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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_D20
         (483 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U94586-1|AAB52726.1|   81|Homo sapiens NADH:ubiquinone oxidoredu...    79   8e-15
CR541716-1|CAG46517.1|   81|Homo sapiens NDUFA4 protein.               79   8e-15
CR407618-1|CAG28546.1|   81|Homo sapiens NDUFA4 protein.               79   8e-15
BC105295-1|AAI05296.1|   81|Homo sapiens NADH dehydrogenase (ubi...    79   8e-15
BC101796-1|AAI01797.1|   81|Homo sapiens NADH dehydrogenase (ubi...    79   8e-15
BC101794-1|AAI01795.1|   81|Homo sapiens NADH dehydrogenase (ubi...    79   8e-15
AF201077-1|AAF09253.1|   81|Homo sapiens NADH:ubiquinone oxidore...    79   8e-15
CR457176-1|CAG33457.1|   87|Homo sapiens LOC56901 protein.             74   2e-13
BC011910-1|AAH11910.1|   87|Homo sapiens NADH dehydrogenase (ubi...    74   2e-13
AF164796-1|AAF80760.1|   87|Homo sapiens NADH:ubiquinone oxidore...    74   2e-13
BC021173-1|AAH21173.1|   83|Homo sapiens chromosome 15 open read...    38   0.014
AF228422-1|AAK00708.1|   83|Homo sapiens normal mucosa of esopha...    38   0.014
AB026707-1|BAB61021.1|   83|Homo sapiens FOAP-11 protein protein.      38   0.014
BC035937-1|AAH35937.1|  542|Homo sapiens leucine rich repeat con...    30   3.7  
BC016439-1|AAH16439.1|  467|Homo sapiens LRRC56 protein protein.       30   3.7  
EF064728-1|ABK41911.1|  426|Homo sapiens Fc receptor-like B prot...    29   8.6  
DQ021957-1|AAY42534.1|  426|Homo sapiens Fc receptor related gen...    29   8.6  
AY786314-1|AAX11390.1|  426|Homo sapiens FREB-2 protein.               29   8.6  
AY670687-1|AAT77991.1|  268|Homo sapiens FCRL2c2 protein.              29   8.6  
AY670686-1|AAT77990.1|  275|Homo sapiens FCRL2c1 protein.              29   8.6  
AY670685-1|AAT77989.1|  311|Homo sapiens FCRL2b2 protein.              29   8.6  
AY670684-1|AAT77988.1|  318|Homo sapiens FCRL2b1 protein.              29   8.6  
AY670683-1|AAT77987.1|  426|Homo sapiens FCRL2a protein.               29   8.6  
AL359541-7|CAM20341.1|  275|Homo sapiens Fc receptor-like B prot...    29   8.6  
AL359541-6|CAH74155.2|  426|Homo sapiens Fc receptor-like B prot...    29   8.6  
AL359541-5|CAM20340.1|  311|Homo sapiens Fc receptor-like B prot...    29   8.6  
AL359541-4|CAM20343.1|  318|Homo sapiens Fc receptor-like B prot...    29   8.6  
AL359541-3|CAM20342.1|  268|Homo sapiens Fc receptor-like B prot...    29   8.6  

>U94586-1|AAB52726.1|   81|Homo sapiens NADH:ubiquinone
           oxidoreductase MLRQ subunit protein.
          Length = 81

 Score = 79.0 bits (186), Expect = 8e-15
 Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = +2

Query: 107 KXHKALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPI 283
           K H +LIPL+V +G G  GA  Y LRLAL NPDV W+ + NPEPW     N QYKFYS  
Sbjct: 10  KKHPSLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVN 68

Query: 284 RDYSKEESPAPKY 322
            DYSK +   P +
Sbjct: 69  VDYSKLKKERPDF 81


>CR541716-1|CAG46517.1|   81|Homo sapiens NDUFA4 protein.
          Length = 81

 Score = 79.0 bits (186), Expect = 8e-15
 Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = +2

Query: 107 KXHKALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPI 283
           K H +LIPL+V +G G  GA  Y LRLAL NPDV W+ + NPEPW     N QYKFYS  
Sbjct: 10  KKHPSLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVN 68

Query: 284 RDYSKEESPAPKY 322
            DYSK +   P +
Sbjct: 69  VDYSKLKKERPDF 81


>CR407618-1|CAG28546.1|   81|Homo sapiens NDUFA4 protein.
          Length = 81

 Score = 79.0 bits (186), Expect = 8e-15
 Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = +2

Query: 107 KXHKALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPI 283
           K H +LIPL+V +G G  GA  Y LRLAL NPDV W+ + NPEPW     N QYKFYS  
Sbjct: 10  KKHPSLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVN 68

Query: 284 RDYSKEESPAPKY 322
            DYSK +   P +
Sbjct: 69  VDYSKLKKERPDF 81


>BC105295-1|AAI05296.1|   81|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 alpha subcomplex, 4, 9kDa protein.
          Length = 81

 Score = 79.0 bits (186), Expect = 8e-15
 Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = +2

Query: 107 KXHKALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPI 283
           K H +LIPL+V +G G  GA  Y LRLAL NPDV W+ + NPEPW     N QYKFYS  
Sbjct: 10  KKHPSLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVN 68

Query: 284 RDYSKEESPAPKY 322
            DYSK +   P +
Sbjct: 69  VDYSKLKKERPDF 81


>BC101796-1|AAI01797.1|   81|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 alpha subcomplex, 4, 9kDa protein.
          Length = 81

 Score = 79.0 bits (186), Expect = 8e-15
 Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = +2

Query: 107 KXHKALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPI 283
           K H +LIPL+V +G G  GA  Y LRLAL NPDV W+ + NPEPW     N QYKFYS  
Sbjct: 10  KKHPSLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVN 68

Query: 284 RDYSKEESPAPKY 322
            DYSK +   P +
Sbjct: 69  VDYSKLKKERPDF 81


>BC101794-1|AAI01795.1|   81|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 alpha subcomplex, 4, 9kDa protein.
          Length = 81

 Score = 79.0 bits (186), Expect = 8e-15
 Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = +2

Query: 107 KXHKALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPI 283
           K H +LIPL+V +G G  GA  Y LRLAL NPDV W+ + NPEPW     N QYKFYS  
Sbjct: 10  KKHPSLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVN 68

Query: 284 RDYSKEESPAPKY 322
            DYSK +   P +
Sbjct: 69  VDYSKLKKERPDF 81


>AF201077-1|AAF09253.1|   81|Homo sapiens NADH:ubiquinone
           oxidoreductase MLRQ subunit protein.
          Length = 81

 Score = 79.0 bits (186), Expect = 8e-15
 Identities = 39/73 (53%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = +2

Query: 107 KXHKALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAY-RNKQYKFYSPI 283
           K H +LIPL+V +G G  GA  Y LRLAL NPDV W+ + NPEPW     N QYKFYS  
Sbjct: 10  KKHPSLIPLFVFIGTGATGATLYLLRLALFNPDVCWD-RNNPEPWNKLGPNDQYKFYSVN 68

Query: 284 RDYSKEESPAPKY 322
            DYSK +   P +
Sbjct: 69  VDYSKLKKERPDF 81


>CR457176-1|CAG33457.1|   87|Homo sapiens LOC56901 protein.
          Length = 87

 Score = 74.1 bits (174), Expect = 2e-13
 Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = +2

Query: 107 KXHKALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAYR-NKQYKFYSPI 283
           K H  +IP+   + +G G A  Y LRLALR+PDV W++K NPEPW     N QYKF +  
Sbjct: 15  KRHPGIIPMIGLICLGMGSAALYLLRLALRSPDVCWDRKNNPEPWNRLSPNDQYKFLAVS 74

Query: 284 RDYSKEESPAPKY 322
            DY K +   P +
Sbjct: 75  TDYKKLKKDRPDF 87


>BC011910-1|AAH11910.1|   87|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 alpha subcomplex, 4-like 2 protein.
          Length = 87

 Score = 74.1 bits (174), Expect = 2e-13
 Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = +2

Query: 107 KXHKALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAYR-NKQYKFYSPI 283
           K H  +IP+   + +G G A  Y LRLALR+PDV W++K NPEPW     N QYKF +  
Sbjct: 15  KRHPGIIPMIGLICLGMGSAALYLLRLALRSPDVCWDRKNNPEPWNRLSPNDQYKFLAVS 74

Query: 284 RDYSKEESPAPKY 322
            DY K +   P +
Sbjct: 75  TDYKKLKKDRPDF 87


>AF164796-1|AAF80760.1|   87|Homo sapiens NADH:ubiquinone
           oxidoreductase MLRQ subunit homolog protein.
          Length = 87

 Score = 74.1 bits (174), Expect = 2e-13
 Identities = 33/73 (45%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = +2

Query: 107 KXHKALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWEAYR-NKQYKFYSPI 283
           K H  +IP+   + +G G A  Y LRLALR+PDV W++K NPEPW     N QYKF +  
Sbjct: 15  KRHPGIIPMIGLICLGMGSAALYLLRLALRSPDVCWDRKNNPEPWNRLSPNDQYKFLAVS 74

Query: 284 RDYSKEESPAPKY 322
            DY K +   P +
Sbjct: 75  TDYKKLKKDRPDF 87


>BC021173-1|AAH21173.1|   83|Homo sapiens chromosome 15 open reading
           frame 48 protein.
          Length = 83

 Score = 38.3 bits (85), Expect = 0.014
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = +2

Query: 116 KALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWE 244
           K LIPL V + +  GGA  + +  +L   DV  ++K NPEPWE
Sbjct: 11  KELIPLVVFMTVAAGGASSFAV-YSLWKTDVILDRKKNPEPWE 52


>AF228422-1|AAK00708.1|   83|Homo sapiens normal mucosa of esophagus
           specific 1 protein.
          Length = 83

 Score = 38.3 bits (85), Expect = 0.014
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = +2

Query: 116 KALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWE 244
           K LIPL V + +  GGA  + +  +L   DV  ++K NPEPWE
Sbjct: 11  KELIPLVVFMTVAAGGASSFAV-YSLWKTDVILDRKKNPEPWE 52


>AB026707-1|BAB61021.1|   83|Homo sapiens FOAP-11 protein protein.
          Length = 83

 Score = 38.3 bits (85), Expect = 0.014
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = +2

Query: 116 KALIPLYVCVGIGCGGAVFYTLRLALRNPDVSWNKKTNPEPWE 244
           K LIPL V + +  GGA  + +  +L   DV  ++K NPEPWE
Sbjct: 11  KELIPLVVFMTVAAGGASSFAV-YSLWKTDVILDRKKNPEPWE 52


>BC035937-1|AAH35937.1|  542|Homo sapiens leucine rich repeat
           containing 56 protein.
          Length = 542

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -1

Query: 243 SHGSGLVFLFQDTSGLRKARRRV*NTAPPHPIPTH 139
           +HG+G V     T GLR+ R +     PP  +P H
Sbjct: 323 THGAGQVLCGNPTKGLRERRHQCQAREPPEQLPQH 357


>BC016439-1|AAH16439.1|  467|Homo sapiens LRRC56 protein protein.
          Length = 467

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -1

Query: 243 SHGSGLVFLFQDTSGLRKARRRV*NTAPPHPIPTH 139
           +HG+G V     T GLR+ R +     PP  +P H
Sbjct: 248 THGAGQVLCGNPTKGLRERRHQCQAREPPEQLPQH 282


>EF064728-1|ABK41911.1|  426|Homo sapiens Fc receptor-like B
           protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 322 VFGGRRFLLRVVSDGRIELVL-LVPVSLPWFRVGLLVPRYIRITQSQTQSIEHSSTTSYP 146
           +F G R  L+   DG   L+L L P+S  W+   LL+P + +  + QT  +    T   P
Sbjct: 34  IFKGERVTLKC--DGYHPLLLELQPISTLWYLGHLLLPSHKKSIEVQTPGVYRCQTRGAP 91


>DQ021957-1|AAY42534.1|  426|Homo sapiens Fc receptor related gene
           protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 322 VFGGRRFLLRVVSDGRIELVL-LVPVSLPWFRVGLLVPRYIRITQSQTQSIEHSSTTSYP 146
           +F G R  L+   DG   L+L L P+S  W+   LL+P + +  + QT  +    T   P
Sbjct: 34  IFKGERVTLKC--DGYHPLLLELQPISTLWYLGHLLLPSHKKSIEVQTPGVYRCQTRGAP 91


>AY786314-1|AAX11390.1|  426|Homo sapiens FREB-2 protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 322 VFGGRRFLLRVVSDGRIELVL-LVPVSLPWFRVGLLVPRYIRITQSQTQSIEHSSTTSYP 146
           +F G R  L+   DG   L+L L P+S  W+   LL+P + +  + QT  +    T   P
Sbjct: 34  IFKGERVTLKC--DGYHPLLLELQPISTLWYLGHLLLPSHKKSIEVQTPGVYRCQTRGAP 91


>AY670687-1|AAT77991.1|  268|Homo sapiens FCRL2c2 protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 322 VFGGRRFLLRVVSDGRIELVL-LVPVSLPWFRVGLLVPRYIRITQSQTQSIEHSSTTSYP 146
           +F G R  L+   DG   L+L L P+S  W+   LL+P + +  + QT  +    T   P
Sbjct: 27  IFKGERVTLKC--DGYHPLLLELQPISTLWYLGHLLLPSHKKSIEVQTPGVYRCQTRGAP 84


>AY670686-1|AAT77990.1|  275|Homo sapiens FCRL2c1 protein.
          Length = 275

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 322 VFGGRRFLLRVVSDGRIELVL-LVPVSLPWFRVGLLVPRYIRITQSQTQSIEHSSTTSYP 146
           +F G R  L+   DG   L+L L P+S  W+   LL+P + +  + QT  +    T   P
Sbjct: 34  IFKGERVTLKC--DGYHPLLLELQPISTLWYLGHLLLPSHKKSIEVQTPGVYRCQTRGAP 91


>AY670685-1|AAT77989.1|  311|Homo sapiens FCRL2b2 protein.
          Length = 311

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 322 VFGGRRFLLRVVSDGRIELVL-LVPVSLPWFRVGLLVPRYIRITQSQTQSIEHSSTTSYP 146
           +F G R  L+   DG   L+L L P+S  W+   LL+P + +  + QT  +    T   P
Sbjct: 27  IFKGERVTLKC--DGYHPLLLELQPISTLWYLGHLLLPSHKKSIEVQTPGVYRCQTRGAP 84


>AY670684-1|AAT77988.1|  318|Homo sapiens FCRL2b1 protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 322 VFGGRRFLLRVVSDGRIELVL-LVPVSLPWFRVGLLVPRYIRITQSQTQSIEHSSTTSYP 146
           +F G R  L+   DG   L+L L P+S  W+   LL+P + +  + QT  +    T   P
Sbjct: 34  IFKGERVTLKC--DGYHPLLLELQPISTLWYLGHLLLPSHKKSIEVQTPGVYRCQTRGAP 91


>AY670683-1|AAT77987.1|  426|Homo sapiens FCRL2a protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 322 VFGGRRFLLRVVSDGRIELVL-LVPVSLPWFRVGLLVPRYIRITQSQTQSIEHSSTTSYP 146
           +F G R  L+   DG   L+L L P+S  W+   LL+P + +  + QT  +    T   P
Sbjct: 34  IFKGERVTLKC--DGYHPLLLELQPISTLWYLGHLLLPSHKKSIEVQTPGVYRCQTRGAP 91


>AL359541-7|CAM20341.1|  275|Homo sapiens Fc receptor-like B
           protein.
          Length = 275

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 322 VFGGRRFLLRVVSDGRIELVL-LVPVSLPWFRVGLLVPRYIRITQSQTQSIEHSSTTSYP 146
           +F G R  L+   DG   L+L L P+S  W+   LL+P + +  + QT  +    T   P
Sbjct: 34  IFKGERVTLKC--DGYHPLLLELQPISTLWYLGHLLLPSHKKSIEVQTPGVYRCQTRGAP 91


>AL359541-6|CAH74155.2|  426|Homo sapiens Fc receptor-like B
           protein.
          Length = 426

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 322 VFGGRRFLLRVVSDGRIELVL-LVPVSLPWFRVGLLVPRYIRITQSQTQSIEHSSTTSYP 146
           +F G R  L+   DG   L+L L P+S  W+   LL+P + +  + QT  +    T   P
Sbjct: 34  IFKGERVTLKC--DGYHPLLLELQPISTLWYLGHLLLPSHKKSIEVQTPGVYRCQTRGAP 91


>AL359541-5|CAM20340.1|  311|Homo sapiens Fc receptor-like B
           protein.
          Length = 311

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 322 VFGGRRFLLRVVSDGRIELVL-LVPVSLPWFRVGLLVPRYIRITQSQTQSIEHSSTTSYP 146
           +F G R  L+   DG   L+L L P+S  W+   LL+P + +  + QT  +    T   P
Sbjct: 27  IFKGERVTLKC--DGYHPLLLELQPISTLWYLGHLLLPSHKKSIEVQTPGVYRCQTRGAP 84


>AL359541-4|CAM20343.1|  318|Homo sapiens Fc receptor-like B
           protein.
          Length = 318

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 322 VFGGRRFLLRVVSDGRIELVL-LVPVSLPWFRVGLLVPRYIRITQSQTQSIEHSSTTSYP 146
           +F G R  L+   DG   L+L L P+S  W+   LL+P + +  + QT  +    T   P
Sbjct: 34  IFKGERVTLKC--DGYHPLLLELQPISTLWYLGHLLLPSHKKSIEVQTPGVYRCQTRGAP 91


>AL359541-3|CAM20342.1|  268|Homo sapiens Fc receptor-like B
           protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 322 VFGGRRFLLRVVSDGRIELVL-LVPVSLPWFRVGLLVPRYIRITQSQTQSIEHSSTTSYP 146
           +F G R  L+   DG   L+L L P+S  W+   LL+P + +  + QT  +    T   P
Sbjct: 27  IFKGERVTLKC--DGYHPLLLELQPISTLWYLGHLLLPSHKKSIEVQTPGVYRCQTRGAP 84


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,294,038
Number of Sequences: 237096
Number of extensions: 1296398
Number of successful extensions: 3364
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 3232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3351
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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