Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_C14
(839 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0661 - 30693701-30693853,30694037-30694196,30694290-306943... 295 4e-80
03_05_0899 - 28619081-28619208,28619309-28619369,28619936-286200... 283 1e-76
03_02_0210 - 6425708-6425863,6425955-6426114,6426204-6426295,642... 277 1e-74
04_04_1445 - 33658355-33658417,33658536-33658669,33659056-336591... 252 3e-67
10_08_0249 + 16172811-16172987,16174048-16174299,16174426-161745... 41 0.001
03_05_0174 + 21509202-21509690,21509696-21510133,21510176-21510643 31 0.86
03_05_0440 + 24322332-24322388,24323478-24323615,24323654-243237... 30 2.6
06_03_0954 - 26281937-26282143,26282232-26282286,26282430-262824... 29 3.5
07_03_0252 - 15846143-15848473 29 6.1
06_03_0481 - 21304802-21304920,21305063-21305131,21306140-21306557 29 6.1
05_06_0125 - 25828093-25828911,25830398-25830530,25830644-25831062 29 6.1
06_01_0485 - 3444240-3444398,3444507-3444572,3444644-3444724,344... 28 8.1
>02_05_0661 -
30693701-30693853,30694037-30694196,30694290-30694381,
30694469-30694543,30694671-30694799,30694916-30695003,
30695118-30695224,30695645-30695693,30695802-30695905,
30696108-30696147,30696838-30696911
Length = 356
Score = 295 bits (723), Expect = 4e-80
Identities = 139/260 (53%), Positives = 174/260 (66%), Gaps = 2/260 (0%)
Frame = +2
Query: 2 GRPMSQQKSNNRISCQEAYDKCKDDEPWFGIEQEYILLDSDLRXXXXXXXXXXXXXXX-Y 178
G P+ K +N + + +EPW+GIEQEY LL D+ Y
Sbjct: 99 GEPIPTNKRHNAAKIFSS-PEVASEEPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPY 157
Query: 179 YCGVGANKVFARDLVEAHYRCCLYAGVPIAGTNAEVMPSQWEFQVGPSIGVHAGDDLWVA 358
YCG+GA+K F RD+V++HY+ CLYAG+ I+G N EVMP QWEFQVGPS+G+ AGD +WVA
Sbjct: 158 YCGIGADKSFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDQVWVA 217
Query: 359 RYILHRLAEEYGVIVTFDPKPVQ-DWNGSGAHTNFSTKKMRNDNGIIEIEKAIDKLSKVH 535
RYIL R+ E GV+V+FDPKP+ DWNG+GAHTN+STK MRND G I+ AI+KL H
Sbjct: 218 RYILERITEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKSMRNDGGYEIIKSAIEKLKLRH 277
Query: 536 MKHIKVYDPRGGKDNERRLTGLHETASINDFSAGVANRGSSIRIPRSVAEDXKGYLEDRR 715
+HI Y G+ NERRLTG HETA IN FS GVANRG+S+R+ R ++ KGY EDRR
Sbjct: 278 KEHISAY----GEGNERRLTGRHETADINTFSWGVANRGASVRVGRETEQNGKGYFEDRR 333
Query: 716 PASNCDPYSVIDALMRTCIL 775
PASN DPY V + T I+
Sbjct: 334 PASNMDPYIVTSMIAETTII 353
>03_05_0899 -
28619081-28619208,28619309-28619369,28619936-28620095,
28620200-28620237,28620341-28620394,28620562-28620636,
28620744-28620872,28621172-28621259,28621340-28621446,
28621547-28621595,28621683-28621786,28622019-28622133,
28622517-28622596
Length = 395
Score = 283 bits (694), Expect = 1e-76
Identities = 137/256 (53%), Positives = 170/256 (66%), Gaps = 4/256 (1%)
Frame = +2
Query: 26 SNNRISCQEAYDK--CKDDEPWFGIEQEYILLDSDLRXXXXXXXXXXXXXXX-YYCGVGA 196
+NNR + + K +EPW+GIEQEY LL + YYC GA
Sbjct: 131 TNNRYNAARIFSHPDVKAEEPWYGIEQEYTLLQKHINWPLGWPLGGYPGPQGPYYCAAGA 190
Query: 197 NKVFARDLVEAHYRCCLYAGVPIAGTNAEVMPSQWEFQVGPSIGVHAGDDLWVARYILHR 376
+K + RD+V+AHY+ CL+AG+ I+G NAEVMP QWEFQ+GP +GV AGD +WVARYIL R
Sbjct: 191 DKSYGRDIVDAHYKACLFAGINISGINAEVMPGQWEFQIGPVVGVSAGDHVWVARYILER 250
Query: 377 LAEEYGVIVTFDPKPVQ-DWNGSGAHTNFSTKKMRNDNGIIEIEKAIDKLSKVHMKHIKV 553
+ E GV+V+FDPKP+ DWNG+GAHTN+STK MR++ G I+KAI KL H +HI
Sbjct: 251 ITEIAGVVVSFDPKPIPGDWNGAGAHTNYSTKSMRSNGGYEVIKKAIKKLGMRHREHIAA 310
Query: 554 YDPRGGKDNERRLTGLHETASINDFSAGVANRGSSIRIPRSVAEDXKGYLEDRRPASNCD 733
Y G NERRLTG HETA IN+F GVANRG+S+R+ R +D KGY EDRRPASN D
Sbjct: 311 Y----GDGNERRLTGRHETADINNFVWGVANRGASVRVGRDTEKDGKGYFEDRRPASNMD 366
Query: 734 PYSVIDALMRTCILNE 781
PY V + T IL E
Sbjct: 367 PYLVTAMIAETTILWE 382
>03_02_0210 -
6425708-6425863,6425955-6426114,6426204-6426295,
6426490-6426564,6426701-6426829,6427312-6427375,
6427761-6427867,6428795-6428843,6428955-6429058,
6429166-6429205,6429492-6429565
Length = 349
Score = 277 bits (678), Expect = 1e-74
Identities = 131/233 (56%), Positives = 158/233 (67%), Gaps = 1/233 (0%)
Frame = +2
Query: 80 PWFGIEQEYILLDSDLRXXXXXXXXXXXXXXXYYCGVGANKVFARDLVEAHYRCCLYAGV 259
PW+GIEQEY LL D+ YYC GA K F RD+V+AHY+ C+YAG+
Sbjct: 124 PWYGIEQEYTLLQKDVNWPLGWPGP-------YYCAAGAEKAFGRDIVDAHYKACIYAGI 176
Query: 260 PIAGTNAEVMPSQWEFQVGPSIGVHAGDDLWVARYILHRLAEEYGVIVTFDPKPVQ-DWN 436
I+G N EVMP QWEFQVGPS+G+ A D +WVARYIL R+ E GV+++ DPKP+ DWN
Sbjct: 177 NISGINGEVMPGQWEFQVGPSVGIAAADQVWVARYILERVTEVAGVVLSLDPKPIPGDWN 236
Query: 437 GSGAHTNFSTKKMRNDNGIIEIEKAIDKLSKVHMKHIKVYDPRGGKDNERRLTGLHETAS 616
G+GAHTNFSTK MR G I+KAIDKL+ H +HI Y G+ NERRLTG HETA
Sbjct: 237 GAGAHTNFSTKSMREPGGYEVIKKAIDKLALRHKEHIAAY----GEGNERRLTGRHETAD 292
Query: 617 INDFSAGVANRGSSIRIPRSVAEDXKGYLEDRRPASNCDPYSVIDALMRTCIL 775
IN F GVANRG+SIR+ R ++ KGY EDRRPASN DPY V + T +L
Sbjct: 293 INTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTGMIAETTLL 345
>04_04_1445 - 33658355-33658417,33658536-33658669,33659056-33659116,
33659197-33659356,33660032-33660081,33662237-33662290,
33662630-33662704,33662821-33662949,33663065-33663152,
33663266-33663372,33663513-33663561,33663657-33663760,
33663941-33663980,33664409-33664659,33664674-33664686,
33665846-33666355,33666437-33667657,33667973-33668221,
33668305-33668531
Length = 1194
Score = 252 bits (616), Expect = 3e-67
Identities = 134/266 (50%), Positives = 162/266 (60%), Gaps = 6/266 (2%)
Frame = +2
Query: 2 GRPMSQQKSNNRISCQEAYDKCKDDEPWFGIEQEYILLDSDLRXXXXXXXXXXXXXXX-Y 178
G P+ K NR + + K PWFGIEQEY LL D+ Y
Sbjct: 898 GEPIPTNK-RNRAAQVFSDPKVVSQVPWFGIEQEYTLLQRDVNWPLGWPVGGYPGPQGPY 956
Query: 179 YCGVGANKVFARDLVEAHYRCCLYAGVPIAGTNAEVMPSQWEFQVGPSIGVHAGDDLWVA 358
YC VG++K F RD+ +AHY+ CLYAG+ I+GTN EVMP QWE+QVGPS+G+ AGD +W++
Sbjct: 957 YCAVGSDKSFGRDISDAHYKACLYAGINISGTNGEVMPGQWEYQVGPSVGIEAGDHIWIS 1016
Query: 359 RYILHRLAEEYGVIVTFDPKPVQDWNGSGAHTNFS-----TKKMRNDNGIIEIEKAIDKL 523
RYIL R+ E+ GV++T DPKP+Q + TK MR D G I+KAI L
Sbjct: 1017 RYILERITEQAGVVLTLDPKPIQADSVICFVIRLRLILQITKSMREDGGFEVIKKAILNL 1076
Query: 524 SKVHMKHIKVYDPRGGKDNERRLTGLHETASINDFSAGVANRGSSIRIPRSVAEDXKGYL 703
S H HI Y G+ NERRLTGLHETASI++FS GVANRG SIR+ R KGYL
Sbjct: 1077 SLRHDLHISAY----GEGNERRLTGLHETASIDNFSWGVANRGCSIRVGRDTEAKGKGYL 1132
Query: 704 EDRRPASNCDPYSVIDALMRTCILNE 781
EDRRPASN DPY V L T IL E
Sbjct: 1133 EDRRPASNMDPYVVTALLAETTILWE 1158
>10_08_0249 +
16172811-16172987,16174048-16174299,16174426-16174505,
16174616-16174701,16174799-16174904,16174987-16175143,
16175220-16175315,16175797-16175845,16175946-16176205,
16176327-16176499,16176692-16176812,16176923-16176975,
16177088-16177217,16177371-16177516,16177887-16178075,
16178317-16178549,16178784-16178932,16179042-16179104
Length = 839
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/85 (29%), Positives = 43/85 (50%)
Frame = +2
Query: 209 ARDLVEAHYRCCLYAGVPIAGTNAEVMPSQWEFQVGPSIGVHAGDDLWVARYILHRLAEE 388
A +++ Y A + + +AE Q+E + + A D L AR I+ +A +
Sbjct: 560 ASSVLQEVYTSLKAAEIVVEQLHAESGKGQFEIALKYVLCTLAADKLIYAREIIKSVARK 619
Query: 389 YGVIVTFDPKPVQDWNGSGAHTNFS 463
+G++ TF PKP + GSG+H + S
Sbjct: 620 HGLLATFLPKPDLNDIGSGSHVHLS 644
>03_05_0174 + 21509202-21509690,21509696-21510133,21510176-21510643
Length = 464
Score = 31.5 bits (68), Expect = 0.86
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +2
Query: 317 PSIGVHAGDDLWVARYILHRLAEEY----GVIVTFDPKPVQDWNGSGAHT 454
P + DD V+RY+L R+ ++ GVIV DP V W HT
Sbjct: 9 PGLRFDPSDDELVSRYLLRRIQQKPLPLDGVIVDADPLSVPPWTPLADHT 58
>03_05_0440 +
24322332-24322388,24323478-24323615,24323654-24323736,
24325038-24325128,24326091-24326189,24326356-24326418,
24327182-24327259,24329354-24329543,24329812-24330065,
24330159-24330531,24331193-24331276,24332085-24332371,
24332495-24332542,24333194-24333220,24333951-24333987,
24334063-24334250,24334343-24334521,24334595-24334877,
24335481-24335717,24335798-24335988,24336552-24336561,
24336844-24336984,24337073-24337288,24338437-24338727,
24338852-24339025
Length = 1272
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -1
Query: 272 YRQSVRQHKDSIDSGLRQGL 213
YR+SVRQH + SG+R+GL
Sbjct: 782 YRESVRQHYAELRSGVREGL 801
>06_03_0954 -
26281937-26282143,26282232-26282286,26282430-26282482,
26282587-26282663,26282734-26282857,26282947-26283072,
26283463-26283616,26283709-26283817,26283911-26283974,
26284782-26284898
Length = 361
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/83 (24%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +2
Query: 437 GSGAHTNF--STKKMRNDNGIIEIEKAIDKLSKVH-MKHIKVYDPRGGKDNERRLTGLHE 607
G+ AH F + MR G E++ DK++++ M ++ PRG N++ E
Sbjct: 88 GNAAHKAFFRMDEMMRGQRGWRELQALGDKINQISGMIEGLIWSPRGSDSNDQHDDWAFE 147
Query: 608 TASINDFSAGVANRGSSIRIPRS 676
+DF+ + + I R+
Sbjct: 148 EGPHSDFAGPTCGSTACVAIVRN 170
>07_03_0252 - 15846143-15848473
Length = 776
Score = 28.7 bits (61), Expect = 6.1
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +2
Query: 317 PSIGVHAGDDLWVARYILHRLAEE----YGVIVTFDPKPVQDWNGSGAH 451
P + DD V+RY+L RL ++ +GVI DP W AH
Sbjct: 10 PGVRFDPADDELVSRYLLRRLRKQPIPLHGVIHEADPLGAPPWMLLAAH 58
>06_03_0481 - 21304802-21304920,21305063-21305131,21306140-21306557
Length = 201
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 141 GPRVVSPHRKGHTTAVSVPTKSLPETLSKPTIDAVF 248
GP++ + HR H A S P P T++ T+ F
Sbjct: 159 GPKIRTAHRTVHRLAFSAPLTLFPHTVTTTTLHFFF 194
>05_06_0125 - 25828093-25828911,25830398-25830530,25830644-25831062
Length = 456
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/26 (61%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = -1
Query: 227 LRQG-LWQRLCWHRHRSSMALA-VGG 156
LRQG WQRL W R +MA+A VGG
Sbjct: 114 LRQGGCWQRLRWRWRRFAMAVAGVGG 139
>06_01_0485 -
3444240-3444398,3444507-3444572,3444644-3444724,
3444823-3444900,3444980-3445075,3445363-3445405,
3445498-3445571,3445693-3445781,3445887-3445935,
3446171-3446227,3446309-3446425,3448633-3448698,
3449140-3449196,3449271-3449363,3449515-3449662,
3449753-3449902,3449979-3450181,3450319-3450438,
3450530-3450694,3450784-3450870,3450951-3451100,
3451225-3451365,3451399-3451569,3452015-3452091,
3452175-3452415,3452495-3452758,3452913-3453000,
3453099-3453481
Length = 1170
Score = 28.3 bits (60), Expect = 8.1
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = -1
Query: 314 RLGTPTVKASLQRLYRQSVRQHKDSIDSGLRQGLWQRLCWHRHRSSMALAVGGNHP 147
+LG V+ L R SV HKD I+S ++ W H S G P
Sbjct: 189 KLGGKVVERPQHMLMRVSVGIHKDDIESAIKTYHLMSQRWFTHASPTLFNAGTPRP 244
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,556,673
Number of Sequences: 37544
Number of extensions: 530846
Number of successful extensions: 1473
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1460
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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