Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_E03
         (768 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039720-9|AAK68360.2|  676|Caenorhabditis elegans Hypothetical ...    62   6e-10
AF036693-5|AAK29787.1|  434|Caenorhabditis elegans Hypothetical ...    33   0.22 
Z93383-14|CAB07631.2|  279|Caenorhabditis elegans Hypothetical p...    29   2.8  
U50301-12|AAB37053.2|  486|Caenorhabditis elegans Hypothetical p...    29   3.6  
Z83221-9|CAB05710.1|  400|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z82095-8|CAB05029.1|  400|Caenorhabditis elegans Hypothetical pr...    29   4.8  

>AF039720-9|AAK68360.2|  676|Caenorhabditis elegans Hypothetical
           protein F33D11.9b protein.
          Length = 676

 Score = 61.7 bits (143), Expect = 6e-10
 Identities = 46/143 (32%), Positives = 69/143 (48%)
 Frame = +1

Query: 328 TYFSENALLPGLVTNEFNGEYAAKQYLTEFEQELEEKYYDTEKIPVPWLVAKMSQLHLEV 507
           T  SE++L+PGLVT +F+    A Q    F  +L +     E I   +     S L LE 
Sbjct: 67  TRISEHSLMPGLVTPKFDKSGIAIQLYRRFS-DLPKSKSQQELIHTIF-----SDLGLEC 120

Query: 508 YTHNYTLNYPLGQGQIYKGTNVYGILRAARTPSLEALVVSAPFRPLSSHQKSTAAGIALM 687
           +TH +        G    G NVYG +R  R    EA ++      L   +KS    ++ M
Sbjct: 121 FTHKWRSKVA---GNPMNGENVYGFIRGPRNDGAEAQMIVVQ---LGRSEKSRRM-MSRM 173

Query: 688 LAFAEFARPQKYWAKDIIFLVTE 756
           LAF ++A+ Q YWA+DI+ +  +
Sbjct: 174 LAFVDYAKDQVYWARDIVIVFVD 196


>AF036693-5|AAK29787.1|  434|Caenorhabditis elegans Hypothetical
           protein C49A9.5 protein.
          Length = 434

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +1

Query: 358 GLVTNEFNGEYAAKQYLTEFEQELEEKYYDTEKI 459
           G+  N+ NG+   K+Y+ E E+ LE K  DT K+
Sbjct: 323 GIFVNQENGKCFCKEYIGEIERVLEGKVNDTNKV 356


>Z93383-14|CAB07631.2|  279|Caenorhabditis elegans Hypothetical
           protein F54B8.12 protein.
          Length = 279

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 14/44 (31%), Positives = 27/44 (61%)
 Frame = -1

Query: 459 YLLCVIILFLQFLLEFSQILLCSILAVELVGNEPRKQSIFRKVS 328
           +++ + ILF QF+  F+  LL SIL  + +G +P    I+ +++
Sbjct: 7   FIIALSILFSQFVFYFNLYLLYSILYSKRIGFKPELLIIYCRIA 50


>U50301-12|AAB37053.2|  486|Caenorhabditis elegans Hypothetical
           protein F20D6.10 protein.
          Length = 486

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/48 (27%), Positives = 28/48 (58%)
 Frame = -1

Query: 453 LCVIILFLQFLLEFSQILLCSILAVELVGNEPRKQSIFRKVSLIIKVS 310
           L +++  LQ  L FS ++ CS+   ++  N  R++S F + S  ++++
Sbjct: 178 LLLVLAALQSYL-FSSVIRCSLYLADIEDNRRRRESAFERCSERVRIA 224


>Z83221-9|CAB05710.1|  400|Caenorhabditis elegans Hypothetical
           protein C49A1.2 protein.
          Length = 400

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +1

Query: 379 NGEYAAKQYLTEFEQELEEKYYDTEKIPVPW 471
           + ++  +  LTE  +EL+ K YD+  +P+ W
Sbjct: 170 DSKFLTENELTELSEELKTKRYDSYILPINW 200


>Z82095-8|CAB05029.1|  400|Caenorhabditis elegans Hypothetical
           protein C49A1.2 protein.
          Length = 400

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +1

Query: 379 NGEYAAKQYLTEFEQELEEKYYDTEKIPVPW 471
           + ++  +  LTE  +EL+ K YD+  +P+ W
Sbjct: 170 DSKFLTENELTELSEELKTKRYDSYILPINW 200


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,077,612
Number of Sequences: 27780
Number of extensions: 353690
Number of successful extensions: 952
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)