Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_E03
(768 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC004129-1|AAH04129.1| 621|Homo sapiens glycosylphosphatidylino... 124 5e-28
BC003171-1|AAH03171.1| 621|Homo sapiens glycosylphosphatidylino... 124 5e-28
AB006969-1|BAA24035.1| 621|Homo sapiens hGAA1 protein. 124 5e-28
AB002137-1|BAA82590.1| 621|Homo sapiens glycosylphosphatidylino... 124 5e-28
AB002135-1|BAA82588.1| 621|Homo sapiens glycosylphosphatidylino... 124 5e-28
BC006383-1|AAH06383.2| 561|Homo sapiens GPAA1 protein protein. 83 8e-16
BC019878-1|AAH19878.1| 314|Homo sapiens DNAH3 protein protein. 32 2.0
AF494040-1|AAM12861.1| 4116|Homo sapiens axonemal heavy chain dy... 32 2.0
BC070387-1|AAH70387.1| 315|Homo sapiens TRBV3-1 protein protein. 31 6.0
AF428131-1|AAL26569.1| 133|Homo sapiens T-cell receptor beta-ch... 30 7.9
>BC004129-1|AAH04129.1| 621|Homo sapiens
glycosylphosphatidylinositol anchor attachment protein 1
homolog (yeast) protein.
Length = 621
Score = 124 bits (298), Expect = 5e-28
Identities = 73/199 (36%), Positives = 104/199 (52%), Gaps = 4/199 (2%)
Frame = +1
Query: 184 MGLLSDPEYGSVKWVRILKKVHRPLCFLCYAVALVWFVMLANRDFNNETYFSENALLPGL 363
MGLLSDP R++ +++ PLC L Y + WF+ L TY SENA+ +
Sbjct: 1 MGLLSDPVRRRAL-ARLVLRLNAPLCVLSYVAGIAWFLALVFPPLTQRTYMSENAMGSTM 59
Query: 364 VTNEFNGEYAAKQYLTEFEQELEEKYYDTEKIPVPWLVAKMSQLHLEVYTHNYTLNYPL- 540
V +F G A+ + +F ++ + +PV WL M + LEVYT +++ P
Sbjct: 60 VEEQFAGGDRARAFARDFAAHRKK----SGALPVAWLERTMRSVGLEVYTQSFSRKLPFP 115
Query: 541 ---GQGQIYKGTNVYGILRAARTPSLEALVVSAPFRPLSSHQKSTAAGIALMLAFAEFAR 711
+ + GTNVYGILRA R S E+LV++ P + + + L+LA A R
Sbjct: 116 DETHERYMVSGTNVYGILRAPRAASTESLVLTVP----CGSDSTNSQAVGLLLALAAHFR 171
Query: 712 PQKYWAKDIIFLVTEHXQL 768
Q YWAKDI+FLVTEH L
Sbjct: 172 GQIYWAKDIVFLVTEHDLL 190
>BC003171-1|AAH03171.1| 621|Homo sapiens
glycosylphosphatidylinositol anchor attachment protein 1
homolog (yeast) protein.
Length = 621
Score = 124 bits (298), Expect = 5e-28
Identities = 73/199 (36%), Positives = 104/199 (52%), Gaps = 4/199 (2%)
Frame = +1
Query: 184 MGLLSDPEYGSVKWVRILKKVHRPLCFLCYAVALVWFVMLANRDFNNETYFSENALLPGL 363
MGLLSDP R++ +++ PLC L Y + WF+ L TY SENA+ +
Sbjct: 1 MGLLSDPVRRRAL-ARLVLRLNAPLCVLSYVAGIAWFLALVFPPLTQRTYMSENAMGSTM 59
Query: 364 VTNEFNGEYAAKQYLTEFEQELEEKYYDTEKIPVPWLVAKMSQLHLEVYTHNYTLNYPL- 540
V +F G A+ + +F ++ + +PV WL M + LEVYT +++ P
Sbjct: 60 VEEQFAGGDRARAFARDFAAHRKK----SGALPVAWLERTMRSVGLEVYTQSFSRKLPFP 115
Query: 541 ---GQGQIYKGTNVYGILRAARTPSLEALVVSAPFRPLSSHQKSTAAGIALMLAFAEFAR 711
+ + GTNVYGILRA R S E+LV++ P + + + L+LA A R
Sbjct: 116 DETHERYMVSGTNVYGILRAPRAASTESLVLTVP----CGSDSTNSQAVGLLLALAAHFR 171
Query: 712 PQKYWAKDIIFLVTEHXQL 768
Q YWAKDI+FLVTEH L
Sbjct: 172 GQIYWAKDIVFLVTEHDLL 190
>AB006969-1|BAA24035.1| 621|Homo sapiens hGAA1 protein.
Length = 621
Score = 124 bits (298), Expect = 5e-28
Identities = 73/199 (36%), Positives = 104/199 (52%), Gaps = 4/199 (2%)
Frame = +1
Query: 184 MGLLSDPEYGSVKWVRILKKVHRPLCFLCYAVALVWFVMLANRDFNNETYFSENALLPGL 363
MGLLSDP R++ +++ PLC L Y + WF+ L TY SENA+ +
Sbjct: 1 MGLLSDPVRRRAL-ARLVLRLNAPLCVLSYVAGIAWFLALVFPPLTQRTYMSENAMGSTM 59
Query: 364 VTNEFNGEYAAKQYLTEFEQELEEKYYDTEKIPVPWLVAKMSQLHLEVYTHNYTLNYPL- 540
V +F G A+ + +F ++ + +PV WL M + LEVYT +++ P
Sbjct: 60 VEEQFAGGDRARAFARDFAAHRKK----SGALPVAWLERTMRSVGLEVYTQSFSRKLPFP 115
Query: 541 ---GQGQIYKGTNVYGILRAARTPSLEALVVSAPFRPLSSHQKSTAAGIALMLAFAEFAR 711
+ + GTNVYGILRA R S E+LV++ P + + + L+LA A R
Sbjct: 116 DETHERYMVSGTNVYGILRAPRAASTESLVLTVP----CGSDSTNSQAVGLLLALAAHFR 171
Query: 712 PQKYWAKDIIFLVTEHXQL 768
Q YWAKDI+FLVTEH L
Sbjct: 172 GQIYWAKDIVFLVTEHDLL 190
>AB002137-1|BAA82590.1| 621|Homo sapiens
glycosylphosphatidylinositol anchor attachment 1 (GPAA1)
protein.
Length = 621
Score = 124 bits (298), Expect = 5e-28
Identities = 73/199 (36%), Positives = 104/199 (52%), Gaps = 4/199 (2%)
Frame = +1
Query: 184 MGLLSDPEYGSVKWVRILKKVHRPLCFLCYAVALVWFVMLANRDFNNETYFSENALLPGL 363
MGLLSDP R++ +++ PLC L Y + WF+ L TY SENA+ +
Sbjct: 1 MGLLSDPVRRRAL-ARLVLRLNAPLCVLSYVAGIAWFLALVFPPLTQRTYMSENAMGSTM 59
Query: 364 VTNEFNGEYAAKQYLTEFEQELEEKYYDTEKIPVPWLVAKMSQLHLEVYTHNYTLNYPL- 540
V +F G A+ + +F ++ + +PV WL M + LEVYT +++ P
Sbjct: 60 VEEQFAGGDRARAFARDFAAHRKK----SGALPVAWLERTMRSVGLEVYTQSFSRKLPFP 115
Query: 541 ---GQGQIYKGTNVYGILRAARTPSLEALVVSAPFRPLSSHQKSTAAGIALMLAFAEFAR 711
+ + GTNVYGILRA R S E+LV++ P + + + L+LA A R
Sbjct: 116 DETHERYMVSGTNVYGILRAPRAASTESLVLTVP----CGSDSTNSQAVGLLLALAAHFR 171
Query: 712 PQKYWAKDIIFLVTEHXQL 768
Q YWAKDI+FLVTEH L
Sbjct: 172 GQIYWAKDIVFLVTEHDLL 190
>AB002135-1|BAA82588.1| 621|Homo sapiens
glycosylphosphatidylinositol anchor attachment 1 (GPAA1)
protein.
Length = 621
Score = 124 bits (298), Expect = 5e-28
Identities = 73/199 (36%), Positives = 104/199 (52%), Gaps = 4/199 (2%)
Frame = +1
Query: 184 MGLLSDPEYGSVKWVRILKKVHRPLCFLCYAVALVWFVMLANRDFNNETYFSENALLPGL 363
MGLLSDP R++ +++ PLC L Y + WF+ L TY SENA+ +
Sbjct: 1 MGLLSDPVRRRAL-ARLVLRLNAPLCVLSYVAGIAWFLALVFPPLTQRTYMSENAMGSTM 59
Query: 364 VTNEFNGEYAAKQYLTEFEQELEEKYYDTEKIPVPWLVAKMSQLHLEVYTHNYTLNYPL- 540
V +F G A+ + +F ++ + +PV WL M + LEVYT +++ P
Sbjct: 60 VEEQFAGGDRARAFARDFAAHRKK----SGALPVAWLERTMRSVGLEVYTQSFSRKLPFP 115
Query: 541 ---GQGQIYKGTNVYGILRAARTPSLEALVVSAPFRPLSSHQKSTAAGIALMLAFAEFAR 711
+ + GTNVYGILRA R S E+LV++ P + + + L+LA A R
Sbjct: 116 DETHERYMVSGTNVYGILRAPRAASTESLVLTVP----CGSDSTNSQAVGLLLALAAHFR 171
Query: 712 PQKYWAKDIIFLVTEHXQL 768
Q YWAKDI+FLVTEH L
Sbjct: 172 GQIYWAKDIVFLVTEHDLL 190
>BC006383-1|AAH06383.2| 561|Homo sapiens GPAA1 protein protein.
Length = 561
Score = 83.4 bits (197), Expect = 8e-16
Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Frame = +1
Query: 457 IPVPWLVAKMSQLHLEVYTHNYTLNYPLG----QGQIYKGTNVYGILRAARTPSLEALVV 624
+PV WL M + LEVYT +++ P + + GTNVYGILRA R S E+LV+
Sbjct: 27 LPVAWLERTMRSVGLEVYTQSFSRKLPFPDETHERYMVSGTNVYGILRAPRAASTESLVL 86
Query: 625 SAPFRPLSSHQKSTAAGIALMLAFAEFARPQKYWAKDIIFLVTEHXQL 768
+ P S++ ++ + L+LA A R Q YWAKDI+FLVTEH L
Sbjct: 87 TVPCGSDSTNSQA----VGLLLALAAHFRGQIYWAKDIVFLVTEHDLL 130
>BC019878-1|AAH19878.1| 314|Homo sapiens DNAH3 protein protein.
Length = 314
Score = 32.3 bits (70), Expect = 2.0
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +1
Query: 313 DFNNETYFSENA-LLPGLVTNEFNGEYAAKQYLTEFEQELEEKYYDTEKIPVPWLVAKMS 489
D N + +++ L G++++ F G K F + L + + PVPW + K+
Sbjct: 62 DVNLAKFLAQDVPLFQGIISDLFPGVVLPKPDYEVFLKVLNDNIKKMKLQPVPWFIGKII 121
Query: 490 QLH-LEVYTHNYTL-NYPLGQGQIYKGTNVYGILRAA 594
Q++ + + H Y + P+G G+ T+ Y +L AA
Sbjct: 122 QIYEMMLVRHGYMIVGDPMG-GK----TSAYKVLAAA 153
>AF494040-1|AAM12861.1| 4116|Homo sapiens axonemal heavy chain dynein
type 3 protein.
Length = 4116
Score = 32.3 bits (70), Expect = 2.0
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +1
Query: 313 DFNNETYFSENA-LLPGLVTNEFNGEYAAKQYLTEFEQELEEKYYDTEKIPVPWLVAKMS 489
D N + +++ L G++++ F G K F + L + + PVPW + K+
Sbjct: 1635 DVNLAKFLAQDVPLFQGIISDLFPGVVLPKPDYEVFLKVLNDNIKKMKLQPVPWFIGKII 1694
Query: 490 QLH-LEVYTHNYTL-NYPLGQGQIYKGTNVYGILRAA 594
Q++ + + H Y + P+G G+ T+ Y +L AA
Sbjct: 1695 QIYEMMLVRHGYMIVGDPMG-GK----TSAYKVLAAA 1726
>BC070387-1|AAH70387.1| 315|Homo sapiens TRBV3-1 protein protein.
Length = 315
Score = 30.7 bits (66), Expect = 6.0
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Frame = -3
Query: 571 HLCLCKSDLVLKGSLVYSCVCKPLGEAETSW-----PPATGL-VSSLCHNTFPPVPARIQ 410
HL L + L L S VY C P+G +S+ P T L V N FPP A +
Sbjct: 92 HLNLHINSLELGDSAVYFCASSPIGATSSSYNEQFFGPGTRLTVLEDLKNVFPPEVAVFE 151
Query: 409 -SNTALQHTRR*T 374
S + HT++ T
Sbjct: 152 PSEAEISHTQKAT 164
>AF428131-1|AAL26569.1| 133|Homo sapiens T-cell receptor beta-chain
protein.
Length = 133
Score = 30.3 bits (65), Expect = 7.9
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -3
Query: 538 KGSLVYSCVCKPLGEAETSWPPATGL-VSSLCHNTFPPVPARIQ-SNTALQHTRR*T 374
+ S VY C P + E + P T L V+ N FPP A + S + HT++ T
Sbjct: 52 RDSAVYFCASSPRADYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKAT 108
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,691,685
Number of Sequences: 237096
Number of extensions: 2403531
Number of successful extensions: 4703
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4683
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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