Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_C13
         (867 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951...    30   2.8  
04_04_0706 + 27419215-27419371,27419521-27419734,27419818-274199...    29   4.8  

>03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,
            9515765-9516102,9516191-9516329,9517083-9517152,
            9517201-9517307,9517387-9517437,9517549-9517660,
            9517783-9517869,9517958-9518133,9518479-9518586,
            9518654-9518812,9518888-9518971,9519053-9519258,
            9519565-9519666,9519768-9519877,9519963-9520114,
            9520380-9520548,9520841-9520878,9521963-9522571,
            9523314-9523784,9523786-9523871,9524396-9524906,
            9525388-9525412,9526001-9526051,9526228-9526301,
            9526412-9526534,9526667-9526738,9526924-9527020,
            9527174-9527283
          Length = 1649

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -1

Query: 504  VEYAYLLNSCRVTLNSTMGLVTFS 433
            VE +Y+  SC+ TL +TM LVT S
Sbjct: 1424 VEKSYMCPSCKSTLTNTMSLVTIS 1447


>04_04_0706 +
           27419215-27419371,27419521-27419734,27419818-27419913,
           27420006-27420123,27420211-27420384,27420633-27420803,
           27420932-27420987,27421125-27421214,27421296-27421444,
           27421640-27421722,27421830-27421958,27422063-27422137,
           27422248-27422416,27422965-27423104,27423191-27423298,
           27423603-27423783,27424445-27424542,27424639-27424728,
           27424881-27425034,27425376-27425431,27425483-27425533,
           27425651-27425732,27425821-27425995,27426748-27426823,
           27426951-27427121,27427198-27427269,27427350-27427454,
           27427948-27428037,27428703-27428908,27428989-27429190,
           27429294-27429473,27429858-27429925,27430005-27430341,
           27430428-27430637,27430765-27431448,27431537-27431940,
           27432495-27432542,27432777-27433023,27433381-27433602,
           27433796-27434026
          Length = 2122

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +2

Query: 554 EFNYKMFKRLYEETGGSYESLDDGC 628
           EFN + F RLY E+   Y S DD C
Sbjct: 341 EFNIERFIRLYVESLVGYSSSDDSC 365


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,706,300
Number of Sequences: 37544
Number of extensions: 341510
Number of successful extensions: 717
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)