Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_D04
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.63 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.5  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   5.9  

>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +1

Query: 169 LVSIIRSKG--YKHPGGIRYPGGITYYPRFPDYKDPEITPSKLFRVERIKSSKHFPYWQ 339
           LVS +R KG  ++    I  P     YP   +  D   TP +LF  ER +  K++P ++
Sbjct: 16  LVSSLRKKGRFWECLAPIPQPPA---YPIIGNLFDIMRTPEQLFLAERERGLKYYPIYK 71


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
 Frame = -2

Query: 537  CNQ-ALTIFFKDCVVYIICSWFSIRKFN------WCNFNQMLDFP 424
            C++ A   +  DC  Y+ C W     FN      W N   + D+P
Sbjct: 1279 CSENAFAAYPGDCTRYLHCLWGKYEVFNCAPGLHWDNNKNICDWP 1323


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +1

Query: 169 LVSIIRSKG--YKHPGGIRYPGGITYYPRFPDYKDPEITPSKLFRVERIKSSKHFPYWQ 339
           LVS +R KG  ++    I  P     YP   +  D   TP ++F  +R +  K++P ++
Sbjct: 16  LVSSLRKKGRFWECLAPIPQPPA---YPIIGNLFDIMRTPEQMFLADRERGLKYYPIYK 71


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 316 SKHFPYWQKR 345
           SKH+ YWQ +
Sbjct: 18  SKHYSYWQSK 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,350
Number of Sequences: 336
Number of extensions: 4526
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)