Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_D09
         (838 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0282 - 16749358-16749445,16749640-16749695,16749965-167501...    34   0.16 
01_07_0201 + 41956938-41957022,41957123-41957214,41957460-419575...    32   0.49 
05_02_0030 + 5826065-5826092,5826307-5828309,5828412-5828732,582...    31   1.1  
11_04_0096 + 13435988-13436803,13436880-13437053,13437673-134378...    29   4.6  

>12_02_0282 -
           16749358-16749445,16749640-16749695,16749965-16750137,
           16750768-16750924,16751279-16751422,16751959-16752134,
           16753024-16753045,16753845-16753937,16754259-16754431,
           16754550-16754760
          Length = 430

 Score = 33.9 bits (74), Expect = 0.16
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +1

Query: 349 QLIIPGFIDCHIHAPQFPNIGLGLDRPLLEWLDKYTFPLEKKYSD 483
           ++++PGF++ H+H  Q    G+  D  L+ WL    +P E   ++
Sbjct: 66  RILLPGFVNTHVHTSQQLARGIADDVDLMAWLHGRIWPYESHMTE 110


>01_07_0201 +
           41956938-41957022,41957123-41957214,41957460-41957561,
           41957691-41957763,41958297-41958403,41958476-41958599,
           41959004-41959198,41959515-41959600,41959695-41959802,
           41960171-41960266,41960347-41960445,41960562-41960636,
           41961040-41961171,41961252-41961367,41961935-41962109
          Length = 554

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 18/63 (28%), Positives = 30/63 (47%)
 Frame = +1

Query: 199 SENKRQLSVCFGFLTIENGKITQKGSIEEFEELLSAGKFSEHIVINLSDSQLIIPGFIDC 378
           S+  R L      + + N  I        F E ++  K    + +NLS + +++PGFID 
Sbjct: 25  SDLSRDLGEAVADMILANATIYTADPAMPFAEAMAELKGRHTMELNLSGN-VVLPGFIDS 83

Query: 379 HIH 387
           H+H
Sbjct: 84  HVH 86


>05_02_0030 +
           5826065-5826092,5826307-5828309,5828412-5828732,
           5828821-5828907,5828981-5829583,5829680-5829844,
           5829941-5830235,5830320-5830534,5830621-5830926,
           5831200-5831263,5831384-5831623,5831756-5831853
          Length = 1474

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = +1

Query: 238 LTIENGKITQKGSIEEFEELLSAGKFSEHIVINLSDSQLII 360
           L +ENG+ITQ+G+   + ELL +G   E +V    DS+ I+
Sbjct: 813 LVMENGEITQEGT---YSELLQSGTAFEQLVNAHKDSKTIL 850


>11_04_0096 +
           13435988-13436803,13436880-13437053,13437673-13437834,
           13438548-13438690,13439059-13439134,13439231-13439403,
           13439482-13439563,13439949-13440026,13440369-13440461,
           13441026-13441187,13441225-13441530,13442265-13442369,
           13443097-13443243
          Length = 838

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 8/110 (7%)
 Frame = +1

Query: 178 FVGAYAHSENKRQLSVCFGFLTIENGKITQKGSIEEFEELLSAGKFSEHIVINLSDSQLI 357
           FV +Y H E + ++ V        +G    +  +E F++  +A   + +I + +    + 
Sbjct: 512 FVTSYQHPEGQMRIRVTTICRKWVDGSTNTEELVEGFDQETAAVVLARYISLKMEMEVIR 571

Query: 358 IPGFIDCHIHA--------PQFPNIGLGLDRPLLEWLDKYTFPLEKKYSD 483
           +      HI+         P+F NI +  +     WLD+    L  ++ D
Sbjct: 572 LSSIAHIHIYVNESRHLCVPRFINIYMNEEFDATRWLDRSLIRLCSRFGD 621


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,978,295
Number of Sequences: 37544
Number of extensions: 382065
Number of successful extensions: 815
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2315199948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)