Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_D03
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.87 
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    24   1.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    24   1.2  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   3.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.6  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   4.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   6.1  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   6.1  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 110 LYLILLFTWVEYLWEQYLSLRQLKIY 187
           LY++LL  +  YLW   + +R  + Y
Sbjct: 122 LYMVLLLLFDAYLWISSVGVRMFQYY 147


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -1

Query: 541 KESYSLLIKSMSFLKNKHTINGKWFVNNKVEQCNK 437
           K S +  +  ++ LKN   +NG W    K   C K
Sbjct: 2   KHSLATYLLFLALLKNISALNGAWRWECKSNYCQK 36


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/45 (20%), Positives = 23/45 (51%)
 Frame = -1

Query: 517 KSMSFLKNKHTINGKWFVNNKVEQCNKCHKNATYNYLSIWRDVEH 383
           +S+ F+ ++  I  ++ ++      N  ++NAT     +W+ + H
Sbjct: 193 RSLQFVDSEGNILEEFVLSRAGGLVNSLYQNATRKVCGVWKRIPH 237


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 673 NTPTVNIISNSHSPTV*QICTST 741
           N P V ++ N ++ TV  IC +T
Sbjct: 196 NDPLVALVVNENNTTVNNICQAT 218



 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 482 YGVFVLEERHGFNKQTVR 535
           YGV+  E   GF K+TVR
Sbjct: 98  YGVYSCEGCKGFFKRTVR 115


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 394 DVEHCSNLFTFPPCN 350
           D+E   +LF F PCN
Sbjct: 53  DLEPLPSLFPFSPCN 67



 Score = 21.4 bits (43), Expect = 8.1
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -1

Query: 535 SYSLLIKSMSFLKNKHTINGKWFVNNKVEQCNKCHKN 425
           SY  +  S S  + +H+IN     N K   C  C K+
Sbjct: 222 SYKSVPMSFSSPRRRHSINLLEEDNQKPNVCRICGKS 258


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/46 (23%), Positives = 23/46 (50%)
 Frame = -2

Query: 465 LTIKLNNVINVIKMQLIIISLSGEMLNIAPICSLFLHAT*IHLLYN 328
           L + L N   ++  +LI +    + + +  IC+L  H + +  L+N
Sbjct: 824 LVLMLKNRYIILNGRLIKMETKAQSVALGKICTLHHHLSKLIRLFN 869


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
 Frame = +2

Query: 437 FITL-FNFIVNKPFTIYGVFVLEERHGFNKQTVRFFIKD--QIKSLFLSLVITL 589
           +IT+   FI+     IY ++ + E  GF      + + D     + F SL I +
Sbjct: 7   YITISMAFIIFVSLEIYHIYTVVEESGFENFVKTYLVSDFENYVTFFCSLFIVV 60


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +2

Query: 161 LSLRQLKIYKTNNTIPEDLKEMLNEDLFKKARLYGIDKAQFKIVK 295
           +S    K Y    T      + L+ED F   RL+G+  ++ +I++
Sbjct: 101 VSNNNFKTYSNVTTCSYYSLDDLSEDTFYDIRLWGVSFSKKQILR 145


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -2

Query: 318 VSIVLYSSLTILN 280
           + I+LYSSL +LN
Sbjct: 217 IMIILYSSLMVLN 229


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,366
Number of Sequences: 336
Number of extensions: 3913
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)