Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_D01
(767 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36) 37 0.016
SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45) 37 0.021
SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.048
SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0) 35 0.063
SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30) 35 0.083
SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30) 34 0.11
SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36) 33 0.25
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_9607| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_48929| Best HMM Match : BTB (HMM E-Value=1.4e-15) 33 0.34
SB_38111| Best HMM Match : Kelch_1 (HMM E-Value=0) 32 0.44
SB_33742| Best HMM Match : Kelch_1 (HMM E-Value=0) 32 0.44
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 32 0.59
SB_3363| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24) 31 1.0
SB_17029| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13) 31 1.0
SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_40853| Best HMM Match : BTB (HMM E-Value=1.4e-17) 30 1.8
SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_37879| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18) 29 4.1
SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_39376| Best HMM Match : Alpha-amylase_C (HMM E-Value=0.49) 29 5.5
SB_32609| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 5.5
SB_27990| Best HMM Match : DUF229 (HMM E-Value=6.5e-07) 28 7.2
SB_41424| Best HMM Match : TBCC (HMM E-Value=0.57) 28 9.5
SB_37204| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-25) 28 9.5
SB_33437| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_30967| Best HMM Match : Remorin_N (HMM E-Value=4.9) 28 9.5
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_9355| Best HMM Match : rve (HMM E-Value=4.8e-35) 28 9.5
>SB_13953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +1
Query: 637 KNLEDADFTLVSEDGEKFXV--HKAILAAHSDVFKAMFRGR 753
+ D +F++++ DGEK + HK +LA S VF+AMF G+
Sbjct: 22 RTFSDVEFSVMNADGEKVSIPAHKYVLATSSPVFEAMFFGK 62
>SB_39453| Best HMM Match : BTB (HMM E-Value=3.1e-36)
Length = 398
Score = 37.1 bits (82), Expect = 0.016
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 631 LLKNLEDADFTLVSEDGEKFXVHKAILAAHSDVFKAMF 744
LL N +D L++ G +F HKAILAA S VF AMF
Sbjct: 216 LLDNATFSDTVLIA-GGREFKAHKAILAARSPVFSAMF 252
>SB_19151| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 37.1 bits (82), Expect = 0.016
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 646 EDADFTLVSEDGEKFXVHKAILAAHSDVFKAMFRG 750
E D TL +EDG VH+ +LAA S F+AMF G
Sbjct: 80 ELCDVTLETEDGLSIAVHRNVLAAVSPYFRAMFTG 114
>SB_36561| Best HMM Match : BACK (HMM E-Value=1.4013e-45)
Length = 554
Score = 36.7 bits (81), Expect = 0.021
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1
Query: 655 DFTLVSEDGEKFXVHKAILAAHSDVFKAMF 744
D L++EDG++ HK +L+A S+ F+AMF
Sbjct: 27 DVVLMTEDGQEIDAHKLVLSASSEYFRAMF 56
>SB_2806| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 600
Score = 35.5 bits (78), Expect = 0.048
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +1
Query: 610 TVHTFEGLLKNLEDADFTLVSEDGEKFXVHKAILAAHSDVFKAMFRG 750
T FE KN + D +V D ++ HK +LA+ SD F AMF G
Sbjct: 20 TFMRFEDFRKNSQLCDIKIVIGD-KRIRAHKLVLASFSDYFSAMFTG 65
>SB_5771| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 595
Score = 35.1 bits (77), Expect = 0.063
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = +1
Query: 676 DGEKFXVHKAILAAHSDVFKAMFRG 750
DG +F HK ILAA SD F AMF G
Sbjct: 41 DGHEFPAHKNILAASSDYFMAMFSG 65
>SB_8489| Best HMM Match : Kelch_1 (HMM E-Value=1.2e-30)
Length = 619
Score = 34.7 bits (76), Expect = 0.083
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = +1
Query: 556 IAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFXVHKAILAAHSDVFK 735
+A S + NV L + T + + + E D TL D + F HK +LAA+S F+
Sbjct: 43 MADSSKSVAEENVLHPLEFLQTLDKMRVSGEGCDVTLKVTD-QSFPGHKLVLAANSTYFR 101
Query: 736 AMFRGRD 756
AMF R+
Sbjct: 102 AMFGLRE 108
>SB_12977| Best HMM Match : BTB (HMM E-Value=1.7e-30)
Length = 176
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 556 IAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFXVHKAILAAHSDVFK 735
+A S + NV L + T + + + E D TL D + F HK +LAA+S F+
Sbjct: 1 MADSSKSVAEENVLHPLEFLQTLDKMRVSGEGCDVTLKVTD-QSFPGHKLVLAANSTYFR 59
Query: 736 AMF 744
AMF
Sbjct: 60 AMF 62
>SB_45623| Best HMM Match : BTB (HMM E-Value=1.4e-36)
Length = 574
Score = 33.1 bits (72), Expect = 0.25
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Frame = +1
Query: 568 SPKILNLNVFDKLLTVHTFEGLL-KNLED-------ADFTLVSEDGEKFXVHKAILAAHS 723
+PK L+ N L+ EGLL K+L D D L+ E+ E+F HK ILAA+S
Sbjct: 10 APKSLSKNTHPTLM-----EGLLLKSLNDQRQSKILCDVVLLVEN-EEFSAHKGILAANS 63
Query: 724 DVFKAMF 744
F AMF
Sbjct: 64 HYFMAMF 70
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 655 DFTLVSEDGEKFXVHKAILAAHSDVFKAMF 744
D TL + + F HK +LAA SD FKA+F
Sbjct: 30 DITLKTTSEDIFPAHKIVLAAKSDYFKALF 59
>SB_9607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 33.1 bits (72), Expect = 0.25
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +1
Query: 637 KNLEDADFTLVSEDGEKFXVHKAILAAHSDVFKAMF 744
K +D+D L E+ E F VHK IL S VFKAMF
Sbjct: 23 KPWDDSDIILEVEEQE-FYVHKMILKMASPVFKAMF 57
>SB_48929| Best HMM Match : BTB (HMM E-Value=1.4e-15)
Length = 239
Score = 32.7 bits (71), Expect = 0.34
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 646 EDADFTLVSEDGEKFXVHKAILAAHSDVFKAMF 744
+++D LV E+ E F VHK IL S VFKAMF
Sbjct: 16 DESDVILVVEEQE-FHVHKFILKMASPVFKAMF 47
>SB_38111| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 548
Score = 32.3 bits (70), Expect = 0.44
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +1
Query: 547 YIAIAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFXVHKAILAAHSD 726
Y+A P PKI N L+ K+ + T+V +G+ F H+ +LAA S
Sbjct: 17 YMAFISPKPKIPEANYCVALM--QCLNDFRKHNVLCEVTIVV-NGKPFYAHRNVLAAASP 73
Query: 727 VFKAMF 744
F+AMF
Sbjct: 74 YFRAMF 79
>SB_33742| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 570
Score = 32.3 bits (70), Expect = 0.44
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +1
Query: 547 YIAIAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFXVHKAILAAHSD 726
Y+A P PKI N L+ K+ + T+V +G+ F H+ +LAA S
Sbjct: 17 YMAFISPKPKIPEANYCVALM--QCLNDFRKHNVLCEVTIVV-NGKPFYAHRNVLAAASP 73
Query: 727 VFKAMF 744
F+AMF
Sbjct: 74 YFRAMF 79
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 31.9 bits (69), Expect = 0.59
Identities = 19/39 (48%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 637 KNLEDADFTLVSEDGEKFXV-HKAILAAHSDVFKAMFRG 750
K L D F + E G+ F HK ILA S VF AMF G
Sbjct: 2758 KLLSDVSFRVGKEQGKYFIPGHKLILAISSPVFYAMFYG 2796
>SB_3363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 31.5 bits (68), Expect = 0.77
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 622 FEGLLKNLEDADFTLVSE--DGEKFXVHKAILAAHSDVFKAMF 744
+E L + LE DF V G++F H+AIL S F +MF
Sbjct: 77 YEFLRRTLESGDFADVCFVIHGQRFCAHRAILTTRSSYFASMF 119
>SB_55494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 664
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = +1
Query: 613 VHTFEGLLKNLEDADFTLVSEDGEKFXVHKAILAAHSDVFKAM 741
++T + N E +D T V E GE F HK ILA S FK M
Sbjct: 477 IYTGADYVNNQEMSDVTFVVE-GEPFYGHKIILATASPRFKQM 518
>SB_35938| Best HMM Match : BTB (HMM E-Value=8.5e-24)
Length = 467
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 649 DADFTLVSEDGE--KFXVHKAILAAHSDVFKAMFRG 750
D +F + DG +F HK +L+ S VF+AMF G
Sbjct: 28 DIEFLITKADGTEVRFPAHKFVLSVSSPVFEAMFFG 63
>SB_17029| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 434
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 649 DADFTLVSEDGE--KFXVHKAILAAHSDVFKAMFRG 750
D +F +V +GE K HK ILA S VF++ F G
Sbjct: 25 DIEFAVVKSNGELDKIPAHKFILAIGSPVFESQFHG 60
>SB_32554| Best HMM Match : BTB (HMM E-Value=2e-13)
Length = 133
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +1
Query: 667 VSEDGEKFXV--HKAILAAHSDVFKAMFRGR 753
++ DGEK + HK +LA S VF+AMF G+
Sbjct: 1 MNADGEKVSIPAHKYVLATSSPVFEAMFFGK 31
>SB_22964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +1
Query: 631 LLKNLEDADFTLVSEDGEKFXVHKAILAAHSDVFKAMFRG 750
L ++ E D T + E KF H+ ILAA S+ F+A+ G
Sbjct: 25 LYQSRELTDVTFIVEK-TKFTAHRVILAARSEYFRALLFG 63
>SB_40853| Best HMM Match : BTB (HMM E-Value=1.4e-17)
Length = 259
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 652 ADFTLVSEDGEKFXVHKAILAAHSDVFKAMFRGRDN 759
+D LV E+ + F VHK+ L+ S VF+ MFR R++
Sbjct: 17 SDAVLVVEE-KHFNVHKSTLSMWSPVFEKMFRERND 51
>SB_3410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1256
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 280 DIFLLHIFIQRYCEGSFSISISYGSEMEIDKKQKIVRLTKSLKEYKFENTREN 438
DIFLLHI I+R C +FS+ + +I K + + + E+ REN
Sbjct: 281 DIFLLHINIERRCVNNFSLVTFFPDAKDIAVKIIDIETQRKIGEW-LPLVREN 332
>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 268 EQVGDIFLLHIFIQRYCEGSFSISISYGSEMEIDK--KQKIVRLTKSLKEYKFENTRENS 441
E V + F L +I++ G+ S S S + +K + ++R TK+ + + ++NS
Sbjct: 332 EDVNEEFDLEKYIRKLERGTSS-SEDDASSVTSEKLINRAVLRATKNFRRANVDTVKQNS 390
Query: 442 NSTQIEGEPEL 474
+S + EPE+
Sbjct: 391 DSESSDSEPEV 401
>SB_37879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 677
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 508 SNLDVGFMKNKSLYIAIAFPSPKILNLNVFDKLLTVHTFEGLL 636
++L G + S+ +AIAF + LN+F L + T G+L
Sbjct: 460 ASLSAGTFSSMSISVAIAFVVMLLTTLNIFISLYAIITIVGIL 502
>SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18)
Length = 398
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 94 PKEENRDIVLGHRSCKTCDAKWLCIENVYQKFHRPNYY--DIGGTYYLEDLPDFWFTSKT 267
P+ R +V GH+ C+ C ++WL +P D G+ L+ +P+ F +T
Sbjct: 271 PETPTRLLVCGHKYCEPCLSRWLENNTTCPICRKPTSRNDDELGSQTLDFMPELAFRLRT 330
Query: 268 EQV 276
Q+
Sbjct: 331 LQM 333
>SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 637 KNLEDADFTLVSEDGEKFXVHKAILAAHSDVFKAMF 744
+N ++ L+ D E+ HK +LAA S F+AMF
Sbjct: 27 RNSKELCDVLLCVDDEEIPSHKLVLAASSPYFRAMF 62
>SB_39376| Best HMM Match : Alpha-amylase_C (HMM E-Value=0.49)
Length = 679
Score = 28.7 bits (61), Expect = 5.5
Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 3/127 (2%)
Frame = +1
Query: 349 GSEMEIDKKQKIVRLTKSLKEYKFENTRENSNSTQIEGEPELGCLEYVSTYNFSNLDVGF 528
G +E+D K+ + + + N +EN+ EGE + Y + + F
Sbjct: 7 GPPLEVDGIDKLDLMEEEKQHTLRANGQENNEGNNAEGEDKDNTPPLKPYYFWDPYEAAF 66
Query: 529 MKNKSLYIAIAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDA---DFTLVSEDGEKFXVH 699
M + Y + +I F L +++ +++N +A D + + G VH
Sbjct: 67 MATEPAYTVDKY--ARIYFPVTFAVLNSIYWIVDIIRNAVNAGEGDAVIFTGSGCTAAVH 124
Query: 700 KAILAAH 720
K I A H
Sbjct: 125 KLIHALH 131
>SB_32609| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1741
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +1
Query: 349 GSEMEIDKK-QKIVRLTKSLKEYKFENTRENSNST 450
GSE +K K VRL +L E + ENT+ + N++
Sbjct: 524 GSEQNCSEKVSKTVRLNNTLVEKRIENTKHDKNAS 558
>SB_27990| Best HMM Match : DUF229 (HMM E-Value=6.5e-07)
Length = 887
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +1
Query: 250 WFTSKTEQVGDIFLLHIFIQRYCEGSFSISISYGSEMEIDKKQKIVRLTKSLKEYKFENT 429
W+ + T+QVG LHI + + YG+ +IDK +++ K +Y F+
Sbjct: 447 WYDAFTDQVG---ALHIDDLGLMPSACEVYQQYGTTNQIDKPRRVCFGGKVYADYYFDYA 503
Query: 430 RE 435
R+
Sbjct: 504 RK 505
>SB_41424| Best HMM Match : TBCC (HMM E-Value=0.57)
Length = 285
Score = 27.9 bits (59), Expect = 9.5
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +1
Query: 274 VGDIFLLHIFIQRYCEGSFSISISYGSEMEIDKKQKIVRLTKSLKEYKFENTRENSNSTQ 453
VG + H+ + CE S +++ SE+ +D K+V + + T+E+S +TQ
Sbjct: 170 VGPNVVYHVKLAHNCESS---AVAETSEIVLDIPDKLVYASFAANSGSLAVTKESSPATQ 226
Query: 454 IEGEPELGCLEYVSTYNFSNLDVGFMKNKSL 546
++ G + + +F N+ F +SL
Sbjct: 227 LKF--SAGLMNFTDVVDF-NITFTFDSARSL 254
>SB_37204| Best HMM Match : zf-C2H2 (HMM E-Value=3.5e-25)
Length = 455
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +1
Query: 37 VNEKMEQLNNEAQTSSSGIPKEE-----NRDIVLGHRSCKTCDAKWLCIENV 177
VN+K EQ NN+ + + I K+E N DIV+ H + + K+ +N+
Sbjct: 27 VNKKQEQQNNDVTSMAEIIIKQEKDECPNEDIVIQHIGSEELNVKFEKSDNL 78
>SB_33437| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 200
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Frame = +1
Query: 325 SFSISISYGSEMEIDKKQKIVRLTKSLKEYKFENTRENSNSTQIEGEP-ELGCLEYVSTY 501
S S S+ + E + V EY + R +ST EG P L +S Y
Sbjct: 96 SLSKSVKHSPHCESVSESSTVHTVSHHYEYTWLRNRGVDSSTLFEGTPLSLHADITISLY 155
Query: 502 N--------FSNLDVGFMKNKSLYI 552
F N D+GF+K SL++
Sbjct: 156 KDAIEKVPLFQNKDIGFVKMLSLHV 180
>SB_30967| Best HMM Match : Remorin_N (HMM E-Value=4.9)
Length = 263
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 67 EAQTSSSGIPKEE-NRDIVLGHRSC-KTCDAKWLCIENVYQKFHRPNYYDIGGTYYL 231
E +T + P++ +R L R C + + W CIEN Y ++ +YY + ++L
Sbjct: 170 ELRTEHASFPRDALSRSTSLFTRECILSYTSSWNCIENKYAQY-SGSYYKLPSLFWL 225
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 676 DGEKFXVHKAILAAHSDVFKAMFRGR 753
DG+ HK +L A DV AM GR
Sbjct: 421 DGQVVFAHKVVLMARCDVMAAMLGGR 446
>SB_9355| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1520
Score = 27.9 bits (59), Expect = 9.5
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 8/116 (6%)
Frame = +1
Query: 373 KQKIVRLTKSLKEYK--FENTRENSNSTQIEGEPELGCL------EYVSTYNFSNLDVGF 528
K+K + K LK+ K E T+ NSN +G+P + L E Y + G
Sbjct: 453 KKKGHIVAKCLKKAKKSSETTKPNSNHHPKQGKPAIHVLDTDKEIEDEDIYPLFAVSQGN 512
Query: 529 MKNKSLYIAIAFPSPKILNLNVFDKLLTVHTFEGLLKNLEDADFTLVSEDGEKFXV 696
+N S S ++ ++FD+L + EG NL+D TL + GE V
Sbjct: 513 RQNPSNGTDTG-ASLSVIGEDIFDQLKNI---EGSSLNLQDTKLTLKTYTGETIPV 564
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,877,206
Number of Sequences: 59808
Number of extensions: 504351
Number of successful extensions: 993
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2083999566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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