Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_D09
         (838 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.0  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   5.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   6.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 7/56 (12%)
 Frame = -1

Query: 574  NVMIQSSKLWLCHFLTIFEQLDHRLYLQIQC-------HCTSFLMGMYICPAIQVK 428
            NV++    L+LC F       D R+ L I+         C  F  G++IC  I  K
Sbjct: 1126 NVLLNCVYLFLCGFCVYEFASDERIKLVIKAIIIMILSGCIIFTEGIWICSLIHRK 1181


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -3

Query: 137  TCKVTSYMTLAIVEIIIMNDDIGNYFSTLSVGSLFIC 27
            T   T+  T  + ++I    D G Y+   S  S ++C
Sbjct: 1188 TTSTTTRPTTTVSQLIDDKCDSGQYYPHESCSSFYVC 1224


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 720 LYKLFSVLQFLFCGIIVSCIIL*IHADFSNK 628
           L+ + + L F  CG   S + + +  D +NK
Sbjct: 346 LFNIDNALLFAICGSAFSYLFIMLQFDLNNK 376


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -2

Query: 786 TTDSKSWCDNWLN*LIFVV*YFLYKLFSVLQFLFCGIIVSCIIL 655
           TT    WCD  +  + F +    +KL  +  FL   I  S ++L
Sbjct: 13  TTKLLLWCDQTIGLITFDINTPSFKLSKIRSFL--NITASAVLL 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,998
Number of Sequences: 336
Number of extensions: 4185
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)