Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_D05
(770 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026214-5|AAB71310.1| 525|Caenorhabditis elegans Hypothetical ... 146 2e-35
AL034489-1|CAA22461.1| 538|Caenorhabditis elegans Hypothetical ... 110 9e-25
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 32 0.52
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 31 0.69
AC006833-4|AAF60948.1| 125|Caenorhabditis elegans Hypothetical ... 30 1.6
U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical pr... 30 2.1
U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical pr... 30 2.1
U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical p... 29 2.8
Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z74031-13|CAE54903.1| 383|Caenorhabditis elegans Hypothetical p... 29 3.7
Z74031-12|CAE54902.1| 460|Caenorhabditis elegans Hypothetical p... 29 3.7
Z74031-11|CAD54138.1| 474|Caenorhabditis elegans Hypothetical p... 29 3.7
AF016450-7|AAB65986.1| 323|Caenorhabditis elegans Serpentine re... 29 3.7
Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocar... 29 4.8
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 28 6.4
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 28 8.5
>AF026214-5|AAB71310.1| 525|Caenorhabditis elegans Hypothetical
protein F52H2.6 protein.
Length = 525
Score = 146 bits (354), Expect = 2e-35
Identities = 81/204 (39%), Positives = 109/204 (53%), Gaps = 10/204 (4%)
Frame = +1
Query: 184 LPMSAAWKLWSIIRNYVVFKMNSAPKMHDDKVKEVQRQIKEWLSGDKSTHLCTARPTWQT 363
LP+S + RN +V +NSAP H KVK +Q Q+KEW + + L ARP W T
Sbjct: 35 LPLSFLFNTVFDFRNRIVHAVNSAPNAHVRKVKHIQEQLKEWNDNGRKSKLVNARPGWLT 94
Query: 364 MSFRHSMYKRTFTNIQIN-LVDVLEVDKENMTVRCEPLVTMGQLSRTXXXXXXXXXXXXX 540
MSFR +YK T I + L D+L++D E MTV+ EP VTMGQLS+
Sbjct: 95 MSFRFPLYKENATKIATDKLFDILDLDVEKMTVKAEPGVTMGQLSQYLISRGYTLPVLPE 154
Query: 541 XDQLXXXXXXXXXXXXXXSHVHGLFQHVCLEYELVLADGSVVN-----CSKDENA----D 693
D L S +G+FQH+C YE+V++DG + N +K E A
Sbjct: 155 LDDLTVGGLINGCGVESGSFKYGMFQHICTGYEVVMSDGELKNVYPDSAAKTEQAKQDNS 214
Query: 694 LFYAVPWSYGTLGFLTSXVIKVIP 765
LF+A+PWS GT+ FL + IK+IP
Sbjct: 215 LFFAIPWSQGTICFLVAATIKIIP 238
>AL034489-1|CAA22461.1| 538|Caenorhabditis elegans Hypothetical
protein Y7A5A.1 protein.
Length = 538
Score = 110 bits (265), Expect = 9e-25
Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 3/196 (1%)
Frame = +1
Query: 184 LPMSAAWKLWSIIRNYVVFKMNSAPKMHDDKVKEVQRQIKEW--LSGDKSTHLCTARPTW 357
LP S + L+ R ++ K+ SA H +V+++Q Q+ EW L + LCTARP W
Sbjct: 27 LPASFLFDLFIQFRIWLDRKL-SATTSHQQRVQKIQDQVTEWSKLPDSEQKPLCTARPNW 85
Query: 358 QTMSFRHSMYKRTFTNIQINLVDVLEVDKENMTVRCEPLVTMGQLSRTXXXXXXXXXXXX 537
++S KR + I+L DVL +D++N+TV EP +T+ ++ +
Sbjct: 86 LSLSTTF-FDKRKCHQVPIDLHDVLSLDEKNLTVTVEPNITVREICKFLIPKGYTLAVTL 144
Query: 538 XXDQLXXXXXXXXXXXXXXSHVHGLFQHVCLEYELVLADGSVVNCS-KDENADLFYAVPW 714
SH GL+Q + YE+V ADG+V+ + +E++DLFY +PW
Sbjct: 145 EIGDATLGGLAFGVGMTTYSHKVGLYQEAIVSYEVVTADGNVITVTDSNEHSDLFYCLPW 204
Query: 715 SYGTLGFLTSXVIKVI 762
S+GTLGFL ++++
Sbjct: 205 SHGTLGFLVGLTLRIV 220
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 31.9 bits (69), Expect = 0.52
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = -1
Query: 665 TTEPSARTSSYSRHTC*KSPWTCDVVSTPVPITRPPTVSWSNSGTTGSAKPSGANVRDS* 486
TT+P+ T++ + T + T +TP T PT + + S TT + + +
Sbjct: 259 TTKPTTTTTTPTTTTTTPTTTTTTPTTTPTTTTTTPTTTTTESTTTETTSTTTPTTTTTA 318
Query: 485 PIVTRGSQRTVIFSLSTSKTSTR 417
P T + T F +T T+T+
Sbjct: 319 PTTTT-TASTTTFKTTTITTTTQ 340
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 31.5 bits (68), Expect = 0.69
Identities = 25/97 (25%), Positives = 41/97 (42%)
Frame = -1
Query: 707 TA*NRSAFSSLLQLTTEPSARTSSYSRHTC*KSPWTCDVVSTPVPITRPPTVSWSNSGTT 528
T + + SS LTTE R SS + T +P T + P+ + TVS T
Sbjct: 289 TTSSSTMLSSTTLLTTETETRESSSTGSTQTTTPSTEPSTTITTPMEQSSTVSSVQKTRT 348
Query: 527 GSAKPSGANVRDS*PIVTRGSQRTVIFSLSTSKTSTR 417
KPS + + + S + + S+S T+++
Sbjct: 349 SEDKPSSSTTVPTSASTSESSTSSPMAETSSSSTTSQ 385
>AC006833-4|AAF60948.1| 125|Caenorhabditis elegans Hypothetical
protein ZK616.3 protein.
Length = 125
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +2
Query: 47 VRNIVLRADSEEFDSTLKNKMAIETETFLEYLASGISMGDSNIGPXCLCQRHGS 208
V++ VL +EF+ +K++ +E + +Y G + D I C C GS
Sbjct: 5 VKDEVLYIGKKEFEEPIKSEWVLEMQNTEKYKTIGPTFPDGTINWQCPCMAGGS 58
>U88179-4|AAU05547.1| 576|Caenorhabditis elegans Hypothetical
protein R57.1b protein.
Length = 576
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 352 TWQTMSFRHSMYKRTFTNIQINLVDVLEVDK 444
TW T H+MY+ F+NI + D L V K
Sbjct: 535 TWDTYPLYHTMYETPFSNIHLLDTDNLSVHK 565
>U88179-3|AAX88809.1| 751|Caenorhabditis elegans Hypothetical
protein R57.1c protein.
Length = 751
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 352 TWQTMSFRHSMYKRTFTNIQINLVDVLEVDK 444
TW T H+MY+ F+NI + D L V K
Sbjct: 535 TWDTYPLYHTMYETPFSNIHLLDTDNLSVHK 565
>U88179-2|AAU05546.1| 770|Caenorhabditis elegans Hypothetical
protein R57.1a protein.
Length = 770
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 352 TWQTMSFRHSMYKRTFTNIQINLVDVLEVDK 444
TW T H+MY+ F+NI + D L V K
Sbjct: 554 TWDTYPLYHTMYETPFSNIHLLDTDNLSVHK 584
>Z81491-10|CAB04023.3| 282|Caenorhabditis elegans Hypothetical
protein D1086.6 protein.
Length = 282
Score = 29.5 bits (63), Expect = 2.8
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 3/116 (2%)
Frame = -1
Query: 683 SSLLQLTTEPSARTSSYSRHTC*KSPWTCDVVSTPVPITRPPTVSWSNSGTTG-SAKPSG 507
SS Q TT PS T+ T +P T +TP T + + + GTT A PS
Sbjct: 144 SSTSQSTTTPSTTTTIIVSSTTTTNPTTSTTPTTPTTTTPTTSTTTTARGTTDIPAPPSV 203
Query: 506 ANVRDS*PIVTRGSQRTVIF--SLSTSKTSTRLICMLVNVLLYMLCRKDIVCHVGR 345
+ +Q T+ F + + + +C+ +N + L +D+ + G+
Sbjct: 204 VEKWCMKKLQKNNAQFTIDFIEEAESDEGTNAELCIYLNRAGFKLRLEDLTEYCGK 259
>Z79759-5|CAB02140.2| 409|Caenorhabditis elegans Hypothetical
protein ZK858.5 protein.
Length = 409
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = +1
Query: 211 WSIIRNYVVFKMNSAPKMHDDKVKEVQRQIKEWLSGDKS 327
W++ RNY++ + + P + DD+++ + K+W + +KS
Sbjct: 351 WALWRNYLIHRFSLDPLISDDRLR---TECKKWQTEEKS 386
>Z74031-13|CAE54903.1| 383|Caenorhabditis elegans Hypothetical
protein F32D8.12c protein.
Length = 383
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +1
Query: 604 HGLFQHVCLEYELVLADGSVVN------CSKDENADLFYAVPW--SYGTLGFLTSXVIKV 759
+G + + E+VLADG++++ C + +A + + S GTLG +T +KV
Sbjct: 75 YGTMKENVVNLEVVLADGTIIDTKGKGRCPRKSSAGFNFTELFVGSEGTLGIITEATVKV 134
Query: 760 IP 765
P
Sbjct: 135 HP 136
>Z74031-12|CAE54902.1| 460|Caenorhabditis elegans Hypothetical
protein F32D8.12b protein.
Length = 460
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +1
Query: 604 HGLFQHVCLEYELVLADGSVVN------CSKDENADLFYAVPW--SYGTLGFLTSXVIKV 759
+G + + E+VLADG++++ C + +A + + S GTLG +T +KV
Sbjct: 152 YGTMKENVVNLEVVLADGTIIDTKGKGRCPRKSSAGFNFTELFVGSEGTLGIITEATVKV 211
Query: 760 IP 765
P
Sbjct: 212 HP 213
>Z74031-11|CAD54138.1| 474|Caenorhabditis elegans Hypothetical
protein F32D8.12a protein.
Length = 474
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +1
Query: 604 HGLFQHVCLEYELVLADGSVVN------CSKDENADLFYAVPW--SYGTLGFLTSXVIKV 759
+G + + E+VLADG++++ C + +A + + S GTLG +T +KV
Sbjct: 166 YGTMKENVVNLEVVLADGTIIDTKGKGRCPRKSSAGFNFTELFVGSEGTLGIITEATVKV 225
Query: 760 IP 765
P
Sbjct: 226 HP 227
>AF016450-7|AAB65986.1| 323|Caenorhabditis elegans Serpentine
receptor, class t protein70 protein.
Length = 323
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 105 LFFNVESNSSESARNTIFLTTCLSLHCY 22
LF + ES RN L CL +HCY
Sbjct: 238 LFSKISFIDMESKRNQAILNCCLIIHCY 265
>Z81048-9|CAI79126.1| 560|Caenorhabditis elegans Hypothetical
protein C41G7.5b protein.
Length = 560
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 294 TDKRMVIRGQVDSSLHSPANMANNVFSTQHVQEDIYQHTN*SSR 425
++ R IR Q+DS+ H P + A+N F Q Y N ++R
Sbjct: 137 SEDRDDIRQQLDSNFHIPTSSASNQFDVFAPQNSKYLERNVNAR 180
>Z81048-8|CAB51463.1| 602|Caenorhabditis elegans Hypothetical
protein C41G7.5a protein.
Length = 602
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 294 TDKRMVIRGQVDSSLHSPANMANNVFSTQHVQEDIYQHTN*SSR 425
++ R IR Q+DS+ H P + A+N F Q Y N ++R
Sbjct: 179 SEDRDDIRQQLDSNFHIPTSSASNQFDVFAPQNSKYLERNVNAR 222
>AF039570-1|AAC00000.1| 602|Caenorhabditis elegans aryl hydrocarbon
receptor orthologAHR-1 protein.
Length = 602
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 294 TDKRMVIRGQVDSSLHSPANMANNVFSTQHVQEDIYQHTN*SSR 425
++ R IR Q+DS+ H P + A+N F Q Y N ++R
Sbjct: 179 SEDRDDIRQQLDSNFHIPTSSASNQFDVFAPQNSKYLERNVNAR 222
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = -1
Query: 665 TTEPSARTSSYSRHTC*KSPWTCDVVSTPVPITRPPTVSWSNSGTTGS 522
TTEP+ TS+ ++ T P + +ST T PT + + + TT S
Sbjct: 275 TTEPTTTTSTTTQTTT-TVPTSTSTISTTSTTTTTPTTTTTTTSTTTS 321
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 27.9 bits (59), Expect = 8.5
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = -1
Query: 668 LTTEPSARTSSYSRHTC*--KSPWTCDVVSTPVPITRPPTVSWSNSGT----TGSAKPSG 507
+T+ P R S +++H K P T +TPVP P T S + S T T S+ +
Sbjct: 411 VTSPPVIRPSYWTKHRVKSTKEPKTTIFTTTPVPC--PTTTSTTTSATTLVPTTSSSTTT 468
Query: 506 ANVRDS*PIVTRGSQRTVIFSLSTSKTST 420
P+ + ++ T +++ TST
Sbjct: 469 TTTTTPVPVTSTTTEPTTTTYTTSTSTST 497
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,107,030
Number of Sequences: 27780
Number of extensions: 390511
Number of successful extensions: 1142
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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