24294791-24294871,24295002-24295072,
24296106-24296176,24296568-24296675,24296786-24297024,
24297493-24297657
Length = 573
Score = 36.7 bits (81), Expect = 0.023
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +3
Query: 630 IPPSSAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKST 809
+ P SAG + G D+ I + L + EA + +L++ FGP+ L K++ T
Sbjct: 339 LTPGSAGGLEGPDR----------IFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRET 388
Query: 810 GHCXGFAY 833
G+ G+A+
Sbjct: 389 GNSKGYAF 396
>11_08_0081 -
28216179-28216381,28216590-28216657,28217131-28217298,
28217370-28217436,28217509-28217576,28218256-28218420,
28218490-28218556,28218629-28218696,28219855-28219992,
28220189-28220353,28221227-28221304,28221380-28221532,
28222753-28222823,28223077-28223203,28223306-28223565,
28223679-28223842,28224287-28224450,28225873-28226159
Length = 826
Score = 35.9 bits (79), Expect = 0.040
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 708 ISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
+SNL D+ + FGPV +YL K+ +TG GFA+V
Sbjct: 401 VSNLPRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFV 443
>11_02_0073 -
8020401-8020512,8020594-8020679,8020761-8020921,
8021196-8021400,8021664-8021697,8022352-8022422,
8023363-8023542,8023625-8023765,8023859-8023975,
8024074-8024469
Length = 500
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 708 ISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
I L E D+ +L FG ++++ L K+K T GFA+V
Sbjct: 108 IGGLPRDTTEEDLRELCDSFGEIYEVRLMKDKETKENKGFAFV 150
>05_03_0403 - 13534954-13535462,13537895-13538050,13538545-13538644
Length = 254
Score = 32.7 bits (71), Expect = 0.37
Identities = 28/129 (21%), Positives = 46/129 (35%), Gaps = 8/129 (6%)
Frame = +3
Query: 474 KPPSSNVIFKCRTCQGDHLTLYCPFKHTQIXXXXXXXXXXXXXXXXXXSNKYIPPSSAGR 653
+ P + C +G+HL L CP+ + + +Y S R
Sbjct: 93 RDPDTEFCNICGDDKGNHLELMCPYNYLSPAAYFPCRARLALWGNYTTTLRY--KCSRHR 150
Query: 654 IPGRDQPPVRREDVTA--------IRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKST 809
+ +PP+ E +R++NL + +L FGP+ Y+ S
Sbjct: 151 EEEQSEPPMHDEANARRLGFLRCLVRVNNLSELCPPEQLVELFGRFGPLWMWYVPTRGSG 210
Query: 810 GHCXGFAYV 836
G C GF V
Sbjct: 211 GTCKGFGCV 219
>10_01_0298 -
3094197-3094307,3095093-3095253,3095462-3095666,
3096349-3096534,3096616-3096756,3096843-3096959,
3097046-3097456
Length = 443
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 708 ISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
I L E D+ +L + FG + ++ L K+K T GFA+V
Sbjct: 113 IGGLPRDTTEDDLHELCEAFGEISEVRLMKDKETKENKGFAFV 155
>04_04_0176 - 23329589-23331043
Length = 484
Score = 32.3 bits (70), Expect = 0.49
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 672 PPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGF 827
PP TA+ I L + +A+++ + G +H L+ +K TG GF
Sbjct: 116 PPRASPPTTAVFIGELPYWTTDAEVEGALAPHGALHGLHFFTDKLTGKSRGF 167
>02_02_0284 -
8547126-8547187,8547306-8547395,8547810-8547861,
8548209-8548284,8550513-8550632,8553334-8553423,
8553842-8554024,8554125-8554185,8554437-8554477,
8554563-8554727,8555699-8555776,8556137-8556282
Length = 387
Score = 32.3 bits (70), Expect = 0.49
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 648 GRIPGRDQPPVRREDVT-AIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXG 824
GR P R R+E + ++ + N+ D+ + FGPV +YL K+ TG G
Sbjct: 20 GRSPPRRGYGGRKEQGSGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPKDYYTGEPRG 79
Query: 825 FAYV 836
FA+V
Sbjct: 80 FAFV 83
>03_03_0117 -
14583102-14583186,14585202-14585336,14585440-14585604,
14586168-14586245,14586796-14586941
Length = 202
Score = 31.9 bits (69), Expect = 0.65
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +3
Query: 636 PSSAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGH 815
PS GR GRD R+ T++ + NL D+ FG V +YL ++ TG
Sbjct: 22 PSPRGRYGGRD-----RDLPTSLLVRNLRRDCRPDDLRRPFGKFGRVKDIYLPRDYYTGE 76
Query: 816 CXGFAYV 836
GF ++
Sbjct: 77 PRGFGFI 83
>12_02_0846 -
23623624-23623784,23624076-23624258,23624601-23624641,
23624746-23624910,23625808-23625885,23626024-23626169
Length = 257
Score = 31.5 bits (68), Expect = 0.86
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 648 GRIPGRDQPPVRREDVT-AIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXG 824
GR P R RRE + ++ + N+ D+ + FGPV +YL K+ +G G
Sbjct: 20 GRSPPRRGYGGRREQGSGSLLVRNIPLSCRGEDLRVPFERFGPVRDVYLPKDYYSGEPRG 79
Query: 825 FAYV 836
FA+V
Sbjct: 80 FAFV 83
>01_07_0248 +
42261373-42261609,42261733-42261905,42261986-42262058,
42262148-42262282,42262352-42262562,42262886-42263034,
42263169-42263267,42263821-42263989,42264176-42264308,
42264600-42264694,42264774-42264882,42265136-42265295,
42265433-42265594,42265814-42265985,42266254-42266402,
42266914-42266951,42267779-42267839,42267913-42268155,
42268233-42268315,42269521-42269609,42270449-42270495,
42270576-42270656,42270737-42270899,42271077-42271267,
42271691-42271762
Length = 1097
Score = 29.9 bits (64), Expect = 2.6
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 1/89 (1%)
Frame = +3
Query: 120 DMPVAEEFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKV-KIVRTYKIEK 296
D + E +A+WA Q VL P + LK D +V + + YKI +
Sbjct: 698 DQELLAEAEAAWAQREWTIQHVLFPSMRLF---LKPPKSMATDGTFVQVASLEKLYKIFE 754
Query: 297 RVVSKSIAKRKTWSKFGDSASDKPGPNPA 383
R + KS K T + F +S P NP+
Sbjct: 755 RSLQKSKRKANTPTNFLESLQTTPDQNPS 783
>12_01_0964 + 9685989-9686459
Length = 156
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -1
Query: 192 VEVHLGQSRPHQPRKPEILQQQACRNIYFIHQLLFCNL--SYEVIIDR 55
VE+ QS Q R +++QQQ C+ + I Q C S +VI+ +
Sbjct: 58 VEIPFFQSPVFQLRNCQVMQQQCCQQLRMIAQQSHCQAVSSVQVIVQQ 105
>07_01_0182 + 1280479-1280754,1281232-1282089
Length = 377
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 708 ISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
+ + A EA++ +G V + + ++K TGH GF +V
Sbjct: 24 VGGIPTSAQEAELRGHFGQYGAVRSVIVMRDKETGHGRGFGFV 66
>04_04_1575 + 34548774-34549109,34549979-34550185
Length = 180
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +3
Query: 120 DMPVAEEFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKI 290
D+PV +F A W + V+ +E E LKIV K D+D +++ YK+
Sbjct: 85 DLPVLVDFVADWCGPCRLIAPVVDWAAEEYEGRLKIV---KIDHD-ANPQLIEEYKV 137
>04_03_0872 + 20452534-20453271
Length = 245
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 434 FLTGDELHEDIFSYISSSRVRP 369
F+ GDELHED F + SS P
Sbjct: 31 FVAGDELHEDDFLFSSSPAAPP 52
>01_07_0160 -
41563109-41563468,41563566-41563985,41564082-41564263,
41564362-41564542,41565066-41565084,41565185-41565445,
41566140-41566253,41566264-41566331,41566890-41567018,
41567141-41567245,41567317-41567456,41567519-41567687,
41567824-41567900,41568133-41568187,41568660-41568705,
41568806-41568894,41568996-41569061,41569360-41569425,
41569817-41569906,41570009-41570026
Length = 884
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 765 FGPVHKLYLAKEKSTGHCXGFAYV 836
FGP+ + KE+S+G GF YV
Sbjct: 26 FGPLDDCVVMKERSSGRSRGFGYV 49
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,627,471
Number of Sequences: 37544
Number of extensions: 381242
Number of successful extensions: 1125
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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