Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_C17
         (356 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0326 + 33150599-33150907,33151013-33151104,33151961-331520...    27   3.3  
04_03_1012 - 21711945-21714002                                         26   7.6  

>03_06_0326 +
           33150599-33150907,33151013-33151104,33151961-33152057,
           33152585-33152656,33152750-33152812,33152905-33153045,
           33153603-33153698,33154120-33154404,33154692-33154851,
           33154947-33155089,33155688-33155861,33156386-33156652,
           33156737-33156856
          Length = 672

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 112 SAKGMEF*EKVIKTLHLYLKKKCI 183
           +AK +E+ E ++K LH+Y  K C+
Sbjct: 365 TAKVVEYWEAILKRLHIYKAKACL 388


>04_03_1012 - 21711945-21714002
          Length = 685

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = -1

Query: 266 VTWNSLLYCFQQN 228
           V+WNSL+ C++QN
Sbjct: 214 VSWNSLITCYEQN 226


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,798,834
Number of Sequences: 37544
Number of extensions: 77347
Number of successful extensions: 225
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 542368620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)