Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_E02
(780 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0248 - 23891684-23892064 34 0.15
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511... 34 0.15
12_02_0063 + 13098519-13099585,13099759-13099906 33 0.34
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 32 0.59
04_01_0615 - 8060085-8060972 31 1.0
07_03_0439 + 18212584-18213065,18214164-18215010 31 1.4
03_06_0147 - 31980352-31981629 31 1.4
09_06_0280 + 22010270-22011407,22011890-22013097 30 2.4
04_04_1325 + 32666302-32667633 30 2.4
01_06_0795 - 32051794-32053362,32053452-32053595,32054102-320549... 30 2.4
08_02_0819 - 21529913-21530064,21531016-21531082,21531284-215313... 29 3.1
05_03_0458 + 14280953-14281866,14281964-14282912 29 3.1
12_02_0589 + 20850249-20850491,20850583-20851839 29 4.1
04_04_1499 - 34006999-34007232,34007371-34007440,34007580-340076... 29 4.1
03_05_1129 - 30595580-30595771,30596119-30597162 29 4.1
11_01_0113 + 881806-881996,882831-882921,883140-883255,884489-88... 29 5.5
04_03_0362 + 14934236-14934541,14935549-14935647,14935736-149357... 29 5.5
02_02_0183 + 7576901-7576908,7577666-7578176 29 5.5
08_02_1508 + 27602104-27602265,27602398-27602449,27603357-276047... 28 7.2
08_02_0110 + 12650328-12650552,12650827-12651423,12651480-126518... 28 7.2
03_06_0648 + 35280492-35280645,35281742-35281820,35282491-352825... 28 7.2
03_02_1009 + 13189349-13189592,13189782-13189882,13191085-131910... 28 7.2
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 28 9.6
01_07_0344 - 42869465-42869502,42869597-42869771,42869923-428701... 28 9.6
01_01_0595 - 4430738-4430785,4430904-4432679 28 9.6
>04_04_0248 - 23891684-23892064
Length = 126
Score = 33.9 bits (74), Expect = 0.15
Identities = 35/120 (29%), Positives = 46/120 (38%), Gaps = 5/120 (4%)
Frame = +2
Query: 368 MKTSATFSGTAGTEKPPAISAAPDL-PTTESPAS----ACGLIRFRSAKTKK*QTDSAAQ 532
M T TA T PA+ AA + P + A A RFRSA + AA
Sbjct: 1 MATQNRSETTAATRIWPAVVAAARMRPAAATGARMQSVAAAATRFRSAAAAASRMRLAAA 60
Query: 533 PPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEPFSRSETPTALVTAKTPXTFP 712
R A +A+ L+P A T+ PA+ AP P + + P TA P
Sbjct: 61 AATRMRPAAAAAMPLLPSAA---TAARMWPPAAKAAPMHPAAATAAPLQSATASVVRMCP 117
>01_01_0668 -
5109476-5110112,5110196-5110439,5110519-5110917,
5111390-5111668,5111886-5112257,5112371-5112475,
5112832-5112909,5112990-5113199,5113287-5113406,
5113508-5113606,5113685-5113750,5113914-5114141,
5114216-5114521,5115324-5115381
Length = 1066
Score = 33.9 bits (74), Expect = 0.15
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +2
Query: 449 TESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAV---TLIPKIAVNITSVSRA 619
T P + R K QT +A +PP+R A + + T +P + N +SVS
Sbjct: 261 TSPPHKNSHIPRALPPKESSSQTGTAHKPPIRGSAPAETPLPQNTNMPAVPKNGSSVSHD 320
Query: 620 LPASTVAPSEPFSRS 664
P STVA +P + S
Sbjct: 321 RPPSTVAAPKPATSS 335
>12_02_0063 + 13098519-13099585,13099759-13099906
Length = 404
Score = 32.7 bits (71), Expect = 0.34
Identities = 22/79 (27%), Positives = 34/79 (43%)
Frame = +2
Query: 413 PPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIA 592
PP AA P +P +I + A +K A+PP + + + AV+ P
Sbjct: 183 PPPYPAAQAAPQAPAPPRQVPVITQQQAPPQKRPAAPVAEPPCATKKM-KGAVSAKPMAP 241
Query: 593 VNITSVSRALPASTVAPSE 649
+ + S A P VAPS+
Sbjct: 242 QSSVTASAAPPRCAVAPSQ 260
>12_01_0357 +
2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 31.9 bits (69), Expect = 0.59
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +2
Query: 353 TASSLMKTSATFSGT-AGTEKPPAI-SAAPDLPTTESPASACGLIRFRSAKTKK*QTDSA 526
T SS+M++SAT GT A + P A+ SA P P T +P + S T + TDSA
Sbjct: 152 TDSSMMQSSAT--GTQAAVQGPSAVASAVPMTPVTAAPTTV------PSTTTARAGTDSA 203
Query: 527 AQPPVRSPTLARSAVTLIPKIAVNITSVSRALPASTVAPSEP 652
T S V + P + V T+ S+ +AP P
Sbjct: 204 IAVASAGSTTV-STVAVAPSLPVAPTAASQ---GQALAPQTP 241
>04_01_0615 - 8060085-8060972
Length = 295
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/79 (25%), Positives = 34/79 (43%)
Frame = +2
Query: 416 PAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAV 595
P +A P LP++ A+ + S+ QP V +P+ S + +
Sbjct: 70 PLATAPPSLPSSLFAATVEETVMTASSPLPLPHPAEVLQPLVAAPSSQMSFASKAAAVLP 129
Query: 596 NITSVSRALPASTVAPSEP 652
+T+V ALP + PS+P
Sbjct: 130 CLTTVGPALPGAPSTPSQP 148
>07_03_0439 + 18212584-18213065,18214164-18215010
Length = 442
Score = 30.7 bits (66), Expect = 1.4
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = +2
Query: 290 LSAERGHSLSPQSPLLTVR-DCTASSLMKTSATFSGT---AGTEKPPAISAAPDLPTTES 457
L+A H + P SP ++ D + +A S T A + PP+ ++A L T
Sbjct: 15 LAATSWHCVHPPSPTVSTHWDAASHEARGAAAASSPTSPRAASTNPPSATSAEPLHTCVF 74
Query: 458 PASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLAR 562
S G R + Q A+P + +P LAR
Sbjct: 75 SGSVAGPSRQAALSYLTTQPSRMARPLLAAPHLAR 109
>03_06_0147 - 31980352-31981629
Length = 425
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 15 TLQCPLLSLPGLSSQYVFEVFISVSG 92
TL CP S PG S Y F+VF S +G
Sbjct: 174 TLVCPFESEPGSSGAYCFQVFTSGTG 199
>09_06_0280 + 22010270-22011407,22011890-22013097
Length = 781
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +1
Query: 499 NEEVANGFGCPAPGEVSNAGSFSRHAH----PEDCRKYYIC 609
N + AN + CP PGE + S +++ ++ R Y+C
Sbjct: 275 NNQAANNWSCPTPGEARRSACISNNSYCHNVTDNYRSGYVC 315
>04_04_1325 + 32666302-32667633
Length = 443
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/72 (31%), Positives = 27/72 (37%)
Frame = +1
Query: 517 GFGCPAPGEVSNAGSFSRHAHPEDCRKYYICLEGVAREYGCPIGTVFKIGDADGTGNCED 696
GF C A V G + A ED + E GC V K+G + C D
Sbjct: 341 GFACAALPRVFVDGRYLGGA--EDVHALHEAAELARMLEGCEAAPVRKLGYMEACAACGD 398
Query: 697 PEXVPGCEDYYG 732
VP CE YG
Sbjct: 399 VRFVP-CETCYG 409
>01_06_0795 -
32051794-32053362,32053452-32053595,32054102-32054965,
32055335-32055892
Length = 1044
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +3
Query: 39 LPGLSSQYVFEVFISVSGRPR--RSCGPRVLQMPRRLRFLPSPHLL 170
L L+S F+ ++GR C PR + PR L +L SPH+L
Sbjct: 326 LRNLTSNLTFQEAYDMTGRILVVTVCSPRKHEPPRCLNYLTSPHVL 371
>08_02_0819 -
21529913-21530064,21531016-21531082,21531284-21531373,
21531506-21531622,21532026-21532145,21532313-21533581
Length = 604
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +2
Query: 305 GHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDLPTTESPAS 466
G + +PQ+ +VR CT+ SL + SA GTA T + A SA +T S +S
Sbjct: 47 GGTPAPQAAASSVRRCTSPSLSRASAA-EGTASTNR--AQSAERRRSSTPSSSS 97
>05_03_0458 + 14280953-14281866,14281964-14282912
Length = 620
Score = 29.5 bits (63), Expect = 3.1
Identities = 33/130 (25%), Positives = 45/130 (34%), Gaps = 3/130 (2%)
Frame = +2
Query: 293 SAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPP--AISAAPDLPTTESPAS 466
+A S P SP + R+ S S S T T P S+ P++ P
Sbjct: 10 TASASSSYGPTSPPSSCRNAAPSPPSSNSTPTSSTTPTVPPSLTTTSSPSSSPSSPPPLP 69
Query: 467 ACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVTLIPKIAVNITSVSR-ALPASTVAP 643
T + PP SPT + SA +L P S S+ + P S P
Sbjct: 70 PLQPTPPPLPPTTLSCSSHPTPPPPPSPTTSPSASSLPPVPTPRSASSSKCSAPTSAQTP 129
Query: 644 SEPFSRSETP 673
+ S S P
Sbjct: 130 TRFLSSSSPP 139
>12_02_0589 + 20850249-20850491,20850583-20851839
Length = 499
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = -3
Query: 313 AVSSLRTQRCEGSRSSRSSIWNLWRRKRDRCRRFSVRLHRCRTSSI 176
A SSL T S S R ++ +WR+ R+ R+FS ++C +S+
Sbjct: 270 AYSSLLT--LYASLSDRGNLDRVWRKMRETFRKFSDTEYKCMLTSL 313
>04_04_1499 -
34006999-34007232,34007371-34007440,34007580-34007637,
34007940-34007979,34008183-34008259,34008366-34008582,
34008703-34009266
Length = 419
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 292 ECGERTQLEPPISTPHCSRLYGIF 363
+ GERT L PP H R++G+F
Sbjct: 144 DSGERTPLPPPSQQQHQDRIHGLF 167
>03_05_1129 - 30595580-30595771,30596119-30597162
Length = 411
Score = 29.1 bits (62), Expect = 4.1
Identities = 30/80 (37%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +2
Query: 455 SPASACGLIRFRSAKTKK*QTDSA-AQPPVRSPTLARSAVTLIPK-IAVNITSVSRALPA 628
SP+ A L R + T + + A A PP S AR VTL P+ +A T+ + A P
Sbjct: 175 SPSGAWSLRDVRGSPTGSIEVELASAAPPEASGVEARCVVTLHPEALATEFTARNAASP- 233
Query: 629 STVAPSEPFS---RSETPTA 679
S VA S S R TP A
Sbjct: 234 SPVALSAAVSTHLRVSTPDA 253
>11_01_0113 +
881806-881996,882831-882921,883140-883255,884489-885260
Length = 389
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 298 RTQRCEGSRSSRSSIWNLWRRKRDR 224
R RC G ++RS+ LWRR+R R
Sbjct: 20 RVSRCSGRPATRSAPSILWRRRRPR 44
>04_03_0362 +
14934236-14934541,14935549-14935647,14935736-14935798,
14935878-14935940,14937242-14937362,14937472-14937872,
14937968-14938141,14938252-14938570,14938659-14938735,
14938808-14938877,14938951-14939007,14939100-14939314,
14939436-14939561,14939649-14939944,14940032-14940203,
14940300-14940398,14940471-14940602,14940692-14940792,
14941391-14941580,14941819-14941842
Length = 1034
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = +1
Query: 397 CWNGEASRYQCSPGLAYDRESRVCMWADQVPECKNEEVANGFGCPAPGEVSNAGSFSRHA 576
CW G + RY+CSP VCM ++P + + P EV + G H
Sbjct: 77 CWRGLSRRYKCSPERTV---LSVCMLTGEMPRVQTSRLGKN-----PIEVDSDGGEDLHV 128
Query: 577 HPE 585
E
Sbjct: 129 DYE 131
>02_02_0183 + 7576901-7576908,7577666-7578176
Length = 172
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 322 GAQAVSSLRTQRCEGSRSSRSSIWNLWRRKRDRCRR 215
G V + +R EG S + W WRR+R RC R
Sbjct: 108 GGGGVGWMGMRRAEGGGSGSVARWRRWRRRR-RCGR 142
>08_02_1508 +
27602104-27602265,27602398-27602449,27603357-27604757,
27604833-27606140,27606594-27607435
Length = 1254
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
Frame = +2
Query: 542 RSPTLARSAVTLIPKIAVNITSVS------RALPASTVAPSEPFSRSETPTALVTAKTPX 703
R T S L+P + + S S + LP+ T+ +P R E+ T KTP
Sbjct: 251 RQTTSTESRTVLVPPPSAGMISTSFSSQREQPLPSETIRQDKPSPRKESNFFTTTEKTPS 310
Query: 704 T 706
T
Sbjct: 311 T 311
>08_02_0110 +
12650328-12650552,12650827-12651423,12651480-12651857,
12651997-12652218,12652407-12652483,12652553-12652631,
12652920-12653105
Length = 587
Score = 28.3 bits (60), Expect = 7.2
Identities = 32/128 (25%), Positives = 46/128 (35%), Gaps = 6/128 (4%)
Frame = +2
Query: 371 KTSATFSGTAGTEKPPAISAAPDL-PTTESPASACGLIRFRSAKTKK*QTDSAAQPPVRS 547
K T GT++PP I +P P SP + I S + +PPV S
Sbjct: 191 KNDIELGSTDGTDRPPRIPVSPSRPPVVASPRDS--PIASPSRPEPPVASPPGPEPPVAS 248
Query: 548 PTLARSAVTLIPKIAVNITSVSR---ALP--ASTVAPSEPFSRSETPTALVTAKTPXTFP 712
P + V P + + S +P P EP R++ P + T K
Sbjct: 249 PPVPEPQVASPPVLEPPVASPQTEKDPMPDQPEQSQPEEP-KRADVPVMVRTHKHKAKSA 307
Query: 713 DVRITMVT 736
+ MVT
Sbjct: 308 SKKHYMVT 315
>03_06_0648 +
35280492-35280645,35281742-35281820,35282491-35282593,
35282695-35282815,35283144-35283232,35283324-35283473,
35285842-35287161
Length = 671
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Frame = +2
Query: 227 VSLSTPQIPNXXXXXXXXXXXLSAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGT 406
+ S+P +PN AER +LS Q+P+++ + S M S G
Sbjct: 290 IGRSSPSVPNPPLGPR------GAERSSNLSSQTPVISSSGLSYGSGMHVGNANSRVNGN 343
Query: 407 EKPPAISAAP---DLPTTE 454
P + P D+P TE
Sbjct: 344 SVQPTVELLPSFKDVPNTE 362
>03_02_1009 +
13189349-13189592,13189782-13189882,13191085-13191090,
13191712-13191933,13192052-13192137,13192330-13192426,
13192817-13192909,13193031-13193186
Length = 334
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 290 LSAERGHSLSPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPDL 442
L RG SP P T+S SAT +GT G + PP + + PD+
Sbjct: 33 LGLSRGAGPSPPPP---PSSSTSSFPAAASATAAGTGG-DAPPIVGSCPDM 79
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/52 (26%), Positives = 19/52 (36%)
Frame = +1
Query: 529 PAPGEVSNAGSFSRHAHPEDCRKYYICLEGVAREYGCPIGTVFKIGDADGTG 684
PAPG + A H+HP C+ +C G +G G G
Sbjct: 9 PAPG-LLRAACLRSHSHPLQCKALELCFNVALNRLPASAGASPLLGHGHGVG 59
>01_07_0344 -
42869465-42869502,42869597-42869771,42869923-42870117,
42870678-42870788,42870899-42871111,42871551-42871658,
42871732-42871873,42872150-42873449,42874032-42874085,
42874491-42874923
Length = 922
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/46 (30%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -1
Query: 675 VGVSDLEN--GSDGATVLAGNALETDVIFTAIFGMSVTAERASVGD 544
+G +D +N GS + N +E+D + +A+ GM++++ RA G+
Sbjct: 274 LGATDKKNNVGSSSFNCSSPNIIESDDLVSALSGMNLSSSRAMNGN 319
>01_01_0595 - 4430738-4430785,4430904-4432679
Length = 607
Score = 27.9 bits (59), Expect = 9.6
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Frame = +2
Query: 413 PPAISAAPDLPTTE-----SPASACGLIRFRSAKTKK*QTDSAAQPPVRSPTLARSAVT- 574
PP A+P +PTT+ PA+A S + A QPP +P ++AV+
Sbjct: 113 PPDSGASPSVPTTKRVDTLPPAAADKAAISPSIPVPVRKRVHAPQPP-PAPAPEKAAVSP 171
Query: 575 LIPKIAVNITSVSRALPASTVAPSEPF 655
IP A S + A A+ +P PF
Sbjct: 172 SIPVPAKKRVSATAAAAATDASPRVPF 198
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,497,907
Number of Sequences: 37544
Number of extensions: 511568
Number of successful extensions: 2035
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2031
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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