Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_D15
         (409 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006662-3|AAF39895.1|  368|Caenorhabditis elegans Hypothetical ...    32   0.18 
Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical pr...    28   2.3  
U41538-5|AAG00012.2|  762|Caenorhabditis elegans Hypothetical pr...    28   3.0  
AF098997-10|AAC68712.2|  325|Caenorhabditis elegans Serpentine r...    27   3.9  
AF067211-8|ABB51202.1|   99|Caenorhabditis elegans Hypothetical ...    27   6.9  
Z83731-6|CAN86605.2|  208|Caenorhabditis elegans Hypothetical pr...    26   9.1  
Z83731-5|CAN86604.2|  223|Caenorhabditis elegans Hypothetical pr...    26   9.1  

>AC006662-3|AAF39895.1|  368|Caenorhabditis elegans Hypothetical
           protein H23L24.4 protein.
          Length = 368

 Score = 31.9 bits (69), Expect = 0.18
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 124 IWLLARSKFLIPNILF*YNYSSKCSLKFFYVKLTM 20
           +W    SK+L+PN +F Y  SS C+  + +V L +
Sbjct: 35  LWDRTYSKYLLPNSIFLYKRSSTCTRTYIFVILRL 69


>Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical
           protein Y70C5A.2 protein.
          Length = 1037

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -1

Query: 184 LFLGGVQITLMFLCWATFLKIWLLA 110
           LFL G+Q+TL+F C+  FL I  LA
Sbjct: 214 LFLLGIQVTLLF-CFLLFLPICFLA 237


>U41538-5|AAG00012.2|  762|Caenorhabditis elegans Hypothetical
           protein R04E5.2 protein.
          Length = 762

 Score = 27.9 bits (59), Expect = 3.0
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +3

Query: 114 NNQIFKNVAQQRNMSVICTPPRNKVSRGEM-IFLASLM 224
           N + F+N+ Q+    V+  PP+N  S G + +F A +M
Sbjct: 572 NPKAFENLIQRNIREVLIVPPKNSTSPGTLNLFEAGVM 609


>AF098997-10|AAC68712.2|  325|Caenorhabditis elegans Serpentine
           receptor, class i protein43 protein.
          Length = 325

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -1

Query: 193 LETLFLGGVQITLMFLCWATFLKIWLLARSKFLIPNILF 77
           + T  L G+Q  L+FLC+A   +     +   +IP ILF
Sbjct: 91  ITTHLLLGIQYVLLFLCFARRHQAIAKIKQHHVIPEILF 129


>AF067211-8|ABB51202.1|   99|Caenorhabditis elegans Hypothetical
           protein B0205.13 protein.
          Length = 99

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 257 HPGWDGRPAHHHQAGEEDHLTSGNLVSWRSADNAHVP 147
           HP W+    HHHQ   + H  + N V+ ++A +  +P
Sbjct: 54  HPWWN----HHHQCWHQYHHRTENTVNSQNAPSQVIP 86


>Z83731-6|CAN86605.2|  208|Caenorhabditis elegans Hypothetical
           protein M04C9.1b protein.
          Length = 208

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 227 HHQAGEEDHLTSGNLVSWRSADN 159
           +HQ  E+ +L  GN VS  S DN
Sbjct: 100 YHQKDEKGYLPEGNKVSCESVDN 122


>Z83731-5|CAN86604.2|  223|Caenorhabditis elegans Hypothetical
           protein M04C9.1a protein.
          Length = 223

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 227 HHQAGEEDHLTSGNLVSWRSADN 159
           +HQ  E+ +L  GN VS  S DN
Sbjct: 115 YHQKDEKGYLPEGNKVSCESVDN 137


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,020,601
Number of Sequences: 27780
Number of extensions: 159292
Number of successful extensions: 398
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)