Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_D04
(733 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W4I3 Cluster: CG7038-PA; n=5; Diptera|Rep: CG7038-PA ... 182 8e-45
UniRef50_UPI0000D57313 Cluster: PREDICTED: similar to CG7038-PA;... 146 4e-34
UniRef50_Q56FI8 Cluster: Putative mitochondrial ribosomal protei... 114 2e-24
UniRef50_UPI00003C00AD Cluster: PREDICTED: similar to mitochondr... 99 1e-19
UniRef50_Q8TCC3 Cluster: 39S ribosomal protein L30, mitochondria... 83 7e-15
UniRef50_Q4S0N9 Cluster: Chromosome 2 SCAF14781, whole genome sh... 77 3e-13
UniRef50_UPI0000585270 Cluster: PREDICTED: hypothetical protein;... 75 1e-12
UniRef50_Q9UA63 Cluster: Putative uncharacterized protein W04B5.... 65 2e-09
UniRef50_Q5DDM7 Cluster: SJCHGC05377 protein; n=1; Schistosoma j... 54 5e-06
UniRef50_A7STG6 Cluster: Predicted protein; n=1; Nematostella ve... 49 1e-04
UniRef50_UPI0000DC0A88 Cluster: UPI0000DC0A88 related cluster; n... 43 0.009
UniRef50_Q4CV16 Cluster: Putative uncharacterized protein; n=2; ... 40 0.063
UniRef50_Q9U0Z7 Cluster: Hypothetical transmembrane protein L568... 38 0.25
UniRef50_Q9X1J1 Cluster: 50S ribosomal protein L30; n=19; Bacter... 37 0.59
UniRef50_Q74MH0 Cluster: NEQ025; n=1; Nanoarchaeum equitans|Rep:... 36 1.4
UniRef50_A0B5V7 Cluster: Radical SAM domain protein; n=1; Methan... 35 1.8
UniRef50_Q6N4V1 Cluster: 50S ribosomal protein L30; n=31; Alphap... 35 2.4
UniRef50_A0RUE6 Cluster: Ribosomal protein L30/L7E; n=2; Thermop... 34 4.1
UniRef50_UPI000049A390 Cluster: hypothetical protein 14.t00038; ... 33 5.5
UniRef50_Q23QK5 Cluster: Putative uncharacterized protein; n=1; ... 33 7.2
UniRef50_Q237P5 Cluster: Putative uncharacterized protein; n=2; ... 33 7.2
UniRef50_Q0YL11 Cluster: Radical SAM; n=1; Geobacter sp. FRC-32|... 33 9.5
>UniRef50_Q9W4I3 Cluster: CG7038-PA; n=5; Diptera|Rep: CG7038-PA -
Drosophila melanogaster (Fruit fly)
Length = 180
Score = 182 bits (443), Expect = 8e-45
Identities = 87/174 (50%), Positives = 119/174 (68%), Gaps = 6/174 (3%)
Frame = +1
Query: 142 GKLLRNFNPLVSIIRSKGYKHPGGIRYPGG-----ITYYPRFPDYKDPEITPSKLFRVER 306
G+LL +RS G KH Y G ITYYPR PD++DP + P+KLFRV+R
Sbjct: 4 GRLLNPLRSTACSVRSYG-KHNKKFLYKNGQKFEGITYYPRTPDHQDPPVEPAKLFRVQR 62
Query: 307 IKSSKHFPYWQKRILDELKIH-EETRVTVVKNIPEINAKLWKIKHLIKITPIEFPYGEPT 483
IK K PYW+ RIL +L + +++ TVVKNIPE NA+LWKIKHLIK+TP+ FPYGEPT
Sbjct: 63 IKPLKGNPYWENRILKDLGLDGKQSDFTVVKNIPENNARLWKIKHLIKVTPVTFPYGEPT 122
Query: 484 ADDINYTILKENGQCLVTKKLEPEFGQIQALEEFDSDRKKMNSTTIKRDTRHRW 645
A D+ +TILKENG+CLVTK L P ++ A +++D K++++ +++D R +W
Sbjct: 123 AQDVRHTILKENGECLVTKDLGPIDTRLAARQDYDEQPKRLDTDLLRKDARLKW 176
>UniRef50_UPI0000D57313 Cluster: PREDICTED: similar to CG7038-PA;
n=2; Tribolium castaneum|Rep: PREDICTED: similar to
CG7038-PA - Tribolium castaneum
Length = 180
Score = 146 bits (355), Expect = 4e-34
Identities = 66/146 (45%), Positives = 101/146 (69%), Gaps = 1/146 (0%)
Frame = +1
Query: 211 GIRYPGGITYYPRFPDYKDPEITPSKLFRVERIKSSKHFPYWQKRILDELKI-HEETRVT 387
G++YPG YYPR+PD+KDP PSK+FRV+RIK+ K P+++K+IL E + +++ V
Sbjct: 30 GVQYPG-FKYYPRYPDFKDPPYEPSKVFRVQRIKALKGVPHYEKKILAEFHLTGKQSDVV 88
Query: 388 VVKNIPEINAKLWKIKHLIKITPIEFPYGEPTADDINYTILKENGQCLVTKKLEPEFGQI 567
+VKNIPE N +LWK+KHL++I P+ FP G P++ +LKENG+ K LEP ++
Sbjct: 89 IVKNIPENNQRLWKVKHLVQIKPVTFPDGFPSSP--KGAVLKENGELRAMKTLEPSEERL 146
Query: 568 QALEEFDSDRKKMNSTTIKRDTRHRW 645
Q E F + ++M+ T++RD+R +W
Sbjct: 147 QLAESFKTKAERMDGDTLRRDSRRKW 172
>UniRef50_Q56FI8 Cluster: Putative mitochondrial ribosomal protein
L30; n=2; Apocrita|Rep: Putative mitochondrial ribosomal
protein L30 - Lysiphlebus testaceipes (Greenbugs aphid
parastoid)
Length = 180
Score = 114 bits (275), Expect = 2e-24
Identities = 56/143 (39%), Positives = 86/143 (60%), Gaps = 1/143 (0%)
Frame = +1
Query: 232 ITYYPRFPDYKDPEITPSKLFRVERIKSSKHFPYWQKRILDELKIHE-ETRVTVVKNIPE 408
+ YYPR PD++DP I P+KL V R K K P+W K +LD K+ E ++ +T+VKN PE
Sbjct: 38 VNYYPRHPDHEDPPIEPTKLLVVRRCKPYKGNPWWDKNVLDMFKLKESKSAITIVKNTPE 97
Query: 409 INAKLWKIKHLIKITPIEFPYGEPTADDINYTILKENGQCLVTKKLEPEFGQIQALEEFD 588
I + LW+IKHLI++ P+ P P D T L ENG L+ +++P + +A +F
Sbjct: 98 ICSLLWQIKHLIEVKPLHAPDKLPEKDGPQSTWLHENGDLLIAPRVDPV--REKATIDFI 155
Query: 589 SDRKKMNSTTIKRDTRHRWNTGY 657
++ K ++ T++ + R RW Y
Sbjct: 156 NNPKHLDRETLEHELRMRWLNPY 178
>UniRef50_UPI00003C00AD Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L30 CG7038-PA; n=1; Apis
mellifera|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L30 CG7038-PA - Apis mellifera
Length = 177
Score = 99.1 bits (236), Expect = 1e-19
Identities = 58/151 (38%), Positives = 80/151 (52%), Gaps = 4/151 (2%)
Frame = +1
Query: 214 IRYPGGITYYPRFPDYKDPEITPSKLFRVERIKSSKHFPYWQKRILDELKIHE-ETR--V 384
++Y G + Y P D+ DP ITPSK+ V R+K K PYW+K+ L L E ET+
Sbjct: 27 VKY-GLVKYLPCKKDHVDPPITPSKILMVHRVKPFKGNPYWEKKTLKVLGFDEDETKRYP 85
Query: 385 TVVKNIPEINAKLWKIKHLIKITPIEFPYGEP-TADDINYTILKENGQCLVTKKLEPEFG 561
VKN PE+ LW +KHLIK+ P++ P P T DD + +NG K+ PE
Sbjct: 86 VFVKNTPEMCNLLWSVKHLIKVVPVKLPKNLPNTIDDFREYYIHDNGTIHFGGKINPE-- 143
Query: 562 QIQALEEFDSDRKKMNSTTIKRDTRHRWNTG 654
+ QA ++ + K + S TIK R W G
Sbjct: 144 RYQATMDYQNSIKLLKSATIKEKLRLLWLNG 174
>UniRef50_Q8TCC3 Cluster: 39S ribosomal protein L30, mitochondrial
precursor; n=27; Euteleostomi|Rep: 39S ribosomal protein
L30, mitochondrial precursor - Homo sapiens (Human)
Length = 161
Score = 83.0 bits (196), Expect = 7e-15
Identities = 41/96 (42%), Positives = 60/96 (62%)
Frame = +1
Query: 265 DPEITPSKLFRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLI 444
DP+ P KL V RIKS++ PYW+K I+ L + + V KNIP +NAKL +KHLI
Sbjct: 59 DPQ-NPHKLHIVTRIKSTRRRPYWEKDIIKMLGLEKAHTPQVHKNIPSVNAKLKVVKHLI 117
Query: 445 KITPIEFPYGEPTADDINYTILKENGQCLVTKKLEP 552
+I P++ P G P ++++ T LK G+ +V L+P
Sbjct: 118 RIKPLKLPQGLPAEENMSNTCLKSTGELVVQWHLKP 153
>UniRef50_Q4S0N9 Cluster: Chromosome 2 SCAF14781, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF14781, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 158
Score = 77.4 bits (182), Expect = 3e-13
Identities = 35/97 (36%), Positives = 60/97 (61%), Gaps = 1/97 (1%)
Frame = +1
Query: 265 DPEITPSKLFRVERIKSSKHFPYWQKRILDELKIHEETRVTVV-KNIPEINAKLWKIKHL 441
DP+ P KL V R++S PYW+K ++ L + +E+ V V+ KN P +N++L +KHL
Sbjct: 55 DPD-QPHKLHIVTRVRSVIRRPYWEKDMIKHLGLEKESHVPVIHKNTPAVNSQLKFVKHL 113
Query: 442 IKITPIEFPYGEPTADDINYTILKENGQCLVTKKLEP 552
++I P++ PYG P D+ T + G+ ++ + L+P
Sbjct: 114 VRIQPLKTPYGLPAEQDMADTFINSKGELIIRRLLQP 150
>UniRef50_UPI0000585270 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 148
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/107 (33%), Positives = 63/107 (58%)
Frame = +1
Query: 262 KDPEITPSKLFRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHL 441
++ E P L V RI+S K PYW++ I+ +L++ + + + KN P +N+ L +++HL
Sbjct: 36 QEGEKEPHLLHAVWRIRSLKRRPYWERDIMKQLRLEDTRKPVIHKNTPLVNSLLTRVRHL 95
Query: 442 IKITPIEFPYGEPTADDINYTILKENGQCLVTKKLEPEFGQIQALEE 582
I+I P+ YG P D T+L+ NG +V +K+EP + A+ +
Sbjct: 96 IRIKPVNPVYGMPDG-DYEETLLQWNGDFIVKRKIEPHGEEKTAISD 141
>UniRef50_Q9UA63 Cluster: Putative uncharacterized protein W04B5.4;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein W04B5.4 - Caenorhabditis elegans
Length = 197
Score = 64.9 bits (151), Expect = 2e-09
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +1
Query: 283 SKLFRVERIKSSKHFPYWQKRILDEL--KIHEETRVTVVKNIPEINAKLWKIKHLIKITP 456
SKL+ + + P W K+ ++ L + R+ V +N IN +LWKIKHLI++ P
Sbjct: 57 SKLWMAWLYRDTSAEPKWTKKHVENLFGADFKVGRMEVFRNTELINTELWKIKHLIELRP 116
Query: 457 IEFPYG-EPTADDINYTILKENGQCLV 534
+EF G EPT DDI T L NGQC V
Sbjct: 117 VEFKNGVEPTEDDIFSTSLAPNGQCEV 143
>UniRef50_Q5DDM7 Cluster: SJCHGC05377 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05377 protein - Schistosoma
japonicum (Blood fluke)
Length = 290
Score = 53.6 bits (123), Expect = 5e-06
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Frame = +1
Query: 253 PDYKDPEITPSKLFRVERIKSSKHFPYWQKRILDELKIHEETRV---TVVKNIPEINAKL 423
P ++ P L V R+K K ++++ IL++ + +T+ VVKNIP +N L
Sbjct: 64 PPAENQSDKPPLLHMVCRLKPLKGIIHYERAILEKYGLGRDTKNHSWVVVKNIPSVNRDL 123
Query: 424 WKIKHLIKITPIEFPYGEPTADDI 495
++IKHL++I P+ F G P+ D+
Sbjct: 124 YEIKHLVRIQPVIFKNGLPSESDL 147
>UniRef50_A7STG6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 82
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/62 (38%), Positives = 35/62 (56%)
Frame = +1
Query: 277 TPSKLFRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKITP 456
T KL V I+S P+W+KR L L + + + V KN P +N L +KHL+ +TP
Sbjct: 19 TLHKLHAVTLIRSGIRQPWWEKRTLKVLGLTKLHKTVVHKNTPAVNGLLRSVKHLVDVTP 78
Query: 457 IE 462
I+
Sbjct: 79 IK 80
>UniRef50_UPI0000DC0A88 Cluster: UPI0000DC0A88 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0A88 UniRef100 entry -
Rattus norvegicus
Length = 149
Score = 42.7 bits (96), Expect = 0.009
Identities = 24/64 (37%), Positives = 37/64 (57%)
Frame = +1
Query: 265 DPEITPSKLFRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLI 444
DP P KL V RI S K +W+K + EL++ + + K+I ++NAK +KHL+
Sbjct: 78 DPH-NPHKLHIVTRI-SIKRCLFWEKHTIKELRLQKAHSLQSHKDIQQVNAKPEVVKHLM 135
Query: 445 KITP 456
+I P
Sbjct: 136 RIQP 139
>UniRef50_Q4CV16 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 236
Score = 39.9 bits (89), Expect = 0.063
Identities = 13/44 (29%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = +1
Query: 334 WQ-KRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKITPIE 462
W+ R+L EL++ + + T+V +IP++ +LW+++H+++I ++
Sbjct: 93 WEINRMLRELRLEFKGQTTIVPDIPQVRKQLWRVRHVVRIDMLD 136
>UniRef50_Q9U0Z7 Cluster: Hypothetical transmembrane protein
L5683.03; n=4; Trypanosomatidae|Rep: Hypothetical
transmembrane protein L5683.03 - Leishmania major
Length = 409
Score = 37.9 bits (84), Expect = 0.25
Identities = 15/58 (25%), Positives = 34/58 (58%)
Frame = +1
Query: 289 LFRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKITPIE 462
+F V I F + R+L EL++ + TVV +IP + ++W+++H++++ ++
Sbjct: 257 VFIVTCIDHPFKFSWEVNRMLRELRLEFMGQTTVVPDIPPVRKRIWRVRHVVRVDQLD 314
>UniRef50_Q9X1J1 Cluster: 50S ribosomal protein L30; n=19;
Bacteria|Rep: 50S ribosomal protein L30 - Thermotoga
maritima
Length = 67
Score = 36.7 bits (81), Expect = 0.59
Identities = 17/61 (27%), Positives = 36/61 (59%)
Frame = +1
Query: 280 PSKLFRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKITPI 459
P KL +++ +KS + + QK + L + + +V + ++P+I + K+KHL+++ I
Sbjct: 2 PKKL-KIKLVKSPIGYSWDQKDTVKRLGLKKLNQVVIKDDLPQIRGMIRKVKHLVEVEEI 60
Query: 460 E 462
E
Sbjct: 61 E 61
>UniRef50_Q74MH0 Cluster: NEQ025; n=1; Nanoarchaeum equitans|Rep:
NEQ025 - Nanoarchaeum equitans
Length = 257
Score = 35.5 bits (78), Expect = 1.4
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 271 EITPSKLFRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIK 447
E+ P ++ K HF YW K L+ KI E VT +K++ E+ +W + + IK
Sbjct: 46 ELNPERIIISVNKKFENHFRYWLK-TLENDKI--ELIVTPIKDVKELKGAIWDLNYSIK 101
>UniRef50_A0B5V7 Cluster: Radical SAM domain protein; n=1;
Methanosaeta thermophila PT|Rep: Radical SAM domain
protein - Methanosaeta thermophila (strain DSM 6194 /
PT) (Methanothrixthermophila (strain DSM 6194 / PT))
Length = 358
Score = 35.1 bits (77), Expect = 1.8
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +1
Query: 346 ILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKITPIEFPYGEPTADDINYTILKEN-G 522
IL+ LK+H RV + I I A K+ + IE+ A+D+ T+++EN
Sbjct: 265 ILENLKMHALARVALHPYITNIQASWVKLGREVAGAAIEWG-----ANDLGGTLMEENIS 319
Query: 523 QCLVTKKLEPEFGQIQALEEFDSDRKKMNSTTIKRDTRHR 642
+C +K+ GQ + +EF KK +RDT +R
Sbjct: 320 RCAGSKE-----GQYMSPDEFQDLIKKHGRVPTQRDTLYR 354
>UniRef50_Q6N4V1 Cluster: 50S ribosomal protein L30; n=31;
Alphaproteobacteria|Rep: 50S ribosomal protein L30 -
Rhodopseudomonas palustris
Length = 64
Score = 34.7 bits (76), Expect = 2.4
Identities = 15/56 (26%), Positives = 34/56 (60%)
Frame = +1
Query: 283 SKLFRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKI 450
+ + +VE+I S + Q+ L LK+++ RV +++ PE+ + K++HL+++
Sbjct: 5 ANMIKVEQIGSPIRRHHSQRETLIGLKLNKIGRVAELQDTPEVRGMIGKVQHLVRV 60
>UniRef50_A0RUE6 Cluster: Ribosomal protein L30/L7E; n=2;
Thermoprotei|Rep: Ribosomal protein L30/L7E -
Cenarchaeum symbiosum
Length = 155
Score = 33.9 bits (74), Expect = 4.1
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 298 VERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLI 444
V RIK P+W + L L++ ++ R T++++ L K+KH +
Sbjct: 7 VVRIKGQADVPHWAETTLKLLRLEKKHRATIIQSKENTRGMLDKVKHYV 55
>UniRef50_UPI000049A390 Cluster: hypothetical protein 14.t00038; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: hypothetical protein
14.t00038 - Entamoeba histolytica HM-1:IMSS
Length = 1194
Score = 33.5 bits (73), Expect = 5.5
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +1
Query: 340 KRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKITPIEFPYGEPTADDINYTILKE 516
K++ +E I + + + N N WK K L+ +T +E P GE T +++ TI+KE
Sbjct: 1058 KQLKNENTIVSDCLLDIQYNGYYDNLSYWKQKILLLLTQMETPVGEYTQNELVNTIIKE 1116
>UniRef50_Q23QK5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1413
Score = 33.1 bits (72), Expect = 7.2
Identities = 24/111 (21%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +2
Query: 281 HQSCSE*SELNQANIFHTG----KKGYWMN*KFMRRPESLWLKIYQKSMLNYGKSSI*LK 448
+QS E N+ N+F+ +K + + + S LK++Q S++NY K+ I ++
Sbjct: 681 NQSIQSFIETNEENVFNKNVNQDQKPKFQTQNYQPQSFSSALKLFQNSIINYSKNQISIQ 740
Query: 449 LHQLNFLMENQLQMI*TTQSLKKMVNAWLQKNWNRNSARSRP*KNLIVIEK 601
+LN+ + T ++ + +++ N + + P KN+ ++E+
Sbjct: 741 DQELNYYSFPTSRQDFTIKNYDIPTQIYEKESERFNESLTFPQKNVSILEE 791
>UniRef50_Q237P5 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 2771
Score = 33.1 bits (72), Expect = 7.2
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = -2
Query: 420 FSIDFWYIFNHSDSGLLMNFQFIQYPFLPVWKMFA*FNSLYSE 292
++IDFWY F +S+S ++N QYP + F F ++ +E
Sbjct: 1855 YAIDFWYGFFYSNSSYVVNSNSTQYPIQLSFTGFWPFQNMQTE 1897
>UniRef50_Q0YL11 Cluster: Radical SAM; n=1; Geobacter sp.
FRC-32|Rep: Radical SAM - Geobacter sp. FRC-32
Length = 363
Score = 32.7 bits (71), Expect = 9.5
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
Frame = +1
Query: 196 YKHPGGIRYPGGITYYPRFPDYKDPEITPSKLFRVERIKSSKHFPYWQ--KRILDELKIH 369
Y G YP G+ F Y++PE L R + YWQ KRI E+K+H
Sbjct: 280 YSSGDGKLYPCGM-----FFSYREPEFCLGDLTRQSFKAIIESDAYWQTMKRIETEIKVH 334
Query: 370 EETRVTVVKNIPEINAKLWKIKH 438
EE + N IN L+ +K+
Sbjct: 335 EECYASCKTN--AINEFLYTLKN 355
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,920,352
Number of Sequences: 1657284
Number of extensions: 15681081
Number of successful extensions: 35450
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 34219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35431
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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