Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_C20
         (836 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051691-1|AAK93115.1|  458|Drosophila melanogaster LD23856p pro...    73   6e-13
AE013599-1485|AAF58512.1|  458|Drosophila melanogaster CG8520-PA...    73   6e-13
AE014297-1625|AAF54898.1|  460|Drosophila melanogaster CG11670-P...    33   0.37 
AY069834-1|AAL39979.1|  488|Drosophila melanogaster SD07915p pro...    30   3.4  
AY069069-1|AAL39214.1|  245|Drosophila melanogaster GH08782p pro...    30   4.5  
AE014134-317|AAF51324.1|  245|Drosophila melanogaster CG10908-PA...    30   4.5  
AE013599-265|AAF57417.2|  488|Drosophila melanogaster CG3567-PA ...    29   7.9  

>AY051691-1|AAK93115.1|  458|Drosophila melanogaster LD23856p
           protein.
          Length = 458

 Score = 72.5 bits (170), Expect = 6e-13
 Identities = 48/147 (32%), Positives = 66/147 (44%), Gaps = 12/147 (8%)
 Frame = +3

Query: 351 AQHFVNDGPWQAYTQKVNRKALSKDPHQERVVQHLQKVYQEISNYERPIIQEQNIGSFFN 530
           A H     P + Y ++V+   L  D  Q + ++ L  +Y +I  Y+         G FF+
Sbjct: 24  ACHMSGLSPLKEYEKRVSSGQLMTDNRQLQTMKELDALYHKIQGYKPSYRAGGGGGGFFS 83

Query: 531 FFXXXXXXXXXXXX-----------GVYIWGSVGGGKTMLMDLFYDT-VPIKEKLRVHFN 674
                                    G+Y++GSVG GKT LMDLF+D    I  K RVHF 
Sbjct: 84  SIFGRKSSTEDDDQDDPNAGSHAPQGLYLYGSVGVGKTTLMDLFFDCCTQIHRKQRVHFT 143

Query: 675 SFMLNIHARIHELKIKSGKGASSFRDE 755
           SFM  +H RIHE K + G    +F  E
Sbjct: 144 SFMNTVHTRIHEAKQRQGPVDRAFNSE 170



 Score = 40.3 bits (90), Expect = 0.003
 Identities = 17/24 (70%), Positives = 17/24 (70%)
 Frame = +2

Query: 764 PFDPIPPVAADITQESWLICXDEF 835
           PFDP  PVA  I  ESWLIC DEF
Sbjct: 174 PFDPTKPVADLIASESWLICFDEF 197


>AE013599-1485|AAF58512.1|  458|Drosophila melanogaster CG8520-PA
           protein.
          Length = 458

 Score = 72.5 bits (170), Expect = 6e-13
 Identities = 48/147 (32%), Positives = 66/147 (44%), Gaps = 12/147 (8%)
 Frame = +3

Query: 351 AQHFVNDGPWQAYTQKVNRKALSKDPHQERVVQHLQKVYQEISNYERPIIQEQNIGSFFN 530
           A H     P + Y ++V+   L  D  Q + ++ L  +Y +I  Y+         G FF+
Sbjct: 24  ACHMSGLSPLKEYEKRVSSGQLMTDNRQLQTMKELDALYHKIQGYKPSYRAGGGGGGFFS 83

Query: 531 FFXXXXXXXXXXXX-----------GVYIWGSVGGGKTMLMDLFYDT-VPIKEKLRVHFN 674
                                    G+Y++GSVG GKT LMDLF+D    I  K RVHF 
Sbjct: 84  SIFGRKSSTEDDDQDDPNAGSHAPQGLYLYGSVGVGKTTLMDLFFDCCTQIHRKQRVHFT 143

Query: 675 SFMLNIHARIHELKIKSGKGASSFRDE 755
           SFM  +H RIHE K + G    +F  E
Sbjct: 144 SFMNTVHTRIHEAKQRQGPVDRAFNSE 170



 Score = 40.3 bits (90), Expect = 0.003
 Identities = 17/24 (70%), Positives = 17/24 (70%)
 Frame = +2

Query: 764 PFDPIPPVAADITQESWLICXDEF 835
           PFDP  PVA  I  ESWLIC DEF
Sbjct: 174 PFDPTKPVADLIASESWLICFDEF 197


>AE014297-1625|AAF54898.1|  460|Drosophila melanogaster CG11670-PA
           protein.
          Length = 460

 Score = 33.5 bits (73), Expect = 0.37
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 6/69 (8%)
 Frame = -1

Query: 614 HCFTTPNTTPDVNTFGSINLYWVWLLEEIKKRSYVLFLYYGPLIITNL------LIYFLQ 453
           HC TT  T+PD+   G I L   W L    +R  V  +Y  PL   +L      LI   +
Sbjct: 188 HCLTTHGTSPDIVKIGDIKLK-EWELNVAPQRRRVAQIYLHPLYNASLNYHDIGLIQLNR 246

Query: 452 MLHYTFLMR 426
            + YT+ +R
Sbjct: 247 PVEYTWFVR 255


>AY069834-1|AAL39979.1|  488|Drosophila melanogaster SD07915p
           protein.
          Length = 488

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 20/53 (37%), Positives = 25/53 (47%)
 Frame = +3

Query: 375 PWQAYTQKVNRKALSKDPHQERVVQHLQKVYQEISNYERPIIQEQNIGSFFNF 533
           P  AY QKV    L +  H+ R  Q LQ   Q  SN E+P+   +  G  F F
Sbjct: 237 PATAYFQKVALSQLQE--HRRRDRQPLQTFLQLYSNAEKPLTDIEIAGQAFGF 287


>AY069069-1|AAL39214.1|  245|Drosophila melanogaster GH08782p
           protein.
          Length = 245

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 249 CLLSSIFFLFETQSSFHYIIYCFFITLVS 163
           C+ S   F   + ++FH++I CFFI   S
Sbjct: 54  CMTSLFVFPISSNTAFHFLINCFFIVQYS 82


>AE014134-317|AAF51324.1|  245|Drosophila melanogaster CG10908-PA
           protein.
          Length = 245

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 249 CLLSSIFFLFETQSSFHYIIYCFFITLVS 163
           C+ S   F   + ++FH++I CFFI   S
Sbjct: 54  CMTSLFVFPISSNTAFHFLINCFFIVQYS 82


>AE013599-265|AAF57417.2|  488|Drosophila melanogaster CG3567-PA
           protein.
          Length = 488

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 20/53 (37%), Positives = 24/53 (45%)
 Frame = +3

Query: 375 PWQAYTQKVNRKALSKDPHQERVVQHLQKVYQEISNYERPIIQEQNIGSFFNF 533
           P  AY QKV    L    H+ R  Q LQ   Q  SN E+P+   +  G  F F
Sbjct: 237 PATAYFQKVALSQLQL--HRRRDRQPLQTFLQLYSNAEKPLTDIEIAGQAFGF 287


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,769,830
Number of Sequences: 53049
Number of extensions: 707367
Number of successful extensions: 1790
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1784
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3983256888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)