Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_E02
(780 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 27 0.15
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 2.4
DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein. 23 2.4
AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family p... 23 3.2
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 23 4.2
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 4.2
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 9.7
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 9.7
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 21 9.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.7
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 27.5 bits (58), Expect = 0.15
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1
Query: 459 GLSVVGKSGAALIAGGFSVPAVPENVALVFIREDAVQS 346
GL G SGAALIA +PE +V I D +++
Sbjct: 301 GLLCGGSSGAALIAALKIAKDIPEEKRMVIILPDGIRN 338
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 736 RHHSNPHIRERXRGLRSYQC 677
R H NP +RE G +++C
Sbjct: 32 RLHDNPSLREGLAGASTFRC 51
>DQ435328-1|ABD92643.1| 143|Apis mellifera OBP11 protein.
Length = 143
Score = 23.4 bits (48), Expect = 2.4
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 352 YGIFPDENKCDVFWNC 399
YG FP++ K ++NC
Sbjct: 59 YGEFPEDEKLKCYFNC 74
>AF134820-1|AAD40235.1| 166|Apis mellifera putative Ets-family
protein protein.
Length = 166
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 650 PFSRSETPTALVTAKTPXT 706
PF S T +VTA TP T
Sbjct: 4 PFLSSSVSTVIVTALTPST 22
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 22.6 bits (46), Expect = 4.2
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
Frame = +1
Query: 157 HHISCDKYWKCDNGV-----AELKTCGNGL-AFDATDSKYLTE 267
H SCD+ W D G ++ C L FD T K L +
Sbjct: 134 HADSCDRLWVLDTGTIGIGNTTIQACPYTLNIFDLTSDKLLRQ 176
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.6 bits (46), Expect = 4.2
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Frame = -1
Query: 468 ADAGLSVVGKSGAALIAGGFSVPAV----PENVA 379
+ AG+ VVG + A+++AG S+ V PE++A
Sbjct: 9 SSAGVGVVGGTIASVVAGAASLTLVKAETPEHLA 42
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.4 bits (43), Expect = 9.7
Identities = 5/19 (26%), Positives = 12/19 (63%)
Frame = +1
Query: 172 DKYWKCDNGVAELKTCGNG 228
+ YW+C++ +++ G G
Sbjct: 63 ENYWQCNDKKTDIEETGRG 81
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.4 bits (43), Expect = 9.7
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +1
Query: 166 SCDKYWKCDNGVAEL 210
+CD+ W D GV ++
Sbjct: 119 ACDRLWGVDTGVDDI 133
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 21.4 bits (43), Expect = 9.7
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +1
Query: 265 ENCDYLHNVECGE 303
E CDY N+ GE
Sbjct: 40 EECDYYQNLNLGE 52
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 9.7
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 317 SPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPD 439
SP SP+L+VR + + +ATF T + PD
Sbjct: 1484 SPSSPVLSVRTQGQAPGIPPAATFLSPNSTTLVLRLHVWPD 1524
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 9.7
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 317 SPQSPLLTVRDCTASSLMKTSATFSGTAGTEKPPAISAAPD 439
SP SP+L+VR + + +ATF T + PD
Sbjct: 1480 SPSSPVLSVRTQGQAPGIPPAATFLSPNSTTLVLRLHVWPD 1520
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,557
Number of Sequences: 438
Number of extensions: 4855
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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