Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_D17
(474 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 103 2e-21
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 102 4e-21
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 101 1e-20
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 92 7e-18
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 58 7e-08
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 58 1e-07
UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1; ... 55 9e-07
UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba h... 52 9e-06
UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1; ... 44 0.002
UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeu... 38 0.15
UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.35
UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5; Archae... 35 0.80
UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15; Therm... 33 2.4
UniRef50_A6FTA6 Cluster: Transcriptional regulator, MarR family ... 33 3.2
UniRef50_A6RQI4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.2
UniRef50_Q09347 Cluster: Uncharacterized protein T05H10.3 precur... 33 3.2
UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1; ... 32 5.6
UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN full-... 32 7.4
UniRef50_A5NWG8 Cluster: Putative uncharacterized protein; n=1; ... 32 7.4
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 103 bits (248), Expect = 2e-21
Identities = 50/82 (60%), Positives = 60/82 (73%), Gaps = 3/82 (3%)
Frame = +2
Query: 134 QKVQGKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVA 304
Q +GK +L + RRRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A
Sbjct: 25 QYKKGKDSLYAQGRRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLA 84
Query: 305 LKRCKHFELGGDKKRKGQMIQF 370
+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 85 IKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 102 bits (245), Expect = 4e-21
Identities = 49/82 (59%), Positives = 60/82 (73%), Gaps = 3/82 (3%)
Frame = +2
Query: 134 QKVQGKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVA 304
Q +GK +L + +RRYDRKQ GYGGQ+KPIF IVLRLEC + C+ + +A
Sbjct: 25 QYKKGKDSLYAQGKRRYDRKQSGYGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLA 84
Query: 305 LKRCKHFELGGDKKRKGQMIQF 370
+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 85 IKRCKHFELGGDKKRKGQVIQF 106
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 101 bits (241), Expect = 1e-20
Identities = 44/82 (53%), Positives = 56/82 (68%)
Frame = +2
Query: 125 ITVQKVQGKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVA 304
+T K + + RRRYDRKQ G+GGQ+KPIF IVLR+EC +CK + Q+
Sbjct: 24 VTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKKAKTTKKIVLRMECTECKHKKQLP 83
Query: 305 LKRCKHFELGGDKKRKGQMIQF 370
+KRCKHFELGG KK +GQ+IQF
Sbjct: 84 IKRCKHFELGGQKKSRGQVIQF 105
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 91.9 bits (218), Expect = 7e-18
Identities = 43/75 (57%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Frame = +2
Query: 134 QKVQGKGTLP-RXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALK 310
Q +GK +L + +RRYDRKQ GYGGQ+KP+F IVLRL+C CK SQ +K
Sbjct: 73 QYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIK 132
Query: 311 RCKHFELGGDKKRKG 355
RCKHFE+GGDKK KG
Sbjct: 133 RCKHFEIGGDKKGKG 147
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 58.4 bits (135), Expect = 7e-08
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +2
Query: 146 GKGTL-PRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKH 322
GK +L + +RRYDRKQQGYGGQ+KP+F ++L C CK +LKR K
Sbjct: 29 GKASLNAQGKRRYDRKQQGYGGQTKPVFRKQVKNTKKPSIKLSCEICKKEFIKSLKRTKR 88
Query: 323 FEL 331
F++
Sbjct: 89 FQI 91
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 57.6 bits (133), Expect = 1e-07
Identities = 27/61 (44%), Positives = 34/61 (55%)
Frame = +2
Query: 170 RRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKR 349
RRRYDRKQ+G+GG+ KPI I LR C CK + L R + FE +KK+
Sbjct: 38 RRRYDRKQKGFGGRVKPILRRSKKTSKKISLRFTCQSCKKATMYCLGRLRKFEWTVEKKK 97
Query: 350 K 352
K
Sbjct: 98 K 98
>UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 89
Score = 54.8 bits (126), Expect = 9e-07
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2
Query: 254 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 355
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 52 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 85
>UniRef50_O15576 Cluster: Ribosomal protein L44; n=1; Entamoeba
histolytica|Rep: Ribosomal protein L44 - Entamoeba
histolytica
Length = 80
Score = 51.6 bits (118), Expect = 9e-06
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 134 QKVQGKGTLP-RXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALK 310
Q +GK +L + +RRYDRKQQG+GGQ+KP+F + ++EC CK+ +
Sbjct: 9 QYKKGKDSLHVQGKRRYDRKQQGFGGQTKPVFKKKAKQQRRL-FKIECTKCKIAQSLRES 67
Query: 311 RC 316
C
Sbjct: 68 TC 69
>UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 147
Score = 43.6 bits (98), Expect = 0.002
Identities = 29/61 (47%), Positives = 34/61 (55%)
Frame = +3
Query: 162 PGXEDVMIVNSRVTVVSPNPSSKRRQKPLRKLCSVLSVQIAR*DHRLH*RDASTLSSVVT 341
P D ++ VTVV P+ SS RR +P R+L SV S AR DAST SSVVT
Sbjct: 42 PKESDDTTESNPVTVVRPSLSSTRRLRPPRRLSSVSSALSARPSTNSPSSDASTSSSVVT 101
Query: 342 R 344
R
Sbjct: 102 R 102
>UniRef50_A0RZ36 Cluster: Ribosomal protein L44E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L44E - Cenarchaeum
symbiosum
Length = 93
Score = 37.5 bits (83), Expect = 0.15
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +2
Query: 113 STQGITVQKVQGKGTLPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVR 292
+TQ +++ K + RR+ ++GYGGQ P + L C DCK +
Sbjct: 18 TTQKVSIYKAGKRRASAIGERRHAEDKKGYGGQKFPKLAKPAKVTKKVTRLLTCPDCKKK 77
Query: 293 SQVALKRCKHFE 328
R K FE
Sbjct: 78 FNTYGLRVKKFE 89
>UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 76
Score = 36.3 bits (80), Expect = 0.35
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 302 ALKRCKHFELGGDKKRKG 355
+++RCKHFE+GGDKK KG
Sbjct: 55 SVQRCKHFEIGGDKKGKG 72
>UniRef50_Q9HIX1 Cluster: 50S ribosomal protein L44E; n=5;
Archaea|Rep: 50S ribosomal protein L44E - Thermoplasma
acidophilum
Length = 93
Score = 35.1 bits (77), Expect = 0.80
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = +2
Query: 158 LPRXRRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFEL 331
L +RR+ R GYGG +P F I LRL C +C R K FE+
Sbjct: 33 LKAGQRRFRRVTSGYGGFPRPKFEGREKPTKRIALRLVCDECHKAITPPGIRAKKFEI 90
>UniRef50_Q9YF00 Cluster: 50S ribosomal protein L44E; n=15;
Thermoprotei|Rep: 50S ribosomal protein L44E - Aeropyrum
pernix
Length = 95
Score = 33.5 bits (73), Expect = 2.4
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = +2
Query: 173 RRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFEL 331
RRY RKQ+GYG Q +P VL + C C + R K EL
Sbjct: 38 RRYRRKQEGYGSQRRPEQKRFAKVTKKQVLVITCTVCGRKRPFLGIRLKRLEL 90
>UniRef50_A6FTA6 Cluster: Transcriptional regulator, MarR family
protein; n=1; Roseobacter sp. AzwK-3b|Rep:
Transcriptional regulator, MarR family protein -
Roseobacter sp. AzwK-3b
Length = 183
Score = 33.1 bits (72), Expect = 3.2
Identities = 17/62 (27%), Positives = 34/62 (54%)
Frame = +2
Query: 20 LTFVDIVPNELKNGERTKTAQDVLQKM*MPQSTQGITVQKVQGKGTLPRXRRRYDRKQQG 199
LT V + ++ + + T ++ Q+M + Q+T + ++K++ KG L R + DR+Q
Sbjct: 56 LTAVQLRVLQIVSEKGYATPTELSQRMGVTQATISVLIKKLESKGLLTRQQSEQDRRQTR 115
Query: 200 YG 205
G
Sbjct: 116 LG 117
>UniRef50_A6RQI4 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 226
Score = 33.1 bits (72), Expect = 3.2
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 129 QYKKSKXKARCPGXEDVMIVNSRVTVVSPNPSSKR 233
Q+ S + PG ED+ I N V V+ P P +KR
Sbjct: 84 QWPASAKEPLLPGDEDIQIDNGNVEVIDPQPKTKR 118
>UniRef50_Q09347 Cluster: Uncharacterized protein T05H10.3
precursor; n=2; Caenorhabditis|Rep: Uncharacterized
protein T05H10.3 precursor - Caenorhabditis elegans
Length = 158
Score = 33.1 bits (72), Expect = 3.2
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 133 YCDTLCTLWHLHFLQYVLRCFGTFTIFEFVRHDINKRQKEH 11
YCD +C H F+ Y+ + G F F+ + + KR EH
Sbjct: 74 YCDIVCPKSHTVFISYIDQ--GHRACFNFITYQVEKRNDEH 112
>UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 594
Score = 32.3 bits (70), Expect = 5.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 138 FCTVIPCVLCGIYIFCSTSC 79
F T+IPC C + +FCST C
Sbjct: 244 FLTLIPCKCCTVTMFCSTKC 263
>UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN
full-length enriched library, clone:1500005N04
product:SIMILAR TO MAMMALIAN INOSITOL HEXAKISPHOSPHATE
KINASE 2 homolog; n=2; Murinae|Rep: Adult male
cerebellum cDNA, RIKEN full-length enriched library,
clone:1500005N04 product:SIMILAR TO MAMMALIAN INOSITOL
HEXAKISPHOSPHATE KINASE 2 homolog - Mus musculus (Mouse)
Length = 262
Score = 31.9 bits (69), Expect = 7.4
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -1
Query: 366 WIICPFLFL---SPPSSKCLHLFNATCDLTLQSAHSRRS 259
WI+C FL L S PS +CLHL C L SA + S
Sbjct: 215 WIVCCFLLLCLPSLPSPQCLHLRAHPCSLQSGSALKQAS 253
>UniRef50_A5NWG8 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium sp. 4-46|Rep: Putative uncharacterized
protein - Methylobacterium sp. 4-46
Length = 113
Score = 31.9 bits (69), Expect = 7.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 41 PNELKNGERTKTAQDVLQKM*MPQSTQGITVQKVQGKGTLPRXRRR 178
PN + +G T T D ++ P T+ + + ++ G G PR RRR
Sbjct: 60 PNSVSSG-CTATQFDCTEQSPQPSQTRSLMITRLSGSGNRPRLRRR 104
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 378,472,015
Number of Sequences: 1657284
Number of extensions: 6307371
Number of successful extensions: 15674
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 15344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15666
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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