Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_C22
         (806 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_04_0016 + 16461542-16461566,16462701-16462732,16463015-164631...    79   5e-15
07_03_1260 - 25260872-25261101,25261199-25261312,25261473-252615...    77   2e-14
07_03_1580 + 27888275-27888360,27888755-27888871,27888964-278890...    75   9e-14
07_01_0243 - 1783903-1784658                                           29   4.4  
01_01_0538 - 3938389-3939727,3939828-3940203,3940299-3940516,394...    29   4.4  
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492...    29   5.8  
01_06_1261 - 35826513-35828941,35829201-35829294                       29   5.8  

>03_04_0016 +
           16461542-16461566,16462701-16462732,16463015-16463100,
           16463189-16463305,16463399-16463474,16463695-16463818,
           16464482-16464595,16464700-16464947
          Length = 273

 Score = 78.6 bits (185), Expect = 5e-15
 Identities = 37/63 (58%), Positives = 46/63 (73%)
 Frame = +1

Query: 613 RLAAYNAKKAKKPVLIAKSNIILDVKPWDDXTDMAALEQAVRSIXTDGLLWGAAKLXPLA 792
           R AA  A   KK     KS+++LDVKPWDD TDMA LE+AVR++  +GLLWGA+KL P+ 
Sbjct: 141 RAAAVKASGKKKES--GKSSVLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLVPVG 198

Query: 793 YGI 801
           YGI
Sbjct: 199 YGI 201


>07_03_1260 -
           25260872-25261101,25261199-25261312,25261473-25261596,
           25261755-25261839,25261917-25262033,25262122-25262207
          Length = 251

 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 36/63 (57%), Positives = 45/63 (71%)
 Frame = +1

Query: 613 RLAAYNAKKAKKPVLIAKSNIILDVKPWDDXTDMAALEQAVRSIXTDGLLWGAAKLXPLA 792
           R AA  A   KK     KS+++LDVKPWDD TDM  LE+AVR++  +GLLWGA+KL P+ 
Sbjct: 125 RAAAVKASGKKKES--GKSSVLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVPVG 182

Query: 793 YGI 801
           YGI
Sbjct: 183 YGI 185


>07_03_1580 +
           27888275-27888360,27888755-27888871,27888964-27889045,
           27889710-27889821,27889958-27890071,27890163-27890326
          Length = 224

 Score = 74.5 bits (175), Expect = 9e-14
 Identities = 32/57 (56%), Positives = 42/57 (73%)
 Frame = +1

Query: 631 AKKAKKPVLIAKSNIILDVKPWDDXTDMAALEQAVRSIXTDGLLWGAAKLXPLAYGI 801
           +K + K     KS+++LDVKPWDD TDM  LE+AVRS+  +GL WGA+KL P+ YGI
Sbjct: 124 SKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYGI 180


>07_01_0243 - 1783903-1784658
          Length = 251

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 14/40 (35%), Positives = 26/40 (65%)
 Frame = +2

Query: 437 ACKSVLKPWNHPAVSPLIVFNQKNLQQLLLIRMTKMMMLI 556
           +C S++ P   P + PL+  +Q +L++LLL   + MM+L+
Sbjct: 59  SCPSLVPP---PRLLPLVPLHQSHLRRLLLSLTSSMMVLV 95


>01_01_0538 -
           3938389-3939727,3939828-3940203,3940299-3940516,
           3940607-3940769,3940866-3941100,3941186-3941353
          Length = 832

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 19/62 (30%), Positives = 31/62 (50%)
 Frame = +1

Query: 271 VAKARQHIKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVR 450
           +A AR  ++   E     A L     TEL  +   L+ +N++ + AI D+  L+I  + R
Sbjct: 305 IATARDSLRQREEAKKKQAEL-----TELENEATELKQKNEEERVAIQDMEALLIKRRRR 359

Query: 451 VE 456
           VE
Sbjct: 360 VE 361


>05_07_0093 -
           27648656-27648736,27649034-27649147,27649229-27649288,
           27649464-27649687,27649799-27649886,27650326-27650532,
           27650566-27650784,27650903-27651001,27651439-27651504,
           27651654-27651737,27651829-27651888,27652041-27652325,
           27652789-27652836,27652988-27653034,27653442-27653556,
           27653958-27654032,27654227-27654298,27654944-27656124,
           27656613-27656757
          Length = 1089

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 12/47 (25%), Positives = 26/47 (55%)
 Frame = +1

Query: 286 QHIKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRN 426
           + ++  ++ M++    A   +   + ++  L NEN+ LK  IDDL++
Sbjct: 421 EKLRREMKMMEAALQGAARQSQSKADEIARLMNENEQLKSTIDDLKS 467


>01_06_1261 - 35826513-35828941,35829201-35829294
          Length = 840

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 22/63 (34%), Positives = 33/63 (52%)
 Frame = +1

Query: 277 KARQHIKNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVE 456
           K +Q  ++S E   S   LAG  + E+  KVISLE         I+ ++N    LQ R++
Sbjct: 311 KVKQKFESSSEA--SAVHLAGQVD-EIVDKVISLEIAASSQNAQINRMKNEADELQKRLD 367

Query: 457 TLE 465
           +LE
Sbjct: 368 SLE 370


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,261,777
Number of Sequences: 37544
Number of extensions: 285251
Number of successful extensions: 591
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)