Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_E03
         (768 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    25   0.88 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    25   0.88 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   2.7  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   2.7  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   2.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   2.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.7  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   4.7  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.2  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -2

Query: 152 TYSK--MFILIVVGY*LLINQSMHHIHFLFFKRSQFLIENTYLPT 24
           TYS   +F+ +++ Y + +   + + H+L   R ++ + N YL T
Sbjct: 174 TYSLFIVFMTVILPYFINLLMELQYCHYLNILRVRYQLLNEYLET 218


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -2

Query: 152 TYSK--MFILIVVGY*LLINQSMHHIHFLFFKRSQFLIENTYLPT 24
           TYS   +F+ +++ Y + +   + + H+L   R ++ + N YL T
Sbjct: 174 TYSLFIVFMTVILPYFINLLMELQYCHYLNILRVRYQLLNEYLET 218


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 462 SPVAGGQDVSASPRGLHTQ 518
           SP +G QD   SP G H Q
Sbjct: 151 SPGSGHQDSRTSPSGQHLQ 169


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 462 SPVAGGQDVSASPRGLHTQ 518
           SP +G QD   SP G H Q
Sbjct: 151 SPGSGHQDSRTSPSGQHLQ 169


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = -1

Query: 462 WY---LLCVIILFLQFLLEFSQILLCSILAVE 376
           WY   +LC II FLQ ++ +S   +   L+++
Sbjct: 112 WYAGNVLCKIIRFLQAVVTYSSTYVLVALSID 143


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 462 SPVAGGQDVSASPRGLHTQ 518
           SP +G QD   SP G H Q
Sbjct: 151 SPGSGHQDSRTSPSGQHLQ 169


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 153 NL*QNVYINSSWLLITHKSIYASYSFPIL*K 61
           N    V I  + +L+TH  I   +S P+L K
Sbjct: 215 NFLSQVEIIHNEILVTHNEIQTIFSVPLLMK 245


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 153 NL*QNVYINSSWLLITHKSIYASYSFPIL*K 61
           N    V I  + +L+TH  I   +S P+L K
Sbjct: 40  NFLSQVEIIHNEILVTHNEIQTIFSVPLLMK 70


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 532 SLVYSCVCKPLGEAETSWPPA 470
           +++Y  + + LG A T+W P+
Sbjct: 558 AIIYPIIQEKLGVALTNWHPS 578


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +1

Query: 376  FNGEYAAKQYLTEFEQELEEKYYDTEKIPVP 468
            F+G     +Y+ E++Q       +TE++ VP
Sbjct: 920  FDGNSPITRYMIEYKQSKVSWEGNTERVLVP 950


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,582
Number of Sequences: 336
Number of extensions: 3962
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)