Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_C07
         (869 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    29   0.063
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   4.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.5  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   7.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   7.2  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   7.2  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   9.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   9.5  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   9.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.5  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 28.7 bits (61), Expect = 0.063
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 559 YAHTPGTTIELTCEAAGSPAPSVHWFKND 645
           +++T G  +E  C A G+P P + W ++D
Sbjct: 35  FSNTTGAVVE--CSAHGNPTPDIIWVRSD 61



 Score = 28.7 bits (61), Expect = 0.063
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 571 PGTTIELTCEAAGSPAPSVHW 633
           PG ++ L C A+G+P P + W
Sbjct: 427 PGNSVFLKCIASGNPTPEITW 447



 Score = 27.1 bits (57), Expect = 0.19
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 583 IELTCEAAGSPAPSVHWFK 639
           + L C A G P+PS  W+K
Sbjct: 250 VALLCPAQGFPSPSFRWYK 268



 Score = 25.4 bits (53), Expect = 0.59
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +1

Query: 574 GTTIELTCEAAGSPAPSVHWFKNDSPV 654
           G     TC   G+P  ++ W K+  P+
Sbjct: 342 GRPATFTCNFEGNPIKTISWLKDGHPI 368



 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 562 AHTPGTTIELTCEAAGSPAPSVHW 633
           A   G+   + C+A G P P V W
Sbjct: 709 AFAQGSDAAVECKADGFPRPVVTW 732



 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 574 GTTIELTCEAAGSPAPSVHW 633
           G T+ + C  AG P  SV W
Sbjct: 525 GGTLIVHCPFAGHPVDSVVW 544


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 258 ITLPNNETNLSLMKYCS*YFCYKFKW 181
           I LP  E NL  +K C  YF   F W
Sbjct: 132 INLPFLEHNLIRLKNCVIYFNRIFGW 157


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 578 VPGVCAYDGRGPCVIDKYL 522
           VPGV A   R PC I++ L
Sbjct: 197 VPGVVAMFSRKPCSINENL 215


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 578 VPGVCAYDGRGPCVIDKYL 522
           VPGV A   R PC I++ L
Sbjct: 197 VPGVVAMFSRKPCSINENL 215


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 697 PTSIARISSTLI 732
           PTS+ +ISSTL+
Sbjct: 75  PTSVTKISSTLL 86


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
 Frame = +1

Query: 484 IENGVQAKSDGSH--KYLSITQGPLPSYAHTPGTTIELTCEAA 606
           I+ G +A  +G +  KYL + +     Y H P T  E    AA
Sbjct: 429 IKFGRKADPNGDYIRKYLPVLKNMPSQYIHEPWTAPEQVQRAA 471


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 11/37 (29%), Positives = 16/37 (43%)
 Frame = +1

Query: 448 KHIKLLSDIDNSIENGVQAKSDGSHKYLSITQGPLPS 558
           K I+  S IDN   NG   +    H+   +   P P+
Sbjct: 218 KRIEEKSQIDNLFHNGFMQEQSTHHQGQLVVGLPAPT 254


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 130 CTCAIRIVR*GCASPRPKVIDVRNSLKK 47
           C  A+ I+   C   R +V+ + N LKK
Sbjct: 299 CVVALIILILQCGRVRSEVVKILNVLKK 326


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 130 CTCAIRIVR*GCASPRPKVIDVRNSLKK 47
           C  A+ I+   C   R +V+ + N LKK
Sbjct: 225 CVVALIILILQCGRVRSEVVKILNVLKK 252


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 155 LEHKFEIRMHVCDPDRSIGL 96
           ++H   +R   CDPDR + L
Sbjct: 174 VKHLERLREERCDPDRPLPL 193


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 353 DSRRKNSKAPSGDEISPS 300
           D  ++N K+PS  + SPS
Sbjct: 688 DKSKQNEKSPSPQQRSPS 705


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,191
Number of Sequences: 336
Number of extensions: 3803
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)