Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_C08
(794 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 165 4e-41
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 161 8e-40
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 160 1e-39
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 147 1e-35
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 3e-16
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 33 0.20
SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 28 7.6
SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34) 28 7.6
SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_44967| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38) 28 7.6
SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 28 7.6
SB_12316| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_155| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 28 7.6
SB_46071| Best HMM Match : RVP (HMM E-Value=3e-05) 28 7.6
SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37) 28 7.6
SB_28983| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_24726| Best HMM Match : Retrotrans_gag (HMM E-Value=6.6) 28 7.6
SB_23675| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 28 7.6
SB_19158| Best HMM Match : zf-CCHC (HMM E-Value=0.00067) 28 7.6
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 28 7.6
SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 165 bits (401), Expect = 4e-41
Identities = 81/138 (58%), Positives = 107/138 (77%)
Frame = +2
Query: 119 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 298
M V +E L+ AKL+EQ +RYD+MA MKEV+E +LS EERNLLSV+YKN+VG RRSS
Sbjct: 80 MMVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKYPKLSKEERNLLSVSYKNIVGQRRSS 139
Query: 299 WRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFY 478
WRVISSIE+KT S + K+Y+ +EKEL+++C +VLG+L++ LIP A + E+KVFY
Sbjct: 140 WRVISSIEEKTAESS-SLAIVKKYKACIEKELKDLCKEVLGILER-LIPGAEDEENKVFY 197
Query: 479 LKMKGDYYRYLAEVATGE 532
K+KGDYYRYLAE + G+
Sbjct: 198 FKLKGDYYRYLAEFSHGQ 215
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 161 bits (390), Expect = 8e-40
Identities = 83/153 (54%), Positives = 106/153 (69%), Gaps = 3/153 (1%)
Frame = +2
Query: 107 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGA 286
P+ +EEL+ AK+AEQAERYDDM AM VT+ G L++EERNLLSVAYKNVVGA
Sbjct: 3 PNFVSKCSREELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLNDEERNLLSVAYKNVVGA 62
Query: 287 RRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKAS---N 457
RRSSWRVISS+EQK E + K+YR + EL C +VL +L+ +L+ N
Sbjct: 63 RRSSWRVISSMEQK--APEEMAALTKKYREDITNELNGKCAEVLDILENYLLKDGQDDIN 120
Query: 458 PESKVFYLKMKGDYYRYLAEVATGETRH*SIPR 556
E+KVFYLKM+GDY+RYL EVA G++R +I +
Sbjct: 121 TEAKVFYLKMRGDYHRYLVEVAEGDSRKENIEK 153
Score = 128 bits (308), Expect = 7e-30
Identities = 65/101 (64%), Positives = 77/101 (76%)
Frame = +3
Query: 492 EITTGTLQKWPQEKPDIKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKAC 671
E+ G +K EK +AY+DA ++ P+HPIRLGLALNFSVFYYEI N P +AC
Sbjct: 140 EVAEGDSRKENIEKSR-EAYKDA-SAKAEELSPSHPIRLGLALNFSVFYYEIENKPPEAC 197
Query: 672 QLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRXNLTLWTS 794
+LAK+AFDDAIA LD L ++SYKDSTLIMQLLR NLTLWTS
Sbjct: 198 KLAKEAFDDAIAVLDNLKDESYKDSTLIMQLLRDNLTLWTS 238
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 160 bits (389), Expect = 1e-39
Identities = 80/117 (68%), Positives = 88/117 (75%)
Frame = +2
Query: 188 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKE 367
MA AMKE TE L EERNLLSVAYKNVVGA+RSSWRVISSIEQK EGSERK+Q +
Sbjct: 1 MAKAMKEATEISETLEQEERNLLSVAYKNVVGAKRSSWRVISSIEQKLEGSERKKQNTET 60
Query: 368 YRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETR 538
YR +E EL E+C VL LL+ LIP A + ESKVFYLKMKGDYYRY EVA + R
Sbjct: 61 YRQTIENELNEVCETVLKLLESKLIPNAQSTESKVFYLKMKGDYYRYEGEVAGADRR 117
Score = 126 bits (305), Expect = 2e-29
Identities = 60/84 (71%), Positives = 70/84 (83%)
Frame = +3
Query: 543 KAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTL 722
K ++A E K+ PT PIRLGLALNFSVF+YEI + ++AC+LAKQAFDDAIAELD+L
Sbjct: 217 KEAKEAAETGDGKLAPTDPIRLGLALNFSVFHYEIQENQEEACKLAKQAFDDAIAELDSL 276
Query: 723 NEDSYKDSTLIMQLLRXNLTLWTS 794
NED YKDSTLIMQLLR NLTLW+S
Sbjct: 277 NEDQYKDSTLIMQLLRDNLTLWSS 300
Score = 121 bits (291), Expect = 8e-28
Identities = 60/84 (71%), Positives = 70/84 (83%), Gaps = 2/84 (2%)
Frame = +3
Query: 540 IKAYQDAFEISKA--KMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAEL 713
+KAY +A EI++ K+ PT PIRLGLALNFSVFYYEI+ +AC LAK+AFDDAIAEL
Sbjct: 125 MKAYSEAQEIAEKDPKLPPTDPIRLGLALNFSVFYYEIVEDSKQACDLAKKAFDDAIAEL 184
Query: 714 DTLNEDSYKDSTLIMQLLRXNLTL 785
DTL+ED YKDSTLIMQLLR NLT+
Sbjct: 185 DTLSEDQYKDSTLIMQLLRDNLTV 208
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 147 bits (356), Expect = 1e-35
Identities = 75/123 (60%), Positives = 93/123 (75%), Gaps = 3/123 (2%)
Frame = +2
Query: 128 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 307
DKEE V AKLAEQAERYDDM +MKEV + G ELS E+RNLLSVAYKNV+GARR+SWR+
Sbjct: 3 DKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGTELSTEDRNLLSVAYKNVIGARRASWRI 62
Query: 308 ISSIEQKTE--GSE-RKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFY 478
I+SIEQK E G + K +M + YR +E+EL+ IC ++L LLD LI + + ESKVFY
Sbjct: 63 ITSIEQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSLLDDSLIKNSQSEESKVFY 122
Query: 479 LKM 487
K+
Sbjct: 123 NKI 125
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 83.0 bits (196), Expect = 3e-16
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Frame = +2
Query: 119 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 298
M + ELVQ AKLAEQ ER++D+ MK+ E L+ E RNLLSV YKNVVG++R +
Sbjct: 186 MQDSRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNKEHRNLLSVGYKNVVGSKRFA 245
Query: 299 WRVISSIEQKTEGSERKQQMAK--EYRVKVEKELREICYDVL 418
WR + ++ R Q+ +Y+ K+E EL+ +C ++L
Sbjct: 246 WRHLHHDALQSGRYIRDSQLKGIIKYKEKIEMELKTLCREIL 287
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 33.5 bits (73), Expect = 0.20
Identities = 23/86 (26%), Positives = 40/86 (46%)
Frame = +2
Query: 131 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVI 310
KE+ AK ++ ER + A K+ E + EE++ L K R+ +
Sbjct: 339 KEKERLEAKQKKEQERLEKQAEKEKKEKERLEKKQREEKDRLEKKEKKEEEKRKKEEEIN 398
Query: 311 SSIEQKTEGSERKQQMAKEYRVKVEK 388
+ IE+K + E+K+Q +E K E+
Sbjct: 399 AKIEEKKKREEKKKQEEEEKMKKKEQ 424
>SB_42068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3367
Score = 29.9 bits (64), Expect = 2.5
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Frame = +2
Query: 116 TMSVDKEELVQRAKLAEQAERY---DDMAAAMKEVTETGVELSNE-ERNLLSVAYKNVVG 283
++S+ +EL + LA Q + D A K+VT ++ + E R + +
Sbjct: 3123 SLSLKSQELEAKNALANQKLKQMVKDQQEAEKKKVTSMEIQTTIETHRKQTIIEMVSCAA 3182
Query: 284 ARRSSWR--------VISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHL 439
R S++ + SS++++T+ + KQQ + +VE + E V G+ +HL
Sbjct: 3183 CLRKSYQESAFLDLLITSSLQKQTKQIKEKQQAVMKDLAQVEPAVDEARQAVKGIKKQHL 3242
Query: 440 I 442
+
Sbjct: 3243 V 3243
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/100 (22%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Frame = +2
Query: 107 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLL-SVAYKNVVG 283
PSS S DK+E+ +++ +++++ ++A K + E ++S + S+ K +
Sbjct: 1066 PSSRSSHDKDEISEKSNPSDKSD--VEVARKNKHMPEALYKISETISGMNDSITLKEPLK 1123
Query: 284 ARRSSWR--VISSIEQKTEGSERKQQMAKEYRVKVEKELR 397
A+ R ++ + E +R+ + K++R++ EK+ R
Sbjct: 1124 AKDGDGRNKEEQELKDRMENEKREDTIRKQHRLQWEKKAR 1163
>SB_11347| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1234
Score = 29.5 bits (63), Expect = 3.3
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 6/115 (5%)
Frame = +2
Query: 131 KEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGAR------R 292
++ L + K A +R +A+A+ + + + LS K VV + +
Sbjct: 279 QKTLSEMFKQAVTEDRPKMLASAITKALNQDIHSPSALNLPLSTPAKQVVKTKWDRIREK 338
Query: 293 SSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 457
W ++S E+ +ER++Q E +VK E++ R+ ++ + HL K SN
Sbjct: 339 HQWNLLSEDEKNKIKAERRKQKRLELKVKREEKERKRLEELKRVSFAHLGMKLSN 393
>SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39)
Length = 1510
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 528 EKPDIKAYQDAFEISKAKMQPTHPIRLGLALNF-SVFYYEILNSPDKACQLAKQAFDDAI 704
EKPD K Y+D +I + P P+ + NF + F ++ D QL K +
Sbjct: 61 EKPDTKTYKDLVDILSGHLHP-KPLVIAERFNFHNRFRHDSETVADFGAQLKKLS---TH 116
Query: 705 AELDTLNEDSYKD 743
E T +++ +D
Sbjct: 117 CEFGTFQDEALRD 129
>SB_47927| Best HMM Match : TSP_1 (HMM E-Value=9.5e-34)
Length = 512
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 149 RAKLAEQAERYDDMAAAM-KEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQ 325
+ K+ +++E+YD + + KE T+ G + E + N AR + ++ +
Sbjct: 13 KRKIFKKSEKYDRLEEPLEKEGTDGGEIEAEAEVEPHTEEEANYNEARSENCEKNNNNDS 72
Query: 326 KTEGSERKQQMAKEYRVKVEKELRE 400
T ++ +Q KE+ V +EK+L++
Sbjct: 73 STPDAKSQQADIKEWIVSLEKQLKD 97
>SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 528 EKPDIKAYQDAFEISKAKMQPTHPIRLGLALNF-SVFYYEILNSPDKACQLAKQAFDDAI 704
EKPD K Y+D +I + P P+ + NF + F ++ D QL K +
Sbjct: 152 EKPDTKTYKDLVDILSGHLHP-KPLVIAERFNFHNRFRHDSETVADFGAQLKKLS---TH 207
Query: 705 AELDTLNEDSYKD 743
E T +++ +D
Sbjct: 208 CEFGTFQDEALRD 220
>SB_44967| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1284
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 528 EKPDIKAYQDAFEISKAKMQPTHPIRLGLALNF-SVFYYEILNSPDKACQLAKQAFDDAI 704
EKPD K Y+D +I + P P+ + NF + F ++ D QL K +
Sbjct: 206 EKPDTKTYKDLVDILSGHLHP-KPLVIAERFNFHNRFRHDSETVADFGAQLKKLS---TH 261
Query: 705 AELDTLNEDSYKD 743
E T +++ +D
Sbjct: 262 CEFGTFQDEALRD 274
>SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38)
Length = 1425
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 528 EKPDIKAYQDAFEISKAKMQPTHPIRLGLALNF-SVFYYEILNSPDKACQLAKQAFDDAI 704
EKPD K Y+D +I + P P+ + NF + F ++ D QL K +
Sbjct: 730 EKPDTKTYKDLVDILSGHLHP-KPLVIAERFNFHNRFRHDSETVADFGAQLKKLS---TH 785
Query: 705 AELDTLNEDSYKD 743
E T +++ +D
Sbjct: 786 CEFGTFQDEALRD 798
>SB_15135| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 794
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 528 EKPDIKAYQDAFEISKAKMQPTHPIRLGLALNF-SVFYYEILNSPDKACQLAKQAFDDAI 704
EKPD K Y+D +I + P P+ + NF + F ++ D QL K +
Sbjct: 196 EKPDTKTYKDLVDILSGHLHP-KPLVIAERFNFHNRFRHDSETVADFGAQLKKLS---TH 251
Query: 705 AELDTLNEDSYKD 743
E T +++ +D
Sbjct: 252 CEFGTFQDEALRD 264
>SB_12316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 28.3 bits (60), Expect = 7.6
Identities = 26/101 (25%), Positives = 48/101 (47%)
Frame = +2
Query: 98 SSLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNV 277
+ L S+ +D+E R +++++ RY + A MK V E + ++E + +
Sbjct: 537 TGLDSNLSKLDQEVRGLREEISQEESRYHYLHAMMK-VLEIQQKRIDDEMKAYTAQDQ-- 593
Query: 278 VGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELRE 400
R+ SWR EQ T + ++ + K R K +K +RE
Sbjct: 594 -ADRKKSWR-----EQYTRKIQEQENLGKSLREK-QKAVRE 627
>SB_155| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 296
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 528 EKPDIKAYQDAFEISKAKMQPTHPIRLGLALNF-SVFYYEILNSPDKACQLAKQAFDDAI 704
EKPD K Y+D +I + P P+ + NF + F ++ D QL K +
Sbjct: 61 EKPDTKTYKDLVDILSGHLHP-KPLVIAERFNFHNRFRHDSETVADFGAQLKKLS---TH 116
Query: 705 AELDTLNEDSYKD 743
E T +++ +D
Sbjct: 117 CEFGTFQDEALRD 129
>SB_46071| Best HMM Match : RVP (HMM E-Value=3e-05)
Length = 403
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 528 EKPDIKAYQDAFEISKAKMQPTHPIRLGLALNF-SVFYYEILNSPDKACQLAKQAFDDAI 704
EKPD K Y+D +I + P P+ + NF + F ++ D QL K +
Sbjct: 61 EKPDTKTYKDLVDILSGHLHP-KPLVIAERFNFHNRFRHDSETVADFGAQLKKLS---TH 116
Query: 705 AELDTLNEDSYKD 743
E T +++ +D
Sbjct: 117 CEFGTFQDEALRD 129
>SB_45108| Best HMM Match : RVT_1 (HMM E-Value=4.9e-37)
Length = 1122
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 528 EKPDIKAYQDAFEISKAKMQPTHPIRLGLALNF-SVFYYEILNSPDKACQLAKQAFDDAI 704
EKPD K Y+D +I + P P+ + NF + F ++ D QL K +
Sbjct: 77 EKPDTKTYKDLVDILSGHLHP-KPLVIAERFNFHNRFRHDSETVADFGAQLKKLS---TH 132
Query: 705 AELDTLNEDSYKD 743
E T +++ +D
Sbjct: 133 CEFGTFQDEALRD 145
>SB_28983| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 951
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 528 EKPDIKAYQDAFEISKAKMQPTHPIRLGLALNF-SVFYYEILNSPDKACQLAKQAFDDAI 704
EKPD K Y+D +I + P P+ + NF + F ++ D QL K +
Sbjct: 347 EKPDTKTYKDLVDILSGHLHP-KPLVIAERFNFHNRFRHDSETVADFGAQLKKLS---TH 402
Query: 705 AELDTLNEDSYKD 743
E T +++ +D
Sbjct: 403 CEFGTFQDEALRD 415
>SB_24726| Best HMM Match : Retrotrans_gag (HMM E-Value=6.6)
Length = 166
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 528 EKPDIKAYQDAFEISKAKMQPTHPIRLGLALNF-SVFYYEILNSPDKACQLAKQAFDDAI 704
EKPD K Y+D +I + P P+ + NF + F ++ D QL K +
Sbjct: 78 EKPDTKTYKDLVDILSGHLHP-KPLVIAERFNFHNRFRHDSETVADFGAQLKKLS---TH 133
Query: 705 AELDTLNEDSYKD 743
E T +++ +D
Sbjct: 134 CEFGTFQDEALRD 146
>SB_23675| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 342
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 528 EKPDIKAYQDAFEISKAKMQPTHPIRLGLALNF-SVFYYEILNSPDKACQLAKQAFDDAI 704
EKPD K Y+D +I + P P+ + NF + F ++ D QL K +
Sbjct: 34 EKPDTKTYKDLVDILSGHLHP-KPLVIAERFNFHNRFRHDSETVADFGAQLKKLS---TH 89
Query: 705 AELDTLNEDSYKD 743
E T +++ +D
Sbjct: 90 CEFGTFQDEALRD 102
>SB_19158| Best HMM Match : zf-CCHC (HMM E-Value=0.00067)
Length = 369
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 528 EKPDIKAYQDAFEISKAKMQPTHPIRLGLALNF-SVFYYEILNSPDKACQLAKQAFDDAI 704
EKPD K Y+D +I + P P+ + NF + F ++ D QL K +
Sbjct: 61 EKPDTKTYKDLVDILSGHLHP-KPLVIAERFNFHNRFRHDSETVADFGAQLKKLS---TH 116
Query: 705 AELDTLNEDSYKD 743
E T +++ +D
Sbjct: 117 CEFGTFQDEALRD 129
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 302 RVISSIEQKTEGSERKQQMAKEYRVKVEKELREIC 406
R++ IE+K E E ++ AKE + + E+E + IC
Sbjct: 919 RIMKEIEEK-EKKEEAERKAKEEKEREERERKRIC 952
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 28.3 bits (60), Expect = 7.6
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +2
Query: 347 KQQMAKEYRVKVEKELREICYDVLGLLDKHLIPK 448
K++M ++Y K+EKE+ Y+++ L K ++ K
Sbjct: 292 KEEMKEKYDGKIEKEMSGAIYEIISRLMKAVVGK 325
>SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +3
Query: 528 EKPDIKAYQDAFEISKAKMQPTHPIRLGLALNF-SVFYYEILNSPDKACQLAKQAFDDAI 704
EKPD K Y+D +I + P P+ + NF + F ++ D QL K +
Sbjct: 282 EKPDTKTYKDLVDILSGHLHP-KPLVIAERFNFHNRFRHDSETVADFGAQLKKLS---TH 337
Query: 705 AELDTLNEDSYKD 743
E T +++ +D
Sbjct: 338 CEFGTFQDEALRD 350
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,755,931
Number of Sequences: 59808
Number of extensions: 480690
Number of successful extensions: 1518
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1514
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2191792647
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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