Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_C17
         (356 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase |S...    29   0.21 
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||...    27   0.65 
SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase family|...    27   1.1  
SPAC637.12c |mst1||histone acetyltransferase Mst1|Schizosaccharo...    25   3.5  
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb...    25   4.6  
SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase |Schizosac...    24   8.0  

>SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 678

 Score = 29.1 bits (62), Expect = 0.21
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 182 YFYIDVVIICNIFFCYFVENNIIN 253
           Y Y+ +VII  +  CYF+ NN +N
Sbjct: 4   YEYVLLVIILILSLCYFIYNNFLN 27


>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1096

 Score = 27.5 bits (58), Expect = 0.65
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +2

Query: 170  KKNVYFYIDVVI-ICNIFFCYFVENNIIN 253
            KK  Y  +   I +CNI+ C+  EN+II+
Sbjct: 1036 KKKTYVCLCTTIGLCNIYLCFANENHIIS 1064


>SPAC513.07 |||flavonol reductase/cinnamoyl-CoA reductase
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 336

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 194 DVVIICNIFFCYFVENNIINYSMLLE 271
           DV +IC+I   +FVEN   N S LL+
Sbjct: 74  DVELICHIASPFFVENVTDNKSQLLD 99


>SPAC637.12c |mst1||histone acetyltransferase
           Mst1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 463

 Score = 25.0 bits (52), Expect = 3.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +2

Query: 191 IDVVIICNIFFCYF 232
           +D+V IC+  FCY+
Sbjct: 209 VDIVYICSFCFCYY 222


>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1207

 Score = 24.6 bits (51), Expect = 4.6
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 158 IYI*KKNVYFYIDVVIICNIFFCYFVENNIINYSML 265
           +YI KKN+     +     I    +VENN++ Y+ L
Sbjct: 518 VYIVKKNLELITSIHETIRIKSAVWVENNVLLYATL 553


>SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 853

 Score = 23.8 bits (49), Expect = 8.0
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = +2

Query: 131 SKKK**RRCIYI*KKNVYFYIDVVIICNIFFCYFVENNIINYSM 262
           +KK+  ++  YI      F++  V+ C I F +++  N  N+S+
Sbjct: 56  AKKRRRKKHRYIYLAVCLFFLASVLSCAIIFRFYLHTNRENFSL 99


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 983,054
Number of Sequences: 5004
Number of extensions: 15000
Number of successful extensions: 51
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 107972554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)