Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_D09
(838 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1672.03c |||guanine deaminase |Schizosaccharomyces pombe|chr... 169 3e-43
SPAC1F8.04c |||hydrolase |Schizosaccharomyces pombe|chr 1|||Manual 43 6e-05
SPBPB21E7.09 ||SPAPB21E7.09, SPAPB21E7.09|L-asparaginase |Schizo... 28 1.9
SPAC186.03 |||L-asparaginase|Schizosaccharomyces pombe|chr 1|||M... 28 1.9
SPAC977.12 |||L-asparaginase |Schizosaccharomyces pombe|chr 1|||... 27 3.3
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 27 3.3
SPBPB8B6.05c |||L-asparaginase |Schizosaccharomyces pombe|chr 2|... 27 3.3
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 26 5.8
SPBC776.09 |ste13||ATP-dependent RNA helicase Ste13|Schizosaccha... 26 7.6
SPAC57A10.07 |||conserved protein |Schizosaccharomyces pombe|chr... 26 7.6
SPCC364.05 |vps3||GTPase regulator Vps3 |Schizosaccharomyces pom... 26 7.6
>SPCC1672.03c |||guanine deaminase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 527
Score = 169 bits (412), Expect = 3e-43
Identities = 90/224 (40%), Positives = 126/224 (56%), Gaps = 6/224 (2%)
Frame = +1
Query: 178 FVGAYAHSENKRQLSVCFGFLTIENGKIT---QKGSIEEFEELLSAGKFSEHIVINLSDS 348
FVG H+ + +L + + + NGKI + + + EE S E + L
Sbjct: 9 FVGKLIHTPSLGELEITDATVGVYNGKIVFLEKSMTPKTLEEAKSHHLLKEATIHKLKPL 68
Query: 349 QLIIPGFIDCHIHAPQFPNIGLGLDRPLLEWLDKYTFPLEKKYSDTVFASKVYDQVVQRL 528
Q + PG ID HIHAPQ+PN G+G+D PLL+WL+KYTFPLE +D A +VY +VV+R
Sbjct: 69 QFMFPGLIDTHIHAPQYPNSGIGIDVPLLQWLEKYTFPLESSLADLEEARQVYKRVVERT 128
Query: 529 LKNGTTTACYFGSLHLDGTLELVKSVLKYHQRAFVGKVSM-NLQNDAGYYNSTEKELQDT 705
L NGTT A YF +LH + L + Y QRA++GK +M NL D S E L+ T
Sbjct: 129 LSNGTTFASYFSTLHTPTSALLAEICYSYGQRAYIGKCNMNNLSPDHYCEKSAESSLEAT 188
Query: 706 EEFV--QKVLXYKNELIQPVVTPRFAVSCDHQLXSGLAMIANKY 831
+ + +L K E++ P++TPRFA SC L SG +A K+
Sbjct: 189 RQLISYMSILDPKREMVTPIITPRFAPSCTEDLLSGCGELAEKH 232
>SPAC1F8.04c |||hydrolase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 42.7 bits (96), Expect = 6e-05
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Frame = +1
Query: 343 DSQLIIPGFIDCHIHAPQFPNIGLGLDRPLLEWLDKYTFPLEKKYS--DTVFASKVYDQV 516
+ +++PG I H+H Q D PL+ WL + ++ ++ D AS++
Sbjct: 54 EGHIVMPGLISLHVHLAQSLLRSAADDLPLISWLCDTVWKMQGNFTQEDGYVASQL---T 110
Query: 517 VQRLLKNGTTTACYFGSLHLDGTLELVKSVLKYHQRAFVGKVSMN 651
+ +LK+GTTT G VK+V++ R +GKV M+
Sbjct: 111 IAEMLKSGTTTFVEALFAQRYGIEGAVKAVIESGIRGCIGKVVMD 155
>SPBPB21E7.09 ||SPAPB21E7.09, SPAPB21E7.09|L-asparaginase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 360
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 95 IIIMNDDIGNYFSTLSVGSLFICTFKSPSAG 3
+I++ND IG+ F T + TFKS AG
Sbjct: 187 MILLNDRIGSAFYTTKTNGNMLDTFKSYEAG 217
>SPAC186.03 |||L-asparaginase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 360
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 95 IIIMNDDIGNYFSTLSVGSLFICTFKSPSAG 3
+I++ND IG+ F T + TFKS AG
Sbjct: 187 MILLNDRIGSAFYTTKTNGNMLDTFKSYEAG 217
>SPAC977.12 |||L-asparaginase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 356
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 95 IIIMNDDIGNYFSTLSVGSLFICTFKSPSAG 3
++++ND IG+ F T + TFKS AG
Sbjct: 184 LVLLNDRIGSAFYTTKTNGNTLDTFKSYEAG 214
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 151 NRKMTRKHTFVGAYAHSENKRQLSVCFGFLTI 246
N + +R HT Y EN R +C G L +
Sbjct: 688 NERSSRSHTVFMLYIDGENSRTKQICKGTLNL 719
>SPBPB8B6.05c |||L-asparaginase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 356
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -3
Query: 95 IIIMNDDIGNYFSTLSVGSLFICTFKSPSAG 3
++++ND IG+ F T + TFKS AG
Sbjct: 184 LVLLNDRIGSAFYTTKTNGNTLDTFKSYEAG 214
>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 390
Score = 26.2 bits (55), Expect = 5.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -3
Query: 314 NLPALRSSSNSSIDPFCVIFPFSIVKNPKHTE 219
+LP S+S +S+ PF PFSI + P H E
Sbjct: 319 SLPISPSTSQNSVQPF----PFSIQQPPLHLE 346
>SPBC776.09 |ste13||ATP-dependent RNA helicase
Ste13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 25.8 bits (54), Expect = 7.6
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +1
Query: 220 SVCFGFLTIENGKITQKGSIEEFEELLSAGKFSEHIVINLSDSQLIIPGFIDCHIHAPQF 399
S C F+ E K+ E+LLS + I + + LI+ F+D H++ P
Sbjct: 185 SECTTFVMDEADKLLSPEFTPIIEQLLSYFPKNRQISLYSATFPLIVKNFMDKHLNKPYE 244
Query: 400 PNI 408
N+
Sbjct: 245 INL 247
>SPAC57A10.07 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 311
Score = 25.8 bits (54), Expect = 7.6
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = -1
Query: 571 VMIQSSKLWLCHFLTIFEQLDHRLYLQIQCHCTSFLMGMYICPAIQVKVCLSRGQCW--G 398
+ + +S + LC F TIF + H +QC + L+G + + ++ W G
Sbjct: 35 IALYASLILLCIFFTIFSTMSHP---SLQCFSPTSLVGAQPLKNLTHLIIVAGHAVWLGG 91
Query: 397 IVEHEYDSQ*IQE 359
E DS+ I E
Sbjct: 92 STNGEDDSEWILE 104
>SPCC364.05 |vps3||GTPase regulator Vps3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 910
Score = 25.8 bits (54), Expect = 7.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 369 Y*LSYSCSTIPQHW 410
Y LSY C IP HW
Sbjct: 841 YTLSYVCEQIPDHW 854
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,419,008
Number of Sequences: 5004
Number of extensions: 72062
Number of successful extensions: 204
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 412451140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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