Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_D09
         (838 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF519470-2|ABP73550.1|  177|Anopheles gambiae CTL4 protein.            27   0.71 
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   8.7  
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    23   8.7  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   8.7  

>EF519470-2|ABP73550.1|  177|Anopheles gambiae CTL4 protein.
          Length = 177

 Score = 27.1 bits (57), Expect = 0.71
 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
 Frame = +1

Query: 544 TTACYFGSLHLDGTLELVKSVLKYHQRAFVGKVSMNLQNDAGYYNSTEKELQDTEEFVQK 723
           T  C    LHLDG   L +S  +     ++G  S+ +      +  T++E++++ E+   
Sbjct: 81  TNECQLLQLHLDGDRRLTRSQKRSKIPYWIGANSL-IAGQGLRWGLTDQEVKESAEWADG 139

Query: 724 VLXYKNEL------IQPVVTPRFAVSCDHQ 795
           V    N +      IQ       A SCD +
Sbjct: 140 VAPANNRVEPFCVYIQGSTMSWVATSCDDE 169


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -3

Query: 422 SKPRPMLGNCGA*I*Q-SINPGIIS*LSLRFITMCSLNLPALRSSSNSSIDP 270
           S PRP  G     I + S +PG+   ++ R  T+C+ + P   +++  ++ P
Sbjct: 128 SDPRPATGRKRRRIIEDSASPGVNKIVNSRGNTLCAASSPNAYTNTTIAVQP 179


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 6/28 (21%), Positives = 16/28 (57%)
 Frame = -1

Query: 727 VLSVQTLQCLAIPFLWNYSILHHSVNSC 644
           +  V  ++C  +P+L+N  ++   + +C
Sbjct: 118 IAEVNRMRCSPLPYLFNRCLMEVGIGNC 145


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -3

Query: 38  LFICTFKSPSAG 3
           LFIC + SPSAG
Sbjct: 84  LFICCYVSPSAG 95


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 840,698
Number of Sequences: 2352
Number of extensions: 17675
Number of successful extensions: 66
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88478514
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)