BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_D17
(474 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029953-1|ABM92827.1| 104|Drosophila melanogaster IP17351p pro... 110 8e-25
BT024261-1|ABC86323.1| 121|Drosophila melanogaster IP15820p pro... 110 8e-25
AE014134-1388|AAF52596.2| 104|Drosophila melanogaster CG7424-PA... 110 8e-25
BT010215-1|AAQ23533.1| 752|Drosophila melanogaster RH20440p pro... 29 2.4
AY052125-1|AAK93549.1| 503|Drosophila melanogaster SD07650p pro... 29 3.2
AE014297-2785|AAX52968.1| 512|Drosophila melanogaster CG33518-P... 29 4.2
AY118346-1|AAM48375.1| 285|Drosophila melanogaster LP05025p pro... 28 7.4
AE014298-2050|AAF48385.1| 285|Drosophila melanogaster CG5347-PA... 28 7.4
>BT029953-1|ABM92827.1| 104|Drosophila melanogaster IP17351p
protein.
Length = 104
Score = 110 bits (265), Expect = 8e-25
Identities = 49/67 (73%), Positives = 53/67 (79%)
Frame = +2
Query: 170 RRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKR 349
RRRYDRKQQG+GGQ+KPIF IVLR+EC +CK R Q LKRCKHFELGGDKKR
Sbjct: 38 RRRYDRKQQGFGGQTKPIFRKKAKTTKKIVLRMECTECKYRKQTPLKRCKHFELGGDKKR 97
Query: 350 KGQMIQF 370
KGQMIQF
Sbjct: 98 KGQMIQF 104
Score = 35.1 bits (77), Expect = 0.049
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 57 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPG 167
MVNVPKQRRT+ +QYKKSK + G
Sbjct: 1 MVNVPKQRRTFCKKCKVHKLHKVTQYKKSKERKGAQG 37
>BT024261-1|ABC86323.1| 121|Drosophila melanogaster IP15820p
protein.
Length = 121
Score = 110 bits (265), Expect = 8e-25
Identities = 49/67 (73%), Positives = 53/67 (79%)
Frame = +2
Query: 170 RRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKR 349
RRRYDRKQQG+GGQ+KPIF IVLR+EC +CK R Q LKRCKHFELGGDKKR
Sbjct: 55 RRRYDRKQQGFGGQTKPIFRKKAKTTKKIVLRMECTECKYRKQTPLKRCKHFELGGDKKR 114
Query: 350 KGQMIQF 370
KGQMIQF
Sbjct: 115 KGQMIQF 121
>AE014134-1388|AAF52596.2| 104|Drosophila melanogaster CG7424-PA
protein.
Length = 104
Score = 110 bits (265), Expect = 8e-25
Identities = 49/67 (73%), Positives = 53/67 (79%)
Frame = +2
Query: 170 RRRYDRKQQGYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKR 349
RRRYDRKQQG+GGQ+KPIF IVLR+EC +CK R Q LKRCKHFELGGDKKR
Sbjct: 38 RRRYDRKQQGFGGQTKPIFRKKAKTTKKIVLRMECTECKYRKQTPLKRCKHFELGGDKKR 97
Query: 350 KGQMIQF 370
KGQMIQF
Sbjct: 98 KGQMIQF 104
Score = 35.1 bits (77), Expect = 0.049
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 57 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKXKARCPG 167
MVNVPKQRRT+ +QYKKSK + G
Sbjct: 1 MVNVPKQRRTFCKKCKVHKLHKVTQYKKSKERKGAQG 37
>BT010215-1|AAQ23533.1| 752|Drosophila melanogaster RH20440p
protein.
Length = 752
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 100 HFLQYVLRCFGTFTIFEFVRHDINKRQKEH 11
+F+ Y R TIFEF++ D+NK Q EH
Sbjct: 344 YFVSYAQRVSEKDTIFEFIK-DLNKLQVEH 372
>AY052125-1|AAK93549.1| 503|Drosophila melanogaster SD07650p
protein.
Length = 503
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = -3
Query: 163 GQRAFXLDFLYCDTLCTLWHLHFLQYVLRCFGTFTIFEFVR 41
G R F +DF+YC ++ +L HL L L + T T F+F++
Sbjct: 271 GDRDFVVDFIYCCSMVSL-HLSRLAEDLIIYST-TEFDFIK 309
>AE014297-2785|AAX52968.1| 512|Drosophila melanogaster CG33518-PA
protein.
Length = 512
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Frame = -2
Query: 353 PFSSCHH-----RAQSACISSMQPVISPCNLH 273
P S+CH R +C SS+QP+++ C LH
Sbjct: 155 PQSTCHTALDTCREDPSCSSSLQPMLTHCELH 186
>AY118346-1|AAM48375.1| 285|Drosophila melanogaster LP05025p
protein.
Length = 285
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 327 SKCLHLFNATCDLTLQSAHSRRSTI 253
SKC H+F TC T + AH +T+
Sbjct: 181 SKCKHIFCLTCIRTWRQAHQFEATV 205
>AE014298-2050|AAF48385.1| 285|Drosophila melanogaster CG5347-PA
protein.
Length = 285
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 327 SKCLHLFNATCDLTLQSAHSRRSTI 253
SKC H+F TC T + AH +T+
Sbjct: 181 SKCKHIFCLTCIRTWRQAHQFEATV 205
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,520,516
Number of Sequences: 53049
Number of extensions: 310415
Number of successful extensions: 802
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -