Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_D15
         (409 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    25   0.29 
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    24   0.66 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   0.66 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   0.66 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   0.66 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   0.66 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    24   0.66 
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   1.5  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 25.0 bits (52), Expect = 0.29
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 7/38 (18%)
 Frame = -1

Query: 145 CWATFLKIW-------LLARSKFLIPNILF*YNYSSKC 53
           CWATF + W         + S F++P ++  + Y+S C
Sbjct: 190 CWATFQEPWGKRAYVTWYSISVFMVPLVVLIFTYTSIC 227


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 250 PGCWSTSSITATSNKIITKKYVVYSVLSK 336
           PGC+S     A  +K + KKY   S  +K
Sbjct: 228 PGCFSLFRGKALMDKSVMKKYTTRSTQAK 256


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 250 PGCWSTSSITATSNKIITKKYVVYSVLSK 336
           PGC+S     A  +K + KKY   S  +K
Sbjct: 542 PGCFSLFRGKALMDKSVMKKYTTRSTQAK 570


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 250 PGCWSTSSITATSNKIITKKYVVYSVLSK 336
           PGC+S     A  +K + KKY   S  +K
Sbjct: 775 PGCFSLFRGKALMDKSVMKKYTTRSTQAK 803


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 250 PGCWSTSSITATSNKIITKKYVVYSVLSK 336
           PGC+S     A  +K + KKY   S  +K
Sbjct: 775 PGCFSLFRGKALMDKSVMKKYTTRSTQAK 803


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 163 ITLMFLCWATFLKIWLL 113
           +T    CW++FLKI +L
Sbjct: 544 VTYQLYCWSSFLKISVL 560


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +3

Query: 93  IRNLLRANNQIFKNVAQQRNMSVICTPPRNKVSR 194
           +RNL +     F+NVA+ R + + C    N + R
Sbjct: 207 LRNLDKIVTNGFRNVAESRKIFIECIEQYNVILR 240


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -1

Query: 181 FLGGVQITLMFLCWATFLKIW 119
           F G +Q  ++   W T +K W
Sbjct: 126 FFGSIQFIIISKHWVTIMKEW 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,830
Number of Sequences: 336
Number of extensions: 1761
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8857716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)