Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_D07
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.57 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   0.76 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   1.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.8  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    22   3.1  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   3.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   3.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.57
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 345 LCKKYFFFK**HLNCFYYYCCFFV 274
           LC  YF      L C YY+ C F+
Sbjct: 131 LCIYYFVVPLFFLLCIYYFYCAFI 154



 Score = 24.2 bits (50), Expect = 0.57
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 345 LCKKYFFFK**HLNCFYYYCCFFV 274
           LC  YF+     L C YY+C  F+
Sbjct: 283 LCIYYFYCALIILLCIYYFCRAFI 306



 Score = 22.6 bits (46), Expect = 1.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 345 LCKKYFFFK**HLNCFYYYCCFFV 274
           LC  YF++    L C YY+   F+
Sbjct: 98  LCTYYFYYAFIILLCVYYFYYAFI 121



 Score = 21.4 bits (43), Expect = 4.0
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -3

Query: 345 LCKKYFFFK**HLNCFYYYCCFFV 274
           LC  YF      L C YY+   F+
Sbjct: 197 LCLDYFTLHLLFLPCIYYFYSAFI 220


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 0.76
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 163 YSKRYYAIDSVLACLTFFFHRIYSFSKGQSEHFC 62
           +S R   + S + CL  F HR   F   +++ FC
Sbjct: 11  HSVRIVFVQSEIFCLVNFNHRESYFRLSKAKSFC 44


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 34  IIVSSKLVNRKNVQIALWRKSRSDGRKTSS 123
           II    ++    V +ALW + R  GRK  S
Sbjct: 44  IIFLVTVIGNSTVLLALWTRRRYAGRKKLS 73


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 309 LNCFYYYCCFFVGTHSCGILIMSLHTA 229
           +N    Y C+  G  SC ++I S+  A
Sbjct: 137 INISATYICYAFGKFSCKVMIQSVSFA 163


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 309 LNCFYYYCCFFVGTHSCGILIMSLHTA 229
           +N    Y C+  G  SC ++I S+  A
Sbjct: 370 INISATYICYAFGKFSCKVMIQSVSFA 396


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 309 LNCFYYYCCFFVGTHSCGILIMSLHTA 229
           +N    Y C+  G  SC ++I S+  A
Sbjct: 370 INISATYICYAFGKFSCKVMIQSVSFA 396


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -2

Query: 217 LKTTMFQYQGSDSYNCTHYSKRYYAI 140
           LKT M  + G   Y C H  +++  +
Sbjct: 25  LKTHMRLHTGERPYRCEHCDRQFVQV 50


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 24  KLKNNCF*QIS*SQKCSDCPLEK 92
           K  NNC   +   +KC +C L+K
Sbjct: 225 KYGNNCEIDMYMRRKCQECRLKK 247


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -2

Query: 217 LKTTMFQYQGSDSYNCTHYSKRYYAI 140
           LKT M  + G   Y C H  +++  +
Sbjct: 178 LKTHMRLHTGERPYRCEHCDRQFVQV 203


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/11 (54%), Positives = 6/11 (54%)
 Frame = -2

Query: 277  CRNSFLWNIDH 245
            C N   WN DH
Sbjct: 2265 CPNGLFWNKDH 2275


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = -1

Query: 131 SRVLDVFLPSDLLFLQRAI*TFLRLTNLLETIIFQFXLYC 12
           S + ++ L  +   L R    F+ + +LL  +IF   ++C
Sbjct: 96  STLFEILLKLESKDLSRTFYGFVIVAHLLFLVIFVLNIWC 135



 Score = 20.6 bits (41), Expect = 7.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 40  VSSKLVNRKNVQIALWRKSRSD 105
           VSS++ N +   +  WR  R D
Sbjct: 321 VSSEIYNVEYKNVEFWRNIRED 342


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,549
Number of Sequences: 336
Number of extensions: 1282
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)