Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_E07
(837 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118933-1|AAM50793.1| 269|Drosophila melanogaster LD24347p pro... 230 2e-60
AE014298-421|AAF45796.1| 269|Drosophila melanogaster CG8636-PA ... 230 2e-60
AE014297-2789|AAF55764.1| 273|Drosophila melanogaster CG10881-P... 200 1e-51
BT001728-1|AAN71483.1| 470|Drosophila melanogaster RE70333p pro... 30 3.4
AE014296-817|AAF47879.2| 470|Drosophila melanogaster CG1316-PA ... 30 3.4
L34934-1|AAA73522.1| 224|Drosophila melanogaster RNA binding pr... 29 6.0
BT003171-1|AAO24926.1| 443|Drosophila melanogaster SD07604p pro... 29 6.0
BT001477-1|AAN71232.1| 443|Drosophila melanogaster LD21345p pro... 29 6.0
AY075519-1|AAL68327.1| 224|Drosophila melanogaster RE69521p pro... 29 6.0
AY070631-1|AAL48102.1| 224|Drosophila melanogaster RE74211p pro... 29 6.0
AL023893-1|CAA19655.1| 485|Drosophila melanogaster EG:132E8.1 p... 29 6.0
AF116341-1|AAF00976.1| 224|Drosophila melanogaster poly(A)-bind... 29 6.0
AE014298-190|AAS65244.1| 443|Drosophila melanogaster CG3056-PB,... 29 6.0
AE014298-189|AAF45613.1| 485|Drosophila melanogaster CG3056-PA,... 29 6.0
AE013599-599|AAM68852.1| 224|Drosophila melanogaster CG2163-PB,... 29 6.0
AE013599-598|AAF59127.1| 224|Drosophila melanogaster CG2163-PA,... 29 6.0
L23404-1|AAA03548.1| 416|Drosophila melanogaster RNA binding pr... 29 7.9
AY069320-1|AAL39465.1| 416|Drosophila melanogaster LD03714p pro... 29 7.9
AE014298-2376|AAF48596.1| 416|Drosophila melanogaster CG9998-PA... 29 7.9
>AY118933-1|AAM50793.1| 269|Drosophila melanogaster LD24347p
protein.
Length = 269
Score = 230 bits (563), Expect = 2e-60
Identities = 121/245 (49%), Positives = 158/245 (64%), Gaps = 7/245 (2%)
Frame = +3
Query: 123 MPVAEEFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV 302
MP E ++SWADEVE+D G LPP +E VENG K VTEYKY+ D+KK K+VRTYKI K+V
Sbjct: 1 MPGVETIKSSWADEVELDYGGLPPTTETVENGQKYVTEYKYNKDDKKTKVVRTYKISKQV 60
Query: 303 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPP 482
V K++AKR+TW+KFGDS +DKPGPN TT V+E++ MQF+ SKE+ ++ +D LD P
Sbjct: 61 VPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKED-EKANDPLLD----P 115
Query: 483 SSNVIFKCRTCQGDHLTLYCPFKHTQI---XXXXXXXXXXXXXXXXXXSNKYIPP----S 641
+ N I KCR C G+H ++ CP+K T + S KY+PP S
Sbjct: 116 TKN-IAKCRICNGEHWSVNCPYKGTAMDTNMMEKKASAAAAAAVDAPKSGKYVPPFLKDS 174
Query: 642 SAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCX 821
G + R R+D AIRISNL EAD+++LVK GP K+YLA++K+TG C
Sbjct: 175 QKGALGMRG-----RDDTAAIRISNLSESMTEADLEELVKKIGPQSKMYLARDKNTGLCK 229
Query: 822 GFAYV 836
GFAYV
Sbjct: 230 GFAYV 234
>AE014298-421|AAF45796.1| 269|Drosophila melanogaster CG8636-PA
protein.
Length = 269
Score = 230 bits (563), Expect = 2e-60
Identities = 121/245 (49%), Positives = 158/245 (64%), Gaps = 7/245 (2%)
Frame = +3
Query: 123 MPVAEEFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRV 302
MP E ++SWADEVE+D G LPP +E VENG K VTEYKY+ D+KK K+VRTYKI K+V
Sbjct: 1 MPGVETIKSSWADEVELDYGGLPPTTETVENGQKYVTEYKYNKDDKKTKVVRTYKISKQV 60
Query: 303 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPP 482
V K++AKR+TW+KFGDS +DKPGPN TT V+E++ MQF+ SKE+ ++ +D LD P
Sbjct: 61 VPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKED-EKANDPLLD----P 115
Query: 483 SSNVIFKCRTCQGDHLTLYCPFKHTQI---XXXXXXXXXXXXXXXXXXSNKYIPP----S 641
+ N I KCR C G+H ++ CP+K T + S KY+PP S
Sbjct: 116 TKN-IAKCRICNGEHWSVNCPYKGTAMDTNMMEKKASAAAAAAVDAPKSGKYVPPFLKDS 174
Query: 642 SAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCX 821
G + R R+D AIRISNL EAD+++LVK GP K+YLA++K+TG C
Sbjct: 175 QKGALGMRG-----RDDTAAIRISNLSESMTEADLEELVKKIGPQSKMYLARDKNTGLCK 229
Query: 822 GFAYV 836
GFAYV
Sbjct: 230 GFAYV 234
>AE014297-2789|AAF55764.1| 273|Drosophila melanogaster CG10881-PA
protein.
Length = 273
Score = 200 bits (489), Expect = 1e-51
Identities = 110/242 (45%), Positives = 150/242 (61%), Gaps = 10/242 (4%)
Frame = +3
Query: 141 FQASWADEVEIDQ-GVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIEKRVVSKSI 317
F SWADEV+ D LPP +E ++ K VTEYK+++D KKVK+VRT+KIEK++V K++
Sbjct: 4 FVTSWADEVDADYVDGLPPSNEYIKGDFKYVTEYKFNDDGKKVKVVRTFKIEKQIVPKAV 63
Query: 318 AKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPPSSNVI 497
A+R+ W KFGDS SDKPGPN TT +E++FMQFI SK+ Q + +LD P N I
Sbjct: 64 ARRRNWVKFGDSRSDKPGPNSQTTMASEEIFMQFIGSKDFDQ-THETQLD----PGKN-I 117
Query: 498 FKCRTCQGDHLTLYCPFKHTQIXXXXXXXXXXXXXXXXXXSN-----KYIPP--SSAGRI 656
KCR C G+H ++ CP+K T + S+ KY+PP G I
Sbjct: 118 AKCRICNGEHWSVNCPYKGTSMDSKTVMETKANAAAAAAISDPSKTGKYVPPFMKDGGGI 177
Query: 657 PG-RDQPPVR-REDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFA 830
G ++ R R+D +A+RISNL E D+++LVK GP K+YLA+EK++G C GFA
Sbjct: 178 SGSKNWGRGRDRDDSSAVRISNLSESMTETDLEELVKKIGPHTKMYLAREKNSGLCKGFA 237
Query: 831 YV 836
YV
Sbjct: 238 YV 239
>BT001728-1|AAN71483.1| 470|Drosophila melanogaster RE70333p
protein.
Length = 470
Score = 30.3 bits (65), Expect = 3.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 729 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
A E DI + +G V + + KEK+ G+ GF YV
Sbjct: 133 ATEEDIREEFSQWGDVESVTIVKEKNNGNPKGFGYV 168
>AE014296-817|AAF47879.2| 470|Drosophila melanogaster CG1316-PA
protein.
Length = 470
Score = 30.3 bits (65), Expect = 3.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 729 AVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
A E DI + +G V + + KEK+ G+ GF YV
Sbjct: 133 ATEEDIREEFSQWGDVESVTIVKEKNNGNPKGFGYV 168
>L34934-1|AAA73522.1| 224|Drosophila melanogaster RNA binding
protein protein.
Length = 224
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +3
Query: 690 DVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
D ++ + N+ A +++ G G ++++ + K+ GH GFAY+
Sbjct: 94 DTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYI 142
>BT003171-1|AAO24926.1| 443|Drosophila melanogaster SD07604p
protein.
Length = 443
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +3
Query: 639 SSAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHC 818
+SAG+ Q V R T + I+ L + ++ +L G GP++ + ++ TG+
Sbjct: 76 NSAGQQQQMQQ--VDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYS 133
Query: 819 XGFAYV 836
G+ +V
Sbjct: 134 FGYGFV 139
>BT001477-1|AAN71232.1| 443|Drosophila melanogaster LD21345p
protein.
Length = 443
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +3
Query: 639 SSAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHC 818
+SAG+ Q V R T + I+ L + ++ +L G GP++ + ++ TG+
Sbjct: 76 NSAGQQQQMQQ--VDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYS 133
Query: 819 XGFAYV 836
G+ +V
Sbjct: 134 FGYGFV 139
>AY075519-1|AAL68327.1| 224|Drosophila melanogaster RE69521p
protein.
Length = 224
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +3
Query: 690 DVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
D ++ + N+ A +++ G G ++++ + K+ GH GFAY+
Sbjct: 94 DTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYI 142
>AY070631-1|AAL48102.1| 224|Drosophila melanogaster RE74211p
protein.
Length = 224
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +3
Query: 690 DVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
D ++ + N+ A +++ G G ++++ + K+ GH GFAY+
Sbjct: 94 DTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYI 142
>AL023893-1|CAA19655.1| 485|Drosophila melanogaster EG:132E8.1
protein.
Length = 485
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +3
Query: 639 SSAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHC 818
+SAG+ Q V R T + I+ L + ++ +L G GP++ + ++ TG+
Sbjct: 76 NSAGQQQQMQQ--VDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYS 133
Query: 819 XGFAYV 836
G+ +V
Sbjct: 134 FGYGFV 139
>AF116341-1|AAF00976.1| 224|Drosophila melanogaster poly(A)-binding
protein II protein.
Length = 224
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +3
Query: 690 DVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
D ++ + N+ A +++ G G ++++ + K+ GH GFAY+
Sbjct: 94 DTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYI 142
>AE014298-190|AAS65244.1| 443|Drosophila melanogaster CG3056-PB,
isoform B protein.
Length = 443
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +3
Query: 639 SSAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHC 818
+SAG+ Q V R T + I+ L + ++ +L G GP++ + ++ TG+
Sbjct: 76 NSAGQQQQMQQ--VDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYS 133
Query: 819 XGFAYV 836
G+ +V
Sbjct: 134 FGYGFV 139
>AE014298-189|AAF45613.1| 485|Drosophila melanogaster CG3056-PA,
isoform A protein.
Length = 485
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/66 (25%), Positives = 33/66 (50%)
Frame = +3
Query: 639 SSAGRIPGRDQPPVRREDVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHC 818
+SAG+ Q V R T + I+ L + ++ +L G GP++ + ++ TG+
Sbjct: 76 NSAGQQQQMQQ--VDRTSATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYS 133
Query: 819 XGFAYV 836
G+ +V
Sbjct: 134 FGYGFV 139
>AE013599-599|AAM68852.1| 224|Drosophila melanogaster CG2163-PB,
isoform B protein.
Length = 224
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +3
Query: 690 DVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
D ++ + N+ A +++ G G ++++ + K+ GH GFAY+
Sbjct: 94 DTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYI 142
>AE013599-598|AAF59127.1| 224|Drosophila melanogaster CG2163-PA,
isoform A protein.
Length = 224
Score = 29.5 bits (63), Expect = 6.0
Identities = 12/49 (24%), Positives = 26/49 (53%)
Frame = +3
Query: 690 DVTAIRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAYV 836
D ++ + N+ A +++ G G ++++ + K+ GH GFAY+
Sbjct: 94 DTRSVYVGNVDYGASAEELEAHFHGCGTINRVTILCNKADGHPKGFAYI 142
>L23404-1|AAA03548.1| 416|Drosophila melanogaster RNA binding
protein protein.
Length = 416
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 702 IRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAY 833
I I L N+ + + +L+ FG + L K+ +TG G+A+
Sbjct: 209 IFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAF 252
>AY069320-1|AAL39465.1| 416|Drosophila melanogaster LD03714p
protein.
Length = 416
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 702 IRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAY 833
I I L N+ + + +L+ FG + L K+ +TG G+A+
Sbjct: 209 IFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAF 252
>AE014298-2376|AAF48596.1| 416|Drosophila melanogaster CG9998-PA
protein.
Length = 416
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 702 IRISNLXNFAVEADIDDLVKGFGPVHKLYLAKEKSTGHCXGFAY 833
I I L N+ + + +L+ FG + L K+ +TG G+A+
Sbjct: 209 IFIGGLPNYLNDDQVKELLLSFGKLRAFNLVKDAATGLSKGYAF 252
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,726,755
Number of Sequences: 53049
Number of extensions: 668495
Number of successful extensions: 2517
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2510
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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