Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_C20
(836 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 24 1.3
AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 24 1.3
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 24 1.7
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 24 1.7
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 24 1.7
AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein. 22 5.2
AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450 ... 22 6.9
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 6.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 6.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 6.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 6.9
AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory recept... 22 6.9
AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory recept... 22 6.9
AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450 ... 22 6.9
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 24.2 bits (50), Expect = 1.3
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -3
Query: 639 QYHKTNPLTLFYHPQHYPRCKHLWEHQS 556
QY+ NP +Y+ +++P ++ HQ+
Sbjct: 349 QYNYPNPQQQYYYNKNHPNSENYINHQN 376
>AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia
ortholog protein.
Length = 471
Score = 24.2 bits (50), Expect = 1.3
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = -3
Query: 639 QYHKTNPLTLFYHPQHYPRCKHLWEHQS 556
QY+ NP +Y+ +++P ++ HQ+
Sbjct: 297 QYNYPNPQQQYYYNKNHPNSENYINHQN 324
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 23.8 bits (49), Expect = 1.7
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = +3
Query: 444 VQHLQKVYQEISNY 485
+Q +++VYQ++SNY
Sbjct: 494 IQRMKQVYQQLSNY 507
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 638 SIIKQIH*HCF-TTPNTTPDVNTFGSINLYWVWLLEE 531
S++ ++ F T +++ D N FG+ L W++L E
Sbjct: 395 SVVTKVTCELFQATLSSSSDTNRFGTSGLAWLYLNNE 431
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 23.8 bits (49), Expect = 1.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 333 LSSQTHAQHFVNDGPWQAYTQKVNRKAL 416
L ++TH+Q G W+ +T+ + K L
Sbjct: 140 LRNKTHSQPMQGVGNWERHTKGIGAKLL 167
>AJ307577-1|CAC84070.1| 301|Tribolium castaneum dachshund protein.
Length = 301
Score = 22.2 bits (45), Expect = 5.2
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = +3
Query: 435 ERVVQHLQKVYQEISNYERPIIQEQ 509
E +V+HL+++ +E + +RP+ +Q
Sbjct: 171 EDIVKHLERLREERCDPDRPLPLDQ 195
>AY337337-2|AAP94193.1| 491|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 491
Score = 21.8 bits (44), Expect = 6.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 406 GRH*AKILIKNV*CNICKKYIKRLVIMR 489
G+ A + IK V C I KK+I V R
Sbjct: 437 GQKFAMLEIKTVLCGILKKFILEAVDTR 464
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 817 EPRFLCYISSNRRYRIKWFRPSSRNELAP 731
E R+LC + R YR+++ S AP
Sbjct: 839 EDRWLCTLLLQRGYRVEYSAASDAYTHAP 867
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 817 EPRFLCYISSNRRYRIKWFRPSSRNELAP 731
E R+LC + R YR+++ S AP
Sbjct: 839 EDRWLCTLLLQRGYRVEYSAASDAYTHAP 867
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 817 EPRFLCYISSNRRYRIKWFRPSSRNELAP 731
E R+LC + R YR+++ S AP
Sbjct: 839 EDRWLCTLLLQRGYRVEYSAASDAYTHAP 867
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.9
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -2
Query: 817 EPRFLCYISSNRRYRIKWFRPSSRNELAP 731
E R+LC + R YR+++ S AP
Sbjct: 839 EDRWLCTLLLQRGYRVEYSAASDAYTHAP 867
>AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory receptor
candidate 18 protein.
Length = 387
Score = 21.8 bits (44), Expect = 6.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 589 VVLGVVKQC*WICFMILCQLKKSSE 663
+VL +VK C CF + KS++
Sbjct: 275 IVLSIVKNCLSYCFNLYHLASKSNQ 299
>AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory receptor
candidate 17 protein.
Length = 372
Score = 21.8 bits (44), Expect = 6.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +1
Query: 589 VVLGVVKQC*WICFMILCQLKKSSE 663
+VL +VK C CF + KS++
Sbjct: 275 IVLSIVKNCLSYCFNLYHLASKSNQ 299
>AF251548-1|AAF70178.1| 491|Tribolium castaneum cytochrome P450
monooxigenase CYP4Q4 protein.
Length = 491
Score = 21.8 bits (44), Expect = 6.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 406 GRH*AKILIKNV*CNICKKYIKRLVIMR 489
G+ A + IK V C I KK+I V R
Sbjct: 437 GQKFAMLEIKTVLCGILKKFILEAVDTR 464
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,160
Number of Sequences: 336
Number of extensions: 4480
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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